RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 A0A0G2JRQ6 117 aa8.58□□□□□ -1.04
DDB1-221ENST00000543162 MPTX1A8MV57 137 aa8.58□□□□□ -1.04
DDB1-221ENST00000543162 IGKV1D-33P01593 117 aa8.58□□□□□ -1.04
DDB1-221ENST00000543162 IGKV1-33P01594 117 aa8.58□□□□□ -1.04
DDB1-221ENST00000543162 SNRNP70P08621 437 aaKnown RBP8.58□□□□□ -1.04
DDB1-221ENST00000543162 FBP1P09467 338 aa8.58□□□□□ -1.04
DDB1-221ENST00000543162 GIPP09681 153 aaPredicted RBP8.58□□□□□ -1.04
DDB1-221ENST00000543162 LGALS7P47929 136 aa8.58□□□□□ -1.04
DDB1-221ENST00000543162 CYCSP99999 105 aaKnown RBP8.58□□□□□ -1.04
DDB1-221ENST00000543162 HES1Q14469 280 aa8.58□□□□□ -1.04
DDB1-221ENST00000543162 IAH1Q2TAA2 248 aaPredicted RBP8.58□□□□□ -1.04
DDB1-221ENST00000543162 NMSQ5H8A3 153 aa8.58□□□□□ -1.04
DDB1-221ENST00000543162 SSX9Q7RTT3 188 aa8.58□□□□□ -1.04
DDB1-221ENST00000543162 VKORC1L1Q8N0U8 176 aa8.58□□□□□ -1.04
DDB1-221ENST00000543162 OR2T10Q8NGZ9 312 aa8.58□□□□□ -1.04
DDB1-221ENST00000543162 GPR146Q96CH1 333 aa8.58□□□□□ -1.04
DDB1-221ENST00000543162 OR10C1Q96KK4 312 aa8.58□□□□□ -1.04
DDB1-221ENST00000543162 C2orf50Q96LR7 162 aa8.58□□□□□ -1.04
DDB1-221ENST00000543162 TSNAXQ99598 290 aaKnown RBP8.58□□□□□ -1.04
DDB1-221ENST00000543162 MEGF9Q9H1U4 602 aa8.58□□□□□ -1.04
DDB1-221ENST00000543162 GSKIPQ9P0R6 139 aa8.58□□□□□ -1.04
DDB1-221ENST00000543162 SOX21Q9Y651 276 aaPredicted RBP8.58□□□□□ -1.04
DDB1-221ENST00000543162 A0A1B0GU03 582 aa8.57□□□□□ -1.04
DDB1-221ENST00000543162 SRRM4A7MD48 611 aaKnown RBP8.57□□□□□ -1.04
DDB1-221ENST00000543162 OR2A4O95047 310 aa8.57□□□□□ -1.04
DDB1-221ENST00000543162 MOSP00540 346 aa8.57□□□□□ -1.04
DDB1-221ENST00000543162 P0C879 139 aa8.57□□□□□ -1.04
DDB1-221ENST00000543162 FAM106CPP0CH98 169 aa8.57□□□□□ -1.04
DDB1-221ENST00000543162 SLC25A6P12236 298 aa8.57□□□□□ -1.04
DDB1-221ENST00000543162 CD99P14209 185 aa8.57□□□□□ -1.04
DDB1-221ENST00000543162 HNF1AP20823 631 aa8.57□□□□□ -1.04
DDB1-221ENST00000543162 CD24P25063 80 aa8.57□□□□□ -1.04
DDB1-221ENST00000543162 SRP14P37108 136 aaKnown RBP8.57□□□□□ -1.04
DDB1-221ENST00000543162 RAP2BP61225 183 aa8.57□□□□□ -1.04
DDB1-221ENST00000543162 HNF4GQ14541 408 aa8.57□□□□□ -1.04
DDB1-221ENST00000543162 SMCO1Q147U7 214 aa8.57□□□□□ -1.04
DDB1-221ENST00000543162 POU2AF1Q16633 256 aa8.57□□□□□ -1.04
DDB1-221ENST00000543162 IZUMO4Q1ZYL8 232 aa8.57□□□□□ -1.04
DDB1-221ENST00000543162 VMA21Q3ZAQ7 101 aa8.57□□□□□ -1.04
DDB1-221ENST00000543162 FAM120AOSQ5T036 256 aa8.57□□□□□ -1.04
DDB1-221ENST00000543162 ZBTB8BQ8NAP8 495 aaPredicted RBP8.57□□□□□ -1.04
DDB1-221ENST00000543162 ASB13Q8WXK3 278 aa8.57□□□□□ -1.04
DDB1-221ENST00000543162 EAF1Q96JC9 268 aaPredicted RBP8.57□□□□□ -1.04
DDB1-221ENST00000543162 ST6GAL2Q96JF0 529 aa8.57□□□□□ -1.04
DDB1-221ENST00000543162 OR2A7Q96R45 310 aa8.57□□□□□ -1.04
DDB1-221ENST00000543162 RNF5Q99942 180 aa8.57□□□□□ -1.04
DDB1-221ENST00000543162 NEURL2Q9BR09 285 aa8.57□□□□□ -1.04
DDB1-221ENST00000543162 RANBP3Q9H6Z4 567 aaPredicted RBP8.57□□□□□ -1.04
DDB1-221ENST00000543162 RANGRFQ9HD47 186 aaPredicted RBP8.57□□□□□ -1.04
DDB1-221ENST00000543162 TMEM140Q9NV12 185 aa8.57□□□□□ -1.04
DDB1-221ENST00000543162 CACNG5Q9UF02 275 aa8.57□□□□□ -1.04
DDB1-221ENST00000543162 FAM90A9PA6NNJ1 464 aa8.56□□□□□ -1.04
DDB1-221ENST00000543162 SNAPC5O75971 98 aa8.56□□□□□ -1.04
DDB1-221ENST00000543162 SAA1P0DJI8 122 aaPredicted RBP8.56□□□□□ -1.04
DDB1-221ENST00000543162 FOSL1P15407 271 aa8.56□□□□□ -1.04
DDB1-221ENST00000543162 TMEM11P17152 192 aa8.56□□□□□ -1.04
DDB1-221ENST00000543162 DYNLT3P51808 116 aa8.56□□□□□ -1.04
DDB1-221ENST00000543162 UBE2KP61086 200 aa8.56□□□□□ -1.04
DDB1-221ENST00000543162 SRSF4Q08170 494 aaKnown RBP8.56□□□□□ -1.04
DDB1-221ENST00000543162 EBI3Q14213 229 aa8.56□□□□□ -1.04
DDB1-221ENST00000543162 LRRC75BQ2VPJ9 315 aa8.56□□□□□ -1.04
DDB1-221ENST00000543162 OR4A47Q6IF82 309 aa8.56□□□□□ -1.04
DDB1-221ENST00000543162 Q6ZRM9 215 aa8.56□□□□□ -1.04
DDB1-221ENST00000543162 C9orf139Q6ZV77 190 aa8.56□□□□□ -1.04
DDB1-221ENST00000543162 IL17RELQ6ZVW7 336 aa8.56□□□□□ -1.04
DDB1-221ENST00000543162 THNSL2Q86YJ6 484 aa8.56□□□□□ -1.04
DDB1-221ENST00000543162 BCL6BQ8N143 479 aaPredicted RBP8.56□□□□□ -1.04
DDB1-221ENST00000543162 OR1S1Q8NH92 325 aa8.56□□□□□ -1.04
DDB1-221ENST00000543162 VSTM2AQ8TAG5 236 aa8.56□□□□□ -1.04
DDB1-221ENST00000543162 C22orf15Q8WYQ4 148 aa8.56□□□□□ -1.04
DDB1-221ENST00000543162 WDR89Q96FK6 387 aaPredicted RBP8.56□□□□□ -1.04
DDB1-221ENST00000543162 RITA1Q96K30 269 aa8.56□□□□□ -1.04
DDB1-221ENST00000543162 SSX3Q99909 188 aa8.56□□□□□ -1.04
DDB1-221ENST00000543162 SMR3AQ99954 134 aa8.56□□□□□ -1.04
DDB1-221ENST00000543162 TMUB1Q9BVT8 246 aa8.56□□□□□ -1.04
DDB1-221ENST00000543162 NMES1Q9C002 83 aa8.56□□□□□ -1.04
DDB1-221ENST00000543162 VPS13CQ709C8 3753 aa8.56□□□□□ -1.04
DDB1-221ENST00000543162 OTOGQ6ZRI0 2925 aa8.55□□□□□ -1.04
DDB1-221ENST00000543162 SLC25A17O43808 307 aa8.55□□□□□ -1.04
DDB1-221ENST00000543162 RBMXL2O75526 392 aaKnown RBP8.55□□□□□ -1.04
DDB1-221ENST00000543162 SPDEFO95238 335 aa8.55□□□□□ -1.04
DDB1-221ENST00000543162 LY6G6DO95868 133 aa8.55□□□□□ -1.04
DDB1-221ENST00000543162 IGLV2-23P01705 113 aa8.55□□□□□ -1.04
DDB1-221ENST00000543162 OR9G9P0C7N8 305 aa8.55□□□□□ -1.04
DDB1-221ENST00000543162 CNTFRP26992 372 aa8.55□□□□□ -1.04
DDB1-221ENST00000543162 PSG5Q15238 335 aa8.55□□□□□ -1.04
DDB1-221ENST00000543162 MMDQ15546 238 aa8.55□□□□□ -1.04
DDB1-221ENST00000543162 AANATQ16613 207 aa8.55□□□□□ -1.04
DDB1-221ENST00000543162 DEFB112Q30KQ8 113 aa8.55□□□□□ -1.04
DDB1-221ENST00000543162 TCTE3Q8IZS6 198 aa8.55□□□□□ -1.04
DDB1-221ENST00000543162 PUSL1Q8N0Z8 303 aaKnown RBP8.55□□□□□ -1.04
DDB1-221ENST00000543162 TEX45Q8NA69 505 aa8.55□□□□□ -1.04
DDB1-221ENST00000543162 OR2T35Q8NGX2 323 aa8.55□□□□□ -1.04
DDB1-221ENST00000543162 OR4A16Q8NH70 328 aa8.55□□□□□ -1.04
DDB1-221ENST00000543162 OR4A5Q8NH83 315 aa8.55□□□□□ -1.04
DDB1-221ENST00000543162 ZDHHC16Q969W1 377 aa8.55□□□□□ -1.04
DDB1-221ENST00000543162 FYTTD1Q96QD9 318 aaKnown RBP8.55□□□□□ -1.04
DDB1-221ENST00000543162 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.55□□□□□ -1.04
DDB1-221ENST00000543162 COA4Q9NYJ1 87 aa8.55□□□□□ -1.04
DDB1-221ENST00000543162 BET1LQ9NYM9 111 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms