RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 Q8N7P7 452 aa16.12■□□□□ 0.17
COPS7A-218ENST00000543939 OR5C1Q8NGR4 320 aa16.12■□□□□ 0.17
COPS7A-218ENST00000543939 OR4A16Q8NH70 328 aa16.12■□□□□ 0.17
COPS7A-218ENST00000543939 RBMXL1Q96E39 390 aaKnown RBP16.12■□□□□ 0.17
COPS7A-218ENST00000543939 CCL19Q99731 98 aa16.12■□□□□ 0.17
COPS7A-218ENST00000543939 GINS3Q9BRX5 216 aa16.12■□□□□ 0.17
COPS7A-218ENST00000543939 MED9Q9NWA0 146 aa16.12■□□□□ 0.17
COPS7A-218ENST00000543939 AKAP6Q13023 2319 aa16.12■□□□□ 0.17
COPS7A-218ENST00000543939 MYO18BQ8IUG5 2567 aa16.12■□□□□ 0.17
COPS7A-218ENST00000543939 TRAV3A0A0B4J244 114 aa16.11■□□□□ 0.17
COPS7A-218ENST00000543939 FGF16O43320 207 aa16.11■□□□□ 0.17
COPS7A-218ENST00000543939 IGHV2-5P01817 119 aa16.11■□□□□ 0.17
COPS7A-218ENST00000543939 TMEM267Q0VDI3 215 aaPredicted RBP16.11■□□□□ 0.17
COPS7A-218ENST00000543939 CLINT1Q14677 625 aa16.11■□□□□ 0.17
COPS7A-218ENST00000543939 HLA-DRB5Q30154 266 aa16.11■□□□□ 0.17
COPS7A-218ENST00000543939 TMEM217Q8N7C4 229 aa16.11■□□□□ 0.17
COPS7A-218ENST00000543939 BEND2Q8NDZ0 799 aa16.11■□□□□ 0.17
COPS7A-218ENST00000543939 OR52E5Q8NH55 327 aa16.11■□□□□ 0.17
COPS7A-218ENST00000543939 M0R1W7 72 aa16.11■□□□□ 0.17
COPS7A-218ENST00000543939 IL6RP08887 468 aaPredicted RBP16.11■□□□□ 0.17
COPS7A-218ENST00000543939 FAM157CP0CG43 387 aa16.11■□□□□ 0.17
COPS7A-218ENST00000543939 PDLIM3Q53GG5 364 aaPredicted RBP16.11■□□□□ 0.17
COPS7A-218ENST00000543939 COMMD7Q86VX2 200 aa16.11■□□□□ 0.17
COPS7A-218ENST00000543939 TGIF2LXQ8IUE1 241 aa16.11■□□□□ 0.17
COPS7A-218ENST00000543939 DTD1Q8TEA8 209 aa16.11■□□□□ 0.17
COPS7A-218ENST00000543939 ZDHHC16Q969W1 377 aa16.11■□□□□ 0.17
COPS7A-218ENST00000543939 PCGF1Q9BSM1 259 aa16.11■□□□□ 0.17
COPS7A-218ENST00000543939 SPCS3P61009 180 aa16.1■□□□□ 0.17
COPS7A-218ENST00000543939 ARF6P62330 175 aa16.1■□□□□ 0.17
COPS7A-218ENST00000543939 PRB3Q04118 309 aaPredicted RBP16.1■□□□□ 0.17
COPS7A-218ENST00000543939 ZNF266Q14584 549 aa16.1■□□□□ 0.17
COPS7A-218ENST00000543939 SPANXN5Q5MJ07 72 aa16.1■□□□□ 0.17
COPS7A-218ENST00000543939 TMEM14EPQ6UXP3 125 aa16.1■□□□□ 0.17
COPS7A-218ENST00000543939 ZNF429Q86V71 674 aa16.1■□□□□ 0.17
COPS7A-218ENST00000543939 OR1S2Q8NGQ3 325 aa16.1■□□□□ 0.17
COPS7A-218ENST00000543939 OSR1Q8TAX0 266 aaPredicted RBP16.1■□□□□ 0.17
COPS7A-218ENST00000543939 LRRC20Q8TCA0 184 aa16.1■□□□□ 0.17
COPS7A-218ENST00000543939 RNF141Q8WVD5 230 aa16.1■□□□□ 0.17
COPS7A-218ENST00000543939 CIB3Q96Q77 187 aaPredicted RBP16.1■□□□□ 0.17
COPS7A-218ENST00000543939 CITED4Q96RK1 184 aa16.1■□□□□ 0.17
COPS7A-218ENST00000543939 BPESC1Q9GZL8 116 aa16.1■□□□□ 0.17
COPS7A-218ENST00000543939 SRRM4A7MD48 611 aaKnown RBP16.09■□□□□ 0.17
COPS7A-218ENST00000543939 CEBPZOSA8MTT3 80 aa16.09■□□□□ 0.17
COPS7A-218ENST00000543939 FBXO24O75426 580 aa16.09■□□□□ 0.17
COPS7A-218ENST00000543939 METTL15P1P0C7V9 234 aa16.09■□□□□ 0.17
COPS7A-218ENST00000543939 PDLIM4P50479 330 aa16.09■□□□□ 0.17
COPS7A-218ENST00000543939 TMEM177Q53S58 311 aa16.09■□□□□ 0.17
COPS7A-218ENST00000543939 HAPLN4Q86UW8 402 aa16.09■□□□□ 0.17
COPS7A-218ENST00000543939 PDPNQ86YL7 162 aa16.09■□□□□ 0.17
COPS7A-218ENST00000543939 STPG2Q8N412 459 aa16.09■□□□□ 0.17
COPS7A-218ENST00000543939 BARX1Q9HBU1 254 aaPredicted RBP16.09■□□□□ 0.17
COPS7A-218ENST00000543939 PLA2G2EQ9NZK7 142 aa16.09■□□□□ 0.17
COPS7A-218ENST00000543939 CACFD1Q9UGQ2 172 aa16.09■□□□□ 0.17
COPS7A-218ENST00000543939 UBR5O95071 2799 aaPredicted RBP16.09■□□□□ 0.17
COPS7A-218ENST00000543939 C15orf61A6NNL5 157 aa16.08■□□□□ 0.17
COPS7A-218ENST00000543939 BUB1B-PAK6H3BSN5 160 aa16.08■□□□□ 0.17
COPS7A-218ENST00000543939 H7C2Y5 167 aa16.08■□□□□ 0.17
COPS7A-218ENST00000543939 IFNA17P01571 189 aa16.08■□□□□ 0.17
COPS7A-218ENST00000543939 COX7A1P24310 79 aa16.08■□□□□ 0.17
COPS7A-218ENST00000543939 ZFP36P26651 326 aaKnown RBP16.08■□□□□ 0.17
COPS7A-218ENST00000543939 ARL16Q0P5N6 197 aa16.08■□□□□ 0.17
COPS7A-218ENST00000543939 SPINK9Q5DT21 86 aa16.08■□□□□ 0.17
COPS7A-218ENST00000543939 OR4C12Q96R67 309 aa16.08■□□□□ 0.17
COPS7A-218ENST00000543939 ATP5SQ99766 215 aa16.08■□□□□ 0.17
COPS7A-218ENST00000543939 AIFM2Q9BRQ8 373 aa16.08■□□□□ 0.17
COPS7A-218ENST00000543939 FOXA2Q9Y261 457 aaPredicted RBP16.08■□□□□ 0.17
COPS7A-218ENST00000543939 SHOXO15266 292 aa16.08■□□□□ 0.16
COPS7A-218ENST00000543939 SEC11BP0C7V7 166 aa16.08■□□□□ 0.16
COPS7A-218ENST00000543939 SPP1P10451 314 aa16.08■□□□□ 0.16
COPS7A-218ENST00000543939 LMO4P61968 165 aa16.08■□□□□ 0.16
COPS7A-218ENST00000543939 PNKDQ8N490 385 aa16.08■□□□□ 0.16
COPS7A-218ENST00000543939 KIR3DL3Q8N743 410 aa16.08■□□□□ 0.16
COPS7A-218ENST00000543939 OR4P4Q8NGL7 312 aa16.08■□□□□ 0.16
COPS7A-218ENST00000543939 CLDND2Q8NHS1 167 aa16.08■□□□□ 0.16
COPS7A-218ENST00000543939 LHX4Q969G2 390 aa16.08■□□□□ 0.16
COPS7A-218ENST00000543939 TMEM14BQ9NUH8 114 aa16.08■□□□□ 0.16
COPS7A-218ENST00000543939 WASHC3Q9Y3C0 194 aa16.08■□□□□ 0.16
COPS7A-218ENST00000543939 COL12A1Q99715 3063 aa16.07■□□□□ 0.16
COPS7A-218ENST00000543939 UPK2O00526 184 aa16.07■□□□□ 0.16
COPS7A-218ENST00000543939 DFFBO76075 338 aa16.07■□□□□ 0.16
COPS7A-218ENST00000543939 LY86O95711 162 aa16.07■□□□□ 0.16
COPS7A-218ENST00000543939 SULT1A2P50226 295 aa16.07■□□□□ 0.16
COPS7A-218ENST00000543939 SP5Q6BEB4 398 aaPredicted RBP16.07■□□□□ 0.16
COPS7A-218ENST00000543939 C1orf122Q6ZSJ8 110 aa16.07■□□□□ 0.16
COPS7A-218ENST00000543939 MARVELD3Q96A59 401 aa16.07■□□□□ 0.16
COPS7A-218ENST00000543939 FLYWCH2Q96CP2 140 aaKnown RBP16.07■□□□□ 0.16
COPS7A-218ENST00000543939 BET1LQ9NYM9 111 aa16.07■□□□□ 0.16
COPS7A-218ENST00000543939 AMMECR1Q9Y4X0 333 aaPredicted RBP16.07■□□□□ 0.16
COPS7A-218ENST00000543939 A8MXK9 166 aa16.06■□□□□ 0.16
COPS7A-218ENST00000543939 COX6B1P14854 86 aa16.06■□□□□ 0.16
COPS7A-218ENST00000543939 PRTN3P24158 256 aa16.06■□□□□ 0.16
COPS7A-218ENST00000543939 MC5RP33032 325 aa16.06■□□□□ 0.16
COPS7A-218ENST00000543939 PAX2Q02962 417 aa16.06■□□□□ 0.16
COPS7A-218ENST00000543939 PUSL1Q8N0Z8 303 aaKnown RBP16.06■□□□□ 0.16
COPS7A-218ENST00000543939 HSD17B11Q8NBQ5 300 aa16.06■□□□□ 0.16
COPS7A-218ENST00000543939 OR11H6Q8NGC7 330 aa16.06■□□□□ 0.16
COPS7A-218ENST00000543939 OR4C13Q8NGP0 309 aa16.06■□□□□ 0.16
COPS7A-218ENST00000543939 HARBI1Q96MB7 349 aa16.06■□□□□ 0.16
COPS7A-218ENST00000543939 REG4Q9BYZ8 158 aa16.06■□□□□ 0.16
COPS7A-218ENST00000543939 SIRT7Q9NRC8 400 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms