RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 SNAPC3Q92966 411 aa18.03■□□□□ 0.48
CHFR-222ENST00000544093 PHB2Q99623 299 aa18.03■□□□□ 0.48
CHFR-222ENST00000544093 AIFM2Q9BRQ8 373 aa18.03■□□□□ 0.48
CHFR-222ENST00000544093 ZNF355PQ9NSJ1 428 aa18.03■□□□□ 0.48
CHFR-222ENST00000544093 TNCP24821 2201 aa18.03■□□□□ 0.48
CHFR-222ENST00000544093 LINC01619G3V211 115 aa18.02■□□□□ 0.48
CHFR-222ENST00000544093 PTHLHP12272 177 aa18.02■□□□□ 0.48
CHFR-222ENST00000544093 PRSS3P35030 304 aa18.02■□□□□ 0.48
CHFR-222ENST00000544093 TAS2R46P59540 309 aa18.02■□□□□ 0.48
CHFR-222ENST00000544093 RPL30P62888 115 aaKnown RBP18.02■□□□□ 0.48
CHFR-222ENST00000544093 MFSD4AQ8N468 514 aa18.02■□□□□ 0.48
CHFR-222ENST00000544093 CASTOR1Q8WTX7 329 aa18.02■□□□□ 0.48
CHFR-222ENST00000544093 AP3S1Q92572 193 aa18.02■□□□□ 0.48
CHFR-222ENST00000544093 MS4A10Q96PG2 267 aa18.02■□□□□ 0.48
CHFR-222ENST00000544093 TAS2R8Q9NYW2 309 aa18.02■□□□□ 0.48
CHFR-222ENST00000544093 COMMD3Q9UBI1 195 aa18.02■□□□□ 0.48
CHFR-222ENST00000544093 ANAPC10Q9UM13 185 aa18.02■□□□□ 0.48
CHFR-222ENST00000544093 GABARAPO95166 117 aa18.01■□□□□ 0.47
CHFR-222ENST00000544093 SAA1P0DJI8 122 aaPredicted RBP18.01■□□□□ 0.47
CHFR-222ENST00000544093 SMIM18P0DKX4 95 aa18.01■□□□□ 0.47
CHFR-222ENST00000544093 CATR1Q13166 79 aa18.01■□□□□ 0.47
CHFR-222ENST00000544093 TNXAQ16473 311 aa18.01■□□□□ 0.47
CHFR-222ENST00000544093 SRSF12Q8WXF0 261 aaKnown RBP18.01■□□□□ 0.47
CHFR-222ENST00000544093 RHOVQ96L33 236 aa18.01■□□□□ 0.47
CHFR-222ENST00000544093 MRPS26Q9BYN8 205 aaKnown RBP18.01■□□□□ 0.47
CHFR-222ENST00000544093 SLC5A7Q9GZV3 580 aa18.01■□□□□ 0.47
CHFR-222ENST00000544093 C13orf42A0A1B0GVH6 325 aa18■□□□□ 0.47
CHFR-222ENST00000544093 MEIS3P1A6NDR6 274 aa18■□□□□ 0.47
CHFR-222ENST00000544093 K7EIL1 84 aa18■□□□□ 0.47
CHFR-222ENST00000544093 HRASP01112 189 aa18■□□□□ 0.47
CHFR-222ENST00000544093 HSPB1P04792 205 aaKnown RBP18■□□□□ 0.47
CHFR-222ENST00000544093 HERV-K104P61576 105 aa18■□□□□ 0.47
CHFR-222ENST00000544093 MRGPRG-AS1Q2M3A8 158 aa18■□□□□ 0.47
CHFR-222ENST00000544093 OR2B11Q5JQS5 317 aa18■□□□□ 0.47
CHFR-222ENST00000544093 ASPHD1Q5U4P2 390 aa18■□□□□ 0.47
CHFR-222ENST00000544093 MZT2AQ6P582 158 aa18■□□□□ 0.47
CHFR-222ENST00000544093 IDO2Q6ZQW0 420 aa18■□□□□ 0.47
CHFR-222ENST00000544093 OR5T1Q8NG75 326 aa18■□□□□ 0.47
CHFR-222ENST00000544093 SPIN2AQ99865 258 aa18■□□□□ 0.47
CHFR-222ENST00000544093 SPIN2BQ9BPZ2 258 aa18■□□□□ 0.47
CHFR-222ENST00000544093 ZNF430Q9H8G1 570 aaPredicted RBP18■□□□□ 0.47
CHFR-222ENST00000544093 SCPEP1Q9HB40 452 aa18■□□□□ 0.47
CHFR-222ENST00000544093 CCL28Q9NRJ3 127 aa18■□□□□ 0.47
CHFR-222ENST00000544093 MSGN1A6NI15 193 aa17.99■□□□□ 0.47
CHFR-222ENST00000544093 RBFOX2O43251 390 aaKnown RBP eCLIP17.99■□□□□ 0.47
CHFR-222ENST00000544093 OR2A4O95047 310 aa17.99■□□□□ 0.47
CHFR-222ENST00000544093 NAT1P18440 290 aa17.99■□□□□ 0.47
CHFR-222ENST00000544093 OR2A7Q96R45 310 aa17.99■□□□□ 0.47
CHFR-222ENST00000544093 EHFQ9NZC4 300 aa17.99■□□□□ 0.47
CHFR-222ENST00000544093 OVOL1O14753 267 aa17.98■□□□□ 0.47
CHFR-222ENST00000544093 MPPED1O15442 326 aa17.98■□□□□ 0.47
CHFR-222ENST00000544093 EIF4EP06730 217 aaKnown RBP17.98■□□□□ 0.47
CHFR-222ENST00000544093 MAS1LP35410 378 aa17.98■□□□□ 0.47
CHFR-222ENST00000544093 FXYD4P59646 89 aa17.98■□□□□ 0.47
CHFR-222ENST00000544093 DYRK1AQ13627 763 aa17.98■□□□□ 0.47
CHFR-222ENST00000544093 CTF1Q16619 201 aa17.98■□□□□ 0.47
CHFR-222ENST00000544093 DHRS11Q6UWP2 260 aa17.98■□□□□ 0.47
CHFR-222ENST00000544093 ZNF429Q86V71 674 aa17.98■□□□□ 0.47
CHFR-222ENST00000544093 OR5H2Q8NGV7 314 aa17.98■□□□□ 0.47
CHFR-222ENST00000544093 USMG5Q96IX5 58 aa17.98■□□□□ 0.47
CHFR-222ENST00000544093 TINAGL1Q9GZM7 467 aaPredicted RBP17.98■□□□□ 0.47
CHFR-222ENST00000544093 ALX4Q9H161 411 aaPredicted RBP17.98■□□□□ 0.47
CHFR-222ENST00000544093 RANGRFQ9HD47 186 aaPredicted RBP17.98■□□□□ 0.47
CHFR-222ENST00000544093 WI2-2373I1.2A0A1W2PRP0 233 aa17.97■□□□□ 0.47
CHFR-222ENST00000544093 KBTBD11O94819 623 aa17.97■□□□□ 0.47
CHFR-222ENST00000544093 IGHV3-11P01762 117 aa17.97■□□□□ 0.47
CHFR-222ENST00000544093 FCER2P06734 321 aa17.97■□□□□ 0.47
CHFR-222ENST00000544093 OR9G9P0C7N8 305 aa17.97■□□□□ 0.47
CHFR-222ENST00000544093 TMEM167AQ8TBQ9 72 aa17.97■□□□□ 0.47
CHFR-222ENST00000544093 CD300LFQ8TDQ1 290 aa17.97■□□□□ 0.47
CHFR-222ENST00000544093 DCUN1D4Q92564 292 aa17.97■□□□□ 0.47
CHFR-222ENST00000544093 COA4Q9NYJ1 87 aa17.97■□□□□ 0.47
CHFR-222ENST00000544093 IGHV4OR15-8A0A075B7B6 117 aa17.96■□□□□ 0.47
CHFR-222ENST00000544093 A0A087WW49 117 aa17.96■□□□□ 0.47
CHFR-222ENST00000544093 TNFSF12O43508 249 aa17.96■□□□□ 0.47
CHFR-222ENST00000544093 ZP3P21754 424 aa17.96■□□□□ 0.47
CHFR-222ENST00000544093 DEFB121Q5J5C9 76 aa17.96■□□□□ 0.47
CHFR-222ENST00000544093 GPR141Q7Z602 305 aa17.96■□□□□ 0.47
CHFR-222ENST00000544093 SLC25A42Q86VD7 318 aa17.96■□□□□ 0.47
CHFR-222ENST00000544093 TMEM17Q86X19 198 aa17.96■□□□□ 0.47
CHFR-222ENST00000544093 PUSL1Q8N0Z8 303 aaKnown RBP17.96■□□□□ 0.47
CHFR-222ENST00000544093 OR4A5Q8NH83 315 aa17.96■□□□□ 0.47
CHFR-222ENST00000544093 GPX8Q8TED1 209 aa17.96■□□□□ 0.47
CHFR-222ENST00000544093 SCOCQ9UIL1 159 aa17.96■□□□□ 0.47
CHFR-222ENST00000544093 ADAM30Q9UKF2 790 aa17.96■□□□□ 0.47
CHFR-222ENST00000544093 SULT1C2O00338 296 aa17.95■□□□□ 0.46
CHFR-222ENST00000544093 ZNF182P17025 639 aaPredicted RBP17.95■□□□□ 0.46
CHFR-222ENST00000544093 RFX2P48378 723 aa17.95■□□□□ 0.46
CHFR-222ENST00000544093 BRWD1-AS2P59051 145 aa17.95■□□□□ 0.46
CHFR-222ENST00000544093 GPR107Q5VW38 600 aa17.95■□□□□ 0.46
CHFR-222ENST00000544093 SPAG16Q8N0X2 631 aa17.95■□□□□ 0.46
CHFR-222ENST00000544093 ADAD2Q8NCV1 583 aaKnown RBP17.95■□□□□ 0.46
CHFR-222ENST00000544093 DLX4Q92988 240 aaPredicted RBP17.95■□□□□ 0.46
CHFR-222ENST00000544093 MOB3AQ96BX8 217 aa17.95■□□□□ 0.46
CHFR-222ENST00000544093 TPPPO94811 219 aa17.94■□□□□ 0.46
CHFR-222ENST00000544093 HPRT1P00492 218 aa17.94■□□□□ 0.46
CHFR-222ENST00000544093 PMP2P02689 132 aa17.94■□□□□ 0.46
CHFR-222ENST00000544093 ELK1P19419 428 aa17.94■□□□□ 0.46
CHFR-222ENST00000544093 SLURP1P55000 103 aa17.94■□□□□ 0.46
CHFR-222ENST00000544093 TAS2R31P59538 309 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms