RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 GNB2P62879 340 aa11.49□□□□□ -0.57
MSH2-206ENST00000543555 HNF4GQ14541 408 aa11.49□□□□□ -0.57
MSH2-206ENST00000543555 ACSM6Q6P461 480 aa11.49□□□□□ -0.57
MSH2-206ENST00000543555 SSX9Q7RTT3 188 aa11.49□□□□□ -0.57
MSH2-206ENST00000543555 RPP25LQ8N5L8 163 aaKnown RBP11.49□□□□□ -0.57
MSH2-206ENST00000543555 LEAP2Q969E1 77 aa11.49□□□□□ -0.57
MSH2-206ENST00000543555 S1PR3Q99500 378 aa11.49□□□□□ -0.57
MSH2-206ENST00000543555 NIPSNAP3BQ9BS92 247 aa11.49□□□□□ -0.57
MSH2-206ENST00000543555 TRGV10A0A0A0MS01 117 aa11.49□□□□□ -0.57
MSH2-206ENST00000543555 IFNA17P01571 189 aa11.49□□□□□ -0.57
MSH2-206ENST00000543555 WFDC8Q8IUA0 241 aa11.49□□□□□ -0.57
MSH2-206ENST00000543555 FAM24BQ8N5W8 94 aa11.49□□□□□ -0.57
MSH2-206ENST00000543555 DDB2Q92466 427 aa11.49□□□□□ -0.57
MSH2-206ENST00000543555 C15orf62A8K5M9 175 aa11.48□□□□□ -0.57
MSH2-206ENST00000543555 KIR2DS2P43631 304 aa11.48□□□□□ -0.57
MSH2-206ENST00000543555 ERVK-16P61578 105 aa11.48□□□□□ -0.57
MSH2-206ENST00000543555 CT45A1Q5HYN5 189 aa11.48□□□□□ -0.57
MSH2-206ENST00000543555 GFRALQ6UXV0 394 aa11.48□□□□□ -0.57
MSH2-206ENST00000543555 ZNF788Q6ZQV5 615 aa11.48□□□□□ -0.57
MSH2-206ENST00000543555 C1orf229Q6ZS94 237 aaPredicted RBP11.48□□□□□ -0.57
MSH2-206ENST00000543555 TCF23Q7RTU1 214 aa11.48□□□□□ -0.57
MSH2-206ENST00000543555 OR4A16Q8NH70 328 aa11.48□□□□□ -0.57
MSH2-206ENST00000543555 CT45A3Q8NHU0 189 aa11.48□□□□□ -0.57
MSH2-206ENST00000543555 TVP23CQ96ET8 276 aa11.48□□□□□ -0.57
MSH2-206ENST00000543555 CCL13Q99616 98 aa11.48□□□□□ -0.57
MSH2-206ENST00000543555 SLC39A9Q9NUM3 307 aa11.48□□□□□ -0.57
MSH2-206ENST00000543555 POLEQ07864 2286 aa11.48□□□□□ -0.57
MSH2-206ENST00000543555 C1orf196B1AJZ1 125 aa11.48□□□□□ -0.57
MSH2-206ENST00000543555 GYPAP02724 150 aa11.48□□□□□ -0.57
MSH2-206ENST00000543555 IRF2P14316 349 aa11.48□□□□□ -0.57
MSH2-206ENST00000543555 UCNP55089 124 aa11.48□□□□□ -0.57
MSH2-206ENST00000543555 TFF3Q07654 80 aa11.48□□□□□ -0.57
MSH2-206ENST00000543555 TGIF2LYQ8IUE0 185 aa11.48□□□□□ -0.57
MSH2-206ENST00000543555 VKORC1L1Q8N0U8 176 aa11.48□□□□□ -0.57
MSH2-206ENST00000543555 A0A1W2PPE3 182 aa11.47□□□□□ -0.57
MSH2-206ENST00000543555 DPRXA6NFQ7 191 aa11.47□□□□□ -0.57
MSH2-206ENST00000543555 OR2C1O95371 312 aa11.47□□□□□ -0.57
MSH2-206ENST00000543555 LY86O95711 162 aa11.47□□□□□ -0.57
MSH2-206ENST00000543555 NQO2P16083 231 aa11.47□□□□□ -0.57
MSH2-206ENST00000543555 RAB5AP20339 215 aa11.47□□□□□ -0.57
MSH2-206ENST00000543555 TAGLN2P37802 199 aaKnown RBP11.47□□□□□ -0.57
MSH2-206ENST00000543555 SPCS3P61009 180 aa11.47□□□□□ -0.57
MSH2-206ENST00000543555 RAB11AP62491 216 aa11.47□□□□□ -0.57
MSH2-206ENST00000543555 DLK1P80370 383 aa11.47□□□□□ -0.57
MSH2-206ENST00000543555 FAM90A2PQ658T7 463 aa11.47□□□□□ -0.57
MSH2-206ENST00000543555 FAM216BQ8N7L0 139 aa11.47□□□□□ -0.57
MSH2-206ENST00000543555 SPTBN1Q01082 2364 aaKnown RBP11.47□□□□□ -0.57
MSH2-206ENST00000543555 EIF3GO75821 320 aaKnown RBP eCLIP11.47□□□□□ -0.57
MSH2-206ENST00000543555 TEX36Q5VZQ5 186 aa11.47□□□□□ -0.57
MSH2-206ENST00000543555 SLC35E3Q7Z769 313 aa11.47□□□□□ -0.57
MSH2-206ENST00000543555 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.47□□□□□ -0.57
MSH2-206ENST00000543555 OR52E5Q8NH55 327 aa11.47□□□□□ -0.57
MSH2-206ENST00000543555 CA5BP1Q8WTZ4 195 aa11.47□□□□□ -0.57
MSH2-206ENST00000543555 LHX4Q969G2 390 aa11.47□□□□□ -0.57
MSH2-206ENST00000543555 NPCDR1Q9BY65 106 aa11.47□□□□□ -0.57
MSH2-206ENST00000543555 DCAF16Q9NXF7 216 aa11.47□□□□□ -0.57
MSH2-206ENST00000543555 VAX2Q9UIW0 290 aa11.47□□□□□ -0.57
MSH2-206ENST00000543555 A0A087WWC5 75 aa11.46□□□□□ -0.57
MSH2-206ENST00000543555 SAA2-SAA4A0A096LPE2 208 aa11.46□□□□□ -0.57
MSH2-206ENST00000543555 hCG_1809904A0A1W2PP81 198 aa11.46□□□□□ -0.57
MSH2-206ENST00000543555 A0A1W2PR64 198 aa11.46□□□□□ -0.57
MSH2-206ENST00000543555 A0A1W2PRV1 198 aa11.46□□□□□ -0.57
MSH2-206ENST00000543555 DSCAMO60469 2012 aa11.46□□□□□ -0.57
MSH2-206ENST00000543555 IFNA1P01562 189 aa11.46□□□□□ -0.57
MSH2-206ENST00000543555 MBP02144 154 aa11.46□□□□□ -0.57
MSH2-206ENST00000543555 THBDP07204 575 aa11.46□□□□□ -0.57
MSH2-206ENST00000543555 SAA2P0DJI9 122 aaPredicted RBP11.46□□□□□ -0.57
MSH2-206ENST00000543555 MDKP21741 143 aaPredicted RBP11.46□□□□□ -0.57
MSH2-206ENST00000543555 MAS1LP35410 378 aa11.46□□□□□ -0.57
MSH2-206ENST00000543555 PMS2P11Q13670 270 aa11.46□□□□□ -0.57
MSH2-206ENST00000543555 ADIPOQQ15848 244 aa11.46□□□□□ -0.57
MSH2-206ENST00000543555 OR4S2Q8NH73 311 aa11.46□□□□□ -0.57
MSH2-206ENST00000543555 YPEL4Q96NS1 127 aa11.46□□□□□ -0.57
MSH2-206ENST00000543555 P2RX4Q99571 388 aa11.46□□□□□ -0.57
MSH2-206ENST00000543555 TMEM140Q9NV12 185 aa11.46□□□□□ -0.57
MSH2-206ENST00000543555 JKAMPQ9P055 326 aa11.46□□□□□ -0.57
MSH2-206ENST00000543555 ATXN7O15265 892 aaPredicted RBP11.46□□□□□ -0.57
MSH2-206ENST00000543555 CCL8P80075 99 aa11.46□□□□□ -0.57
MSH2-206ENST00000543555 RELBQ01201 579 aa11.46□□□□□ -0.57
MSH2-206ENST00000543555 PDLIM3Q53GG5 364 aaPredicted RBP11.46□□□□□ -0.57
MSH2-206ENST00000543555 FFAR4Q5NUL3 377 aa11.46□□□□□ -0.57
MSH2-206ENST00000543555 ZNF439Q8NDP4 499 aa11.46□□□□□ -0.57
MSH2-206ENST00000543555 ZNF251Q9BRH9 671 aa11.46□□□□□ -0.57
MSH2-206ENST00000543555 IDI2-AS1Q9NZ38 188 aa11.46□□□□□ -0.57
MSH2-206ENST00000543555 ZNF835Q9Y2P0 537 aa11.46□□□□□ -0.57
MSH2-206ENST00000543555 ROS1P08922 2347 aa11.46□□□□□ -0.57
MSH2-206ENST00000543555 ZNF729A6NN14 1252 aaPredicted RBP11.46□□□□□ -0.58
MSH2-206ENST00000543555 OR4A8P0C604 315 aa11.46□□□□□ -0.58
MSH2-206ENST00000543555 TNFRSF1AP19438 455 aa11.46□□□□□ -0.58
MSH2-206ENST00000543555 AGAP20933 346 aa11.46□□□□□ -0.58
MSH2-206ENST00000543555 HOXA1P49639 335 aaPredicted RBP11.46□□□□□ -0.58
MSH2-206ENST00000543555 BSPH1Q075Z2 132 aa11.46□□□□□ -0.58
MSH2-206ENST00000543555 ZNF709Q8N972 641 aa11.46□□□□□ -0.58
MSH2-206ENST00000543555 OR10G9Q8NGN4 311 aa11.46□□□□□ -0.58
MSH2-206ENST00000543555 OR10G7Q8NGN6 311 aa11.46□□□□□ -0.58
MSH2-206ENST00000543555 DIRC2Q96SL1 478 aa11.46□□□□□ -0.58
MSH2-206ENST00000543555 LINC00574Q9H8X3 128 aa11.46□□□□□ -0.58
MSH2-206ENST00000543555 SLC25A22Q9H936 323 aa11.46□□□□□ -0.58
MSH2-206ENST00000543555 TRAV3A0A0B4J244 114 aa11.45□□□□□ -0.58
MSH2-206ENST00000543555 CTXND1A0A1B0GTU2 59 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms