RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 IGKV1-16P04430 117 aa9.54□□□□□ -0.88
DDB1-223ENST00000543658 SUPT4H1P63272 117 aaKnown RBP9.54□□□□□ -0.88
DDB1-223ENST00000543658 SSX9Q7RTT3 188 aa9.54□□□□□ -0.88
DDB1-223ENST00000543658 C16orf82Q7Z2V1 217 aa9.54□□□□□ -0.88
DDB1-223ENST00000543658 LURAP1LQ8IV03 231 aa9.54□□□□□ -0.88
DDB1-223ENST00000543658 UXS1Q8NBZ7 420 aa9.54□□□□□ -0.88
DDB1-223ENST00000543658 OR8H1Q8NGG4 311 aa9.54□□□□□ -0.88
DDB1-223ENST00000543658 IL22RA2Q969J5 263 aa9.54□□□□□ -0.88
DDB1-223ENST00000543658 RRNAD1Q96FB5 475 aaKnown RBP9.54□□□□□ -0.88
DDB1-223ENST00000543658 ZNF48Q96MX3 618 aaPredicted RBP9.54□□□□□ -0.88
DDB1-223ENST00000543658 SLC25A33Q9BSK2 321 aa9.54□□□□□ -0.88
DDB1-223ENST00000543658 MOB4Q9Y3A3 225 aa9.54□□□□□ -0.88
DDB1-223ENST00000543658 HIVEP1P15822 2718 aa9.53□□□□□ -0.88
DDB1-223ENST00000543658 DUXBA0A1W2PPF3 345 aa9.53□□□□□ -0.88
DDB1-223ENST00000543658 MARCH11A6NNE9 402 aa9.53□□□□□ -0.88
DDB1-223ENST00000543658 SNRPGP15A8MWD9 76 aa9.53□□□□□ -0.88
DDB1-223ENST00000543658 OR2F2O95006 317 aa9.53□□□□□ -0.88
DDB1-223ENST00000543658 IFNA21P01568 189 aa9.53□□□□□ -0.88
DDB1-223ENST00000543658 G6PCP35575 357 aa9.53□□□□□ -0.88
DDB1-223ENST00000543658 EBI3Q14213 229 aa9.53□□□□□ -0.88
DDB1-223ENST00000543658 ZNF585BQ52M93 769 aa9.53□□□□□ -0.88
DDB1-223ENST00000543658 LIN54Q6MZP7 749 aa9.53□□□□□ -0.88
DDB1-223ENST00000543658 H2BFWTQ7Z2G1 175 aa9.53□□□□□ -0.88
DDB1-223ENST00000543658 C12orf45Q8N5I9 185 aaPredicted RBP9.53□□□□□ -0.88
DDB1-223ENST00000543658 TMEM86BQ8N661 226 aa9.53□□□□□ -0.88
DDB1-223ENST00000543658 GLYATL2Q8WU03 294 aa9.53□□□□□ -0.88
DDB1-223ENST00000543658 RBM14Q96PK6 669 aaKnown RBP9.53□□□□□ -0.88
DDB1-223ENST00000543658 RASL11BQ9BPW5 248 aa9.53□□□□□ -0.88
DDB1-223ENST00000543658 PRDM13Q9H4Q3 707 aa9.53□□□□□ -0.88
DDB1-223ENST00000543658 PRR13Q9NZ81 148 aa9.53□□□□□ -0.88
DDB1-223ENST00000543658 VPREB3Q9UKI3 123 aa9.53□□□□□ -0.88
DDB1-223ENST00000543658 A0A0B4J2A0 478 aa9.52□□□□□ -0.89
DDB1-223ENST00000543658 M0QZK8 103 aa9.52□□□□□ -0.89
DDB1-223ENST00000543658 SLC25A17O43808 307 aa9.52□□□□□ -0.89
DDB1-223ENST00000543658 RBMXL2O75526 392 aaKnown RBP9.52□□□□□ -0.89
DDB1-223ENST00000543658 SNAPC5O75971 98 aa9.52□□□□□ -0.89
DDB1-223ENST00000543658 CDS2O95674 445 aa9.52□□□□□ -0.89
DDB1-223ENST00000543658 KRASP01116 189 aa9.52□□□□□ -0.89
DDB1-223ENST00000543658 SAA1P0DJI8 122 aaPredicted RBP9.52□□□□□ -0.89
DDB1-223ENST00000543658 ANKRD55Q3KP44 614 aa9.52□□□□□ -0.89
DDB1-223ENST00000543658 THOC7Q6I9Y2 204 aaKnown RBP9.52□□□□□ -0.89
DDB1-223ENST00000543658 TMEM219Q86XT9 240 aa9.52□□□□□ -0.89
DDB1-223ENST00000543658 FAM219AQ8IW50 185 aa9.52□□□□□ -0.89
DDB1-223ENST00000543658 SELENOHQ8IZQ5 122 aaKnown RBP9.52□□□□□ -0.89
DDB1-223ENST00000543658 SLC35G3Q8N808 338 aa9.52□□□□□ -0.89
DDB1-223ENST00000543658 MITD1Q8WV92 249 aa9.52□□□□□ -0.89
DDB1-223ENST00000543658 RHOVQ96L33 236 aa9.52□□□□□ -0.89
DDB1-223ENST00000543658 TMEM56Q96MV1 263 aa9.52□□□□□ -0.89
DDB1-223ENST00000543658 OR51J1Q9H342 316 aa9.52□□□□□ -0.89
DDB1-223ENST00000543658 METTL1Q9UBP6 276 aaKnown RBP9.52□□□□□ -0.89
DDB1-223ENST00000543658 SHPKQ9UHJ6 478 aa9.52□□□□□ -0.89
DDB1-223ENST00000543658 ALG5Q9Y673 324 aa9.52□□□□□ -0.89
DDB1-223ENST00000543658 TMEM56-RWDD3S4R434 201 aa9.52□□□□□ -0.89
DDB1-223ENST00000543658 A6NDX4 124 aa9.51□□□□□ -0.89
DDB1-223ENST00000543658 DNAJC9-AS1A6NH13 148 aa9.51□□□□□ -0.89
DDB1-223ENST00000543658 RRHO14718 337 aa9.51□□□□□ -0.89
DDB1-223ENST00000543658 FGF16O43320 207 aa9.51□□□□□ -0.89
DDB1-223ENST00000543658 TCF21O43680 179 aa9.51□□□□□ -0.89
DDB1-223ENST00000543658 ACTL6BO94805 426 aa9.51□□□□□ -0.89
DDB1-223ENST00000543658 OR2A4O95047 310 aa9.51□□□□□ -0.89
DDB1-223ENST00000543658 HOXB5P09067 269 aa9.51□□□□□ -0.89
DDB1-223ENST00000543658 VDAC1P21796 283 aa9.51□□□□□ -0.89
DDB1-223ENST00000543658 CNTFRP26992 372 aa9.51□□□□□ -0.89
DDB1-223ENST00000543658 BRWD1-AS2P59051 145 aa9.51□□□□□ -0.89
DDB1-223ENST00000543658 UBE2KP61086 200 aa9.51□□□□□ -0.89
DDB1-223ENST00000543658 PSG5Q15238 335 aa9.51□□□□□ -0.89
DDB1-223ENST00000543658 ARSJQ5FYB0 599 aaPredicted RBP9.51□□□□□ -0.89
DDB1-223ENST00000543658 VKORC1L1Q8N0U8 176 aa9.51□□□□□ -0.89
DDB1-223ENST00000543658 LRTM2Q8N967 370 aa9.51□□□□□ -0.89
DDB1-223ENST00000543658 TEX45Q8NA69 505 aa9.51□□□□□ -0.89
DDB1-223ENST00000543658 OR4A5Q8NH83 315 aa9.51□□□□□ -0.89
DDB1-223ENST00000543658 OR2A7Q96R45 310 aa9.51□□□□□ -0.89
DDB1-223ENST00000543658 SPIN2AQ99865 258 aa9.51□□□□□ -0.89
DDB1-223ENST00000543658 SPIN2BQ9BPZ2 258 aa9.51□□□□□ -0.89
DDB1-223ENST00000543658 PDCD10Q9BUL8 212 aa9.51□□□□□ -0.89
DDB1-223ENST00000543658 FBXL15Q9H469 300 aa9.51□□□□□ -0.89
DDB1-223ENST00000543658 TMEM140Q9NV12 185 aa9.51□□□□□ -0.89
DDB1-223ENST00000543658 A0A0A6YYJ9 748 aa9.5□□□□□ -0.89
DDB1-223ENST00000543658 C7orf66A4D0T2 115 aa9.5□□□□□ -0.89
DDB1-223ENST00000543658 FAM25EA8MYX2 175 aa9.5□□□□□ -0.89
DDB1-223ENST00000543658 KBTBD11O94819 623 aa9.5□□□□□ -0.89
DDB1-223ENST00000543658 NDUFA3O95167 84 aa9.5□□□□□ -0.89
DDB1-223ENST00000543658 CRYBA1P05813 215 aa9.5□□□□□ -0.89
DDB1-223ENST00000543658 F2RL1P55085 397 aa9.5□□□□□ -0.89
DDB1-223ENST00000543658 HILS1P60008 231 aa9.5□□□□□ -0.89
DDB1-223ENST00000543658 OR4A47Q6IF82 309 aa9.5□□□□□ -0.89
DDB1-223ENST00000543658 Q8N6K4 173 aa9.5□□□□□ -0.89
DDB1-223ENST00000543658 NPBQ8NG41 125 aa9.5□□□□□ -0.89
DDB1-223ENST00000543658 OR4A16Q8NH70 328 aa9.5□□□□□ -0.89
DDB1-223ENST00000543658 LHFPL5Q8TAF8 219 aa9.5□□□□□ -0.89
DDB1-223ENST00000543658 PIFOQ8TCI5 191 aa9.5□□□□□ -0.89
DDB1-223ENST00000543658 LSM10Q969L4 123 aaKnown RBP9.5□□□□□ -0.89
DDB1-223ENST00000543658 RBMXL1Q96E39 390 aaKnown RBP9.5□□□□□ -0.89
DDB1-223ENST00000543658 SEC22AQ96IW7 307 aa9.5□□□□□ -0.89
DDB1-223ENST00000543658 DUX5Q96PT3 197 aa9.5□□□□□ -0.89
DDB1-223ENST00000543658 CLCC1Q96S66 551 aa9.5□□□□□ -0.89
DDB1-223ENST00000543658 MED28Q9H204 178 aa9.5□□□□□ -0.89
DDB1-223ENST00000543658 RANBP3Q9H6Z4 567 aaPredicted RBP9.5□□□□□ -0.89
DDB1-223ENST00000543658 BET1LQ9NYM9 111 aa9.5□□□□□ -0.89
DDB1-223ENST00000543658 TMED3Q9Y3Q3 217 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms