RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	MAGEA12	P43365	314 aa		1.19	□□□□□ -2.22
RAP1B-231	ENST00000544639	CTBP2	P56545	445 aa		1.19	□□□□□ -2.22
RAP1B-231	ENST00000544639	CXCR4	P61073	352 aa		1.19	□□□□□ -2.22
RAP1B-231	ENST00000544639	SKP1	P63208	163 aa		1.19	□□□□□ -2.22
RAP1B-231	ENST00000544639	LYZL1	Q6UWQ5	148 aa		1.19	□□□□□ -2.22
RAP1B-231	ENST00000544639	DNAJB3	Q8WWF6	145 aa		1.19	□□□□□ -2.22
RAP1B-231	ENST00000544639	ANKRD36BP1	Q96IX9	119 aa		1.19	□□□□□ -2.22
RAP1B-231	ENST00000544639	C8orf4	Q9NR00	106 aa		1.19	□□□□□ -2.22
RAP1B-231	ENST00000544639	RERE	Q9P2R6	1566 aa		1.18	□□□□□ -2.22
RAP1B-231	ENST00000544639	SIPA1L1	O43166	1804 aa		1.18	□□□□□ -2.22
RAP1B-231	ENST00000544639	KLRC4	O43908	158 aa		1.18	□□□□□ -2.22
RAP1B-231	ENST00000544639	ZNF737	O75373	536 aa		1.18	□□□□□ -2.22
RAP1B-231	ENST00000544639	TAS2R20	P59543	309 aa		1.18	□□□□□ -2.22
RAP1B-231	ENST00000544639	TMEM155	Q4W5P6	130 aa		1.18	□□□□□ -2.22
RAP1B-231	ENST00000544639	SAPCD1	Q5SSQ6	148 aa		1.18	□□□□□ -2.22
RAP1B-231	ENST00000544639	TMEM42	Q69YG0	159 aa		1.18	□□□□□ -2.22
RAP1B-231	ENST00000544639	NAA40	Q86UY6	237 aa		1.18	□□□□□ -2.22
RAP1B-231	ENST00000544639	RAB2B	Q8WUD1	216 aa		1.18	□□□□□ -2.22
RAP1B-231	ENST00000544639	SLC7A6	Q92536	515 aa		1.18	□□□□□ -2.22
RAP1B-231	ENST00000544639	DHRS9	Q9BPW9	319 aa		1.18	□□□□□ -2.22
RAP1B-231	ENST00000544639	IMP3	Q9NV31	184 aa	Known RBP	1.18	□□□□□ -2.22
RAP1B-231	ENST00000544639	RBM7	Q9Y580	266 aa	Known RBP	1.18	□□□□□ -2.22
RAP1B-231	ENST00000544639	MYH11	P35749	1972 aa		1.17	□□□□□ -2.22
RAP1B-231	ENST00000544639	PCDH15	Q96QU1	1955 aa		1.17	□□□□□ -2.22
RAP1B-231	ENST00000544639		F5H768	121 aa		1.17	□□□□□ -2.22
RAP1B-231	ENST00000544639	APOM	O95445	188 aa		1.17	□□□□□ -2.22
RAP1B-231	ENST00000544639	LYNX1	P0DP58	116 aa		1.17	□□□□□ -2.22
RAP1B-231	ENST00000544639	DDT	P30046	118 aa		1.17	□□□□□ -2.22
RAP1B-231	ENST00000544639	CA5A	P35218	305 aa		1.17	□□□□□ -2.22
RAP1B-231	ENST00000544639	PLEKHG7	Q6ZR37	379 aa		1.17	□□□□□ -2.22
RAP1B-231	ENST00000544639	RASSF6	Q6ZTQ3	369 aa		1.17	□□□□□ -2.22
RAP1B-231	ENST00000544639	TMEM251	Q8N6I4	163 aa		1.17	□□□□□ -2.22
RAP1B-231	ENST00000544639	GNPNAT1	Q96EK6	184 aa	Predicted RBP	1.17	□□□□□ -2.22
RAP1B-231	ENST00000544639	KCTD7	Q96MP8	289 aa		1.17	□□□□□ -2.22
RAP1B-231	ENST00000544639	IMMP2L	Q96T52	175 aa		1.17	□□□□□ -2.22
RAP1B-231	ENST00000544639	CCL13	Q99616	98 aa		1.17	□□□□□ -2.22
RAP1B-231	ENST00000544639	DOHH	Q9BU89	302 aa		1.17	□□□□□ -2.22
RAP1B-231	ENST00000544639	UPF3B	Q9BZI7	483 aa	Known RBP	1.17	□□□□□ -2.22
RAP1B-231	ENST00000544639	CYSTM1	Q9H1C7	97 aa		1.17	□□□□□ -2.22
RAP1B-231	ENST00000544639	ZNHIT6	Q9NWK9	470 aa	Known RBP	1.17	□□□□□ -2.22
RAP1B-231	ENST00000544639	CFAP45	Q9UL16	551 aa		1.17	□□□□□ -2.22
RAP1B-231	ENST00000544639	PTPRS	Q13332	1948 aa		1.17	□□□□□ -2.22
RAP1B-231	ENST00000544639	IGHV1-18	A0A0C4DH31	117 aa		1.16	□□□□□ -2.22
RAP1B-231	ENST00000544639		A0A1B0GW54	56 aa		1.16	□□□□□ -2.22
RAP1B-231	ENST00000544639	COCH	O43405	550 aa		1.16	□□□□□ -2.22
RAP1B-231	ENST00000544639	HLA-DRA	P01903	254 aa		1.16	□□□□□ -2.22
RAP1B-231	ENST00000544639	TPI1	P60174	286 aa		1.16	□□□□□ -2.22
RAP1B-231	ENST00000544639	KRTAP10-4	P60372	401 aa	Predicted RBP	1.16	□□□□□ -2.22
RAP1B-231	ENST00000544639	SBSN	Q6UWP8	590 aa		1.16	□□□□□ -2.22
RAP1B-231	ENST00000544639	ZNF705A	Q6ZN79	300 aa	Predicted RBP	1.16	□□□□□ -2.22
RAP1B-231	ENST00000544639	KTN1-AS1	Q86SY8	53 aa		1.16	□□□□□ -2.22
RAP1B-231	ENST00000544639		Q8N402	240 aa		1.16	□□□□□ -2.22
RAP1B-231	ENST00000544639	HAVCR2	Q8TDQ0	301 aa		1.16	□□□□□ -2.22
RAP1B-231	ENST00000544639	EEF1AKMT1	Q8WVE0	214 aa		1.16	□□□□□ -2.22
RAP1B-231	ENST00000544639	RNF133	Q8WVZ7	376 aa		1.16	□□□□□ -2.22
RAP1B-231	ENST00000544639	PLEKHJ1	Q9NW61	149 aa		1.16	□□□□□ -2.22
RAP1B-231	ENST00000544639	TIMM9	Q9Y5J7	89 aa		1.16	□□□□□ -2.22
RAP1B-231	ENST00000544639	INTS1	Q8N201	2190 aa	Known RBP	1.15	□□□□□ -2.22
RAP1B-231	ENST00000544639		A0A0J9YW62	118 aa		1.15	□□□□□ -2.23
RAP1B-231	ENST00000544639	GOLGA8K	D6RF30	607 aa		1.15	□□□□□ -2.23
RAP1B-231	ENST00000544639	GOLGA8M	H3BSY2	632 aa		1.15	□□□□□ -2.23
RAP1B-231	ENST00000544639	COX7A2L	O14548	114 aa		1.15	□□□□□ -2.23
RAP1B-231	ENST00000544639	ITGB1BP1	O14713	200 aa		1.15	□□□□□ -2.23
RAP1B-231	ENST00000544639	IL3	P08700	152 aa		1.15	□□□□□ -2.23
RAP1B-231	ENST00000544639	PSMB8	P28062	276 aa		1.15	□□□□□ -2.23
RAP1B-231	ENST00000544639	SLCO1A2	P46721	670 aa		1.15	□□□□□ -2.23
RAP1B-231	ENST00000544639	EMP1	P54849	157 aa		1.15	□□□□□ -2.23
RAP1B-231	ENST00000544639	AP1S1	P61966	158 aa		1.15	□□□□□ -2.23
RAP1B-231	ENST00000544639	LRRC75B	Q2VPJ9	315 aa		1.15	□□□□□ -2.23
RAP1B-231	ENST00000544639	PDPK2P	Q6A1A2	396 aa		1.15	□□□□□ -2.23
RAP1B-231	ENST00000544639	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	1.15	□□□□□ -2.23
RAP1B-231	ENST00000544639	UBL4B	Q8N7F7	174 aa		1.15	□□□□□ -2.23
RAP1B-231	ENST00000544639	JOSD2	Q8TAC2	188 aa		1.15	□□□□□ -2.23
RAP1B-231	ENST00000544639	TMA16	Q96EY4	203 aa	Known RBP	1.15	□□□□□ -2.23
RAP1B-231	ENST00000544639	HSPB9	Q9BQS6	159 aa		1.15	□□□□□ -2.23
RAP1B-231	ENST00000544639	HRASLS	Q9HDD0	168 aa		1.15	□□□□□ -2.23
RAP1B-231	ENST00000544639	CPAMD8	Q8IZJ3	1885 aa		1.15	□□□□□ -2.23
RAP1B-231	ENST00000544639	DIDO1	Q9BTC0	2240 aa	Known RBP	1.15	□□□□□ -2.23
RAP1B-231	ENST00000544639	NUP160	Q12769	1436 aa		1.15	□□□□□ -2.23
RAP1B-231	ENST00000544639	TRAV7	A0A075B6U4	112 aa		1.14	□□□□□ -2.23
RAP1B-231	ENST00000544639		H7C2G1	150 aa		1.14	□□□□□ -2.23
RAP1B-231	ENST00000544639	CIAO1	O76071	339 aa		1.14	□□□□□ -2.23
RAP1B-231	ENST00000544639	SERPINA7	P05543	415 aa		1.14	□□□□□ -2.23
RAP1B-231	ENST00000544639	LGALS1	P09382	135 aa	Known RBP	1.14	□□□□□ -2.23
RAP1B-231	ENST00000544639	CCL5	P13501	91 aa		1.14	□□□□□ -2.23
RAP1B-231	ENST00000544639	CD40LG	P29965	261 aa		1.14	□□□□□ -2.23
RAP1B-231	ENST00000544639	CDC34	P49427	236 aa	Predicted RBP	1.14	□□□□□ -2.23
RAP1B-231	ENST00000544639	AKR1C1	Q04828	323 aa		1.14	□□□□□ -2.23
RAP1B-231	ENST00000544639	PPP1R1A	Q13522	171 aa		1.14	□□□□□ -2.23
RAP1B-231	ENST00000544639	OR2T27	Q8NH04	317 aa		1.14	□□□□□ -2.23
RAP1B-231	ENST00000544639	CMTM5	Q96DZ9	223 aa		1.14	□□□□□ -2.23
RAP1B-231	ENST00000544639		Q96M85	177 aa		1.14	□□□□□ -2.23
RAP1B-231	ENST00000544639	KIF15	Q9NS87	1388 aa		1.13	□□□□□ -2.23
RAP1B-231	ENST00000544639	TRBV6-5	A0A0K0K1A5	114 aa		1.13	□□□□□ -2.23
RAP1B-231	ENST00000544639	TMEM269	A0A1B0GVZ9	245 aa		1.13	□□□□□ -2.23
RAP1B-231	ENST00000544639	HMSD	A8MTL9	139 aa		1.13	□□□□□ -2.23
RAP1B-231	ENST00000544639		H3BT86	120 aa		1.13	□□□□□ -2.23
RAP1B-231	ENST00000544639	CREBL2	O60519	120 aa	Predicted RBP	1.13	□□□□□ -2.23
RAP1B-231	ENST00000544639	REG1A	P05451	166 aa		1.13	□□□□□ -2.23
RAP1B-231	ENST00000544639	TFPT	P0C1Z6	253 aa		1.13	□□□□□ -2.23

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms