RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 DDB2Q92466 427 aa11.28□□□□□ -0.6
SLC3A2-220ENST00000542922 SDSLQ96GA7 329 aa11.28□□□□□ -0.6
SLC3A2-220ENST00000542922 NPCDR1Q9BY65 106 aa11.28□□□□□ -0.6
SLC3A2-220ENST00000542922 UNKLQ9H9P5 680 aaKnown RBP11.28□□□□□ -0.6
SLC3A2-220ENST00000542922 SEBOXQ9HB31 216 aaPredicted RBP11.28□□□□□ -0.6
SLC3A2-220ENST00000542922 GFOD1Q9NXC2 390 aa11.28□□□□□ -0.6
SLC3A2-220ENST00000542922 IL19Q9UHD0 177 aa11.28□□□□□ -0.6
SLC3A2-220ENST00000542922 URGCP-MRPS24S4R325 110 aa11.28□□□□□ -0.6
SLC3A2-220ENST00000542922 KBTBD11-OT1A0A1B0GTJ5 212 aa11.27□□□□□ -0.6
SLC3A2-220ENST00000542922 MYOD1P15172 320 aa11.27□□□□□ -0.6
SLC3A2-220ENST00000542922 FOXC1Q12948 553 aa11.27□□□□□ -0.6
SLC3A2-220ENST00000542922 GCSAMLQ5JQS6 135 aa11.27□□□□□ -0.6
SLC3A2-220ENST00000542922 LHX4Q969G2 390 aa11.27□□□□□ -0.6
SLC3A2-220ENST00000542922 PINX1Q96BK5 328 aaKnown RBP11.27□□□□□ -0.6
SLC3A2-220ENST00000542922 TVP23CQ96ET8 276 aa11.27□□□□□ -0.6
SLC3A2-220ENST00000542922 CIB3Q96Q77 187 aaPredicted RBP11.27□□□□□ -0.6
SLC3A2-220ENST00000542922 ZNF251Q9BRH9 671 aa11.27□□□□□ -0.6
SLC3A2-220ENST00000542922 NIPSNAP3BQ9BS92 247 aa11.27□□□□□ -0.6
SLC3A2-220ENST00000542922 TMEM140Q9NV12 185 aa11.27□□□□□ -0.6
SLC3A2-220ENST00000542922 TIMM9Q9Y5J7 89 aa11.27□□□□□ -0.6
SLC3A2-220ENST00000542922 RRHO14718 337 aa11.27□□□□□ -0.61
SLC3A2-220ENST00000542922 RELBQ01201 579 aa11.27□□□□□ -0.61
SLC3A2-220ENST00000542922 VWC2Q2TAL6 325 aa11.27□□□□□ -0.61
SLC3A2-220ENST00000542922 RNF212Q495C1 297 aa11.27□□□□□ -0.61
SLC3A2-220ENST00000542922 TMEM170AQ8WVE7 144 aa11.27□□□□□ -0.61
SLC3A2-220ENST00000542922 S1PR3Q99500 378 aa11.27□□□□□ -0.61
SLC3A2-220ENST00000542922 SLC39A9Q9NUM3 307 aa11.27□□□□□ -0.61
SLC3A2-220ENST00000542922 TLN1Q9Y490 2541 aaKnown RBP11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 C16orf97H3BN30 126 aa11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 PRRG2O14669 202 aa11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 FCN3O75636 299 aa11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 CXCL1P09341 107 aa11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 MDKP21741 143 aaPredicted RBP11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 COL8A2P25067 703 aa11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 HOXA1P49639 335 aaPredicted RBP11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 SELENOVP59797 346 aa11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 BSPH1Q075Z2 132 aa11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 ADIPOQQ15848 244 aa11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 ATP6V1FQ16864 119 aa11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 MRGPRGQ86SM5 289 aa11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 LYG1Q8N1E2 194 aa11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 ZNF383Q8NA42 475 aa11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 OR10G4Q8NGN3 311 aa11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 OR10G9Q8NGN4 311 aa11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 OR10G7Q8NGN6 311 aa11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 OR4A16Q8NH70 328 aa11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 Q8WTZ3 238 aa11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 LRFN3Q9BTN0 628 aa11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 TNCP24821 2201 aa11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 OR4A8P0C604 315 aa11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 VDAC2P45880 294 aaPredicted RBP11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 CD81P60033 236 aa11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 GNB2P62879 340 aa11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 AARDQ4LEZ3 155 aa11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 GFRALQ6UXV0 394 aa11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 HEPN1Q6WQI6 88 aa11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 ZNF788Q6ZQV5 615 aa11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 SPACA3Q8IXA5 215 aa11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 ABHD12Q8N2K0 398 aa11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 ZNF439Q8NDP4 499 aa11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 NUP37Q8NFH4 326 aa11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 VAX2Q9UIW0 290 aa11.26□□□□□ -0.61
SLC3A2-220ENST00000542922 PTPRQQ9UMZ3 2332 aa11.25□□□□□ -0.61
SLC3A2-220ENST00000542922 TRGV10A0A0A0MS01 117 aa11.25□□□□□ -0.61
SLC3A2-220ENST00000542922 PCP4L1A6NKN8 68 aa11.25□□□□□ -0.61
SLC3A2-220ENST00000542922 TMEM108Q6UXF1 575 aa11.25□□□□□ -0.61
SLC3A2-220ENST00000542922 SLC35E3Q7Z769 313 aa11.25□□□□□ -0.61
SLC3A2-220ENST00000542922 TGIF2-C20orf24A0A0A6YYL0 155 aa11.24□□□□□ -0.61
SLC3A2-220ENST00000542922 RBFOX2O43251 390 aaKnown RBP eCLIP11.24□□□□□ -0.61
SLC3A2-220ENST00000542922 IFNA10P01566 189 aa11.24□□□□□ -0.61
SLC3A2-220ENST00000542922 NQO2P16083 231 aa11.24□□□□□ -0.61
SLC3A2-220ENST00000542922 SPCS3P61009 180 aa11.24□□□□□ -0.61
SLC3A2-220ENST00000542922 ERVK-16P61578 105 aa11.24□□□□□ -0.61
SLC3A2-220ENST00000542922 ELOBQ15370 118 aa11.24□□□□□ -0.61
SLC3A2-220ENST00000542922 IQCF2Q8IXL9 164 aa11.24□□□□□ -0.61
SLC3A2-220ENST00000542922 RAB24Q969Q5 203 aa11.24□□□□□ -0.61
SLC3A2-220ENST00000542922 SSX3Q99909 188 aa11.24□□□□□ -0.61
SLC3A2-220ENST00000542922 ARFGEF3Q5TH69 2177 aa11.24□□□□□ -0.61
SLC3A2-220ENST00000542922 POLEQ07864 2286 aa11.24□□□□□ -0.61
SLC3A2-220ENST00000542922 CTXND1A0A1B0GTU2 59 aa11.24□□□□□ -0.61
SLC3A2-220ENST00000542922 SMCO3A2RU48 225 aa11.24□□□□□ -0.61
SLC3A2-220ENST00000542922 C5orf52A6NGY3 159 aa11.24□□□□□ -0.61
SLC3A2-220ENST00000542922 TMPRSS2O15393 492 aa11.24□□□□□ -0.61
SLC3A2-220ENST00000542922 GFRA3O60609 400 aa11.24□□□□□ -0.61
SLC3A2-220ENST00000542922 TNFSF4P23510 183 aa11.24□□□□□ -0.61
SLC3A2-220ENST00000542922 MAS1LP35410 378 aa11.24□□□□□ -0.61
SLC3A2-220ENST00000542922 MRPS11P82912 194 aaKnown RBP11.24□□□□□ -0.61
SLC3A2-220ENST00000542922 ZCCHC14Q8WYQ9 949 aaKnown RBP11.24□□□□□ -0.61
SLC3A2-220ENST00000542922 HEYLQ9NQ87 328 aaPredicted RBP11.24□□□□□ -0.61
SLC3A2-220ENST00000542922 TCF19Q9Y242 345 aa11.24□□□□□ -0.61
SLC3A2-220ENST00000542922 A0A087WWC5 75 aa11.23□□□□□ -0.61
SLC3A2-220ENST00000542922 PRSS46E5RG02 174 aa11.23□□□□□ -0.61
SLC3A2-220ENST00000542922 NDUFB7P17568 137 aa11.23□□□□□ -0.61
SLC3A2-220ENST00000542922 TBR1Q16650 682 aa11.23□□□□□ -0.61
SLC3A2-220ENST00000542922 OR4A47Q6IF82 309 aa11.23□□□□□ -0.61
SLC3A2-220ENST00000542922 RBMS3Q6XE24 437 aaKnown RBP11.23□□□□□ -0.61
SLC3A2-220ENST00000542922 OR4S2Q8NH73 311 aa11.23□□□□□ -0.61
SLC3A2-220ENST00000542922 NEUROG1Q92886 237 aa11.23□□□□□ -0.61
SLC3A2-220ENST00000542922 IDI2-AS1Q9NZ38 188 aa11.23□□□□□ -0.61
SLC3A2-220ENST00000542922 WDR83OSQ9Y284 106 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms