RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 ZNF726P1Q15940 193 aa11.6□□□□□ -0.55
LDB3-207ENST00000542786 ZNF672Q499Z4 452 aaPredicted RBP11.6□□□□□ -0.55
LDB3-207ENST00000542786 AKR1C8PQ5T2L2 129 aa11.6□□□□□ -0.55
LDB3-207ENST00000542786 OR8G2PQ6IF36 304 aa11.6□□□□□ -0.55
LDB3-207ENST00000542786 ZNF833PQ6ZTB9 187 aa11.6□□□□□ -0.55
LDB3-207ENST00000542786 SSX9Q7RTT3 188 aa11.6□□□□□ -0.55
LDB3-207ENST00000542786 LILRB2Q8N423 598 aa11.6□□□□□ -0.55
LDB3-207ENST00000542786 ZNF596Q8TC21 504 aa11.6□□□□□ -0.55
LDB3-207ENST00000542786 SCGB1C1Q8TD33 95 aa11.6□□□□□ -0.55
LDB3-207ENST00000542786 TAF15Q92804 592 aaKnown RBP eCLIP11.6□□□□□ -0.55
LDB3-207ENST00000542786 TMEM147Q9BVK8 224 aa11.6□□□□□ -0.55
LDB3-207ENST00000542786 GAL3ST2Q9H3Q3 398 aa11.6□□□□□ -0.55
LDB3-207ENST00000542786 VSIRQ9H7M9 311 aa11.6□□□□□ -0.55
LDB3-207ENST00000542786 RPRMQ9NS64 109 aa11.6□□□□□ -0.55
LDB3-207ENST00000542786 CISD1Q9NZ45 108 aaKnown RBP11.6□□□□□ -0.55
LDB3-207ENST00000542786 TIMM9Q9Y5J7 89 aa11.6□□□□□ -0.55
LDB3-207ENST00000542786 ANKHD1Q8IWZ3 2542 aaKnown RBP11.6□□□□□ -0.55
LDB3-207ENST00000542786 NUPL2O15504 423 aaKnown RBP11.59□□□□□ -0.55
LDB3-207ENST00000542786 H2AFB1P0C5Y9 115 aa11.59□□□□□ -0.55
LDB3-207ENST00000542786 GNB2P62879 340 aa11.59□□□□□ -0.55
LDB3-207ENST00000542786 PEA15Q15121 130 aa11.59□□□□□ -0.55
LDB3-207ENST00000542786 ATP6V1FQ16864 119 aa11.59□□□□□ -0.55
LDB3-207ENST00000542786 ZNF429Q86V71 674 aa11.59□□□□□ -0.55
LDB3-207ENST00000542786 ZNF714Q96N38 554 aa11.59□□□□□ -0.55
LDB3-207ENST00000542786 KIAA1456Q9P272 454 aa11.59□□□□□ -0.55
LDB3-207ENST00000542786 UBE2L5PA0A1B0GUS4 154 aa11.59□□□□□ -0.55
LDB3-207ENST00000542786 CEBPZOSA8MTT3 80 aa11.59□□□□□ -0.55
LDB3-207ENST00000542786 DVL1O14640 695 aa11.59□□□□□ -0.55
LDB3-207ENST00000542786 NDUFB3O43676 98 aa11.59□□□□□ -0.55
LDB3-207ENST00000542786 FSTL3O95633 263 aa11.59□□□□□ -0.55
LDB3-207ENST00000542786 DAOP14920 347 aa11.59□□□□□ -0.55
LDB3-207ENST00000542786 PPT1P50897 306 aa11.59□□□□□ -0.55
LDB3-207ENST00000542786 ERVK-16P61578 105 aa11.59□□□□□ -0.55
LDB3-207ENST00000542786 C8orf31Q8N9H6 132 aa11.59□□□□□ -0.55
LDB3-207ENST00000542786 TMEM170AQ8WVE7 144 aa11.59□□□□□ -0.55
LDB3-207ENST00000542786 MBD3L1Q8WWY6 194 aa11.59□□□□□ -0.55
LDB3-207ENST00000542786 ZZEF1O43149 2961 aa11.58□□□□□ -0.56
LDB3-207ENST00000542786 A0A1B0GV50 99 aa11.58□□□□□ -0.56
LDB3-207ENST00000542786 LOC105371267A0A1B0GV96 52 aa11.58□□□□□ -0.56
LDB3-207ENST00000542786 C15orf61A6NNL5 157 aa11.58□□□□□ -0.56
LDB3-207ENST00000542786 PRSS46E5RG02 174 aa11.58□□□□□ -0.56
LDB3-207ENST00000542786 LY86O95711 162 aa11.58□□□□□ -0.56
LDB3-207ENST00000542786 SERF2P84101 59 aa11.58□□□□□ -0.56
LDB3-207ENST00000542786 TMEM155Q4W5P6 130 aa11.58□□□□□ -0.56
LDB3-207ENST00000542786 LRRC10Q5BKY1 277 aa11.58□□□□□ -0.56
LDB3-207ENST00000542786 DHRS7BQ6IAN0 325 aaPredicted RBP11.58□□□□□ -0.56
LDB3-207ENST00000542786 OR4A47Q6IF82 309 aa11.58□□□□□ -0.56
LDB3-207ENST00000542786 SSX7Q7RTT5 188 aa11.58□□□□□ -0.56
LDB3-207ENST00000542786 RBMXL1Q96E39 390 aaKnown RBP11.58□□□□□ -0.56
LDB3-207ENST00000542786 RARRES2Q99969 163 aa11.58□□□□□ -0.56
LDB3-207ENST00000542786 TMEM14BQ9NUH8 114 aa11.58□□□□□ -0.56
LDB3-207ENST00000542786 FOXA2Q9Y261 457 aaPredicted RBP11.58□□□□□ -0.56
LDB3-207ENST00000542786 KPTNQ9Y664 436 aa11.58□□□□□ -0.56
LDB3-207ENST00000542786 ADGRG4Q8IZF6 3080 aa11.58□□□□□ -0.56
LDB3-207ENST00000542786 CHD8Q9HCK8 2581 aa11.58□□□□□ -0.56
LDB3-207ENST00000542786 SNAPINO95295 136 aa11.57□□□□□ -0.56
LDB3-207ENST00000542786 SLC25A24Q6NUK1 477 aa11.57□□□□□ -0.56
LDB3-207ENST00000542786 UNQ6494/PRO21346Q6UXR6 183 aa11.57□□□□□ -0.56
LDB3-207ENST00000542786 MUC15Q8N387 334 aa11.57□□□□□ -0.56
LDB3-207ENST00000542786 C11orf42Q8N5U0 333 aa11.57□□□□□ -0.56
LDB3-207ENST00000542786 LINC00311Q8N616 119 aa11.57□□□□□ -0.56
LDB3-207ENST00000542786 Q8N7P7 452 aa11.57□□□□□ -0.56
LDB3-207ENST00000542786 CLRN3Q8NCR9 226 aa11.57□□□□□ -0.56
LDB3-207ENST00000542786 OR4A16Q8NH70 328 aa11.57□□□□□ -0.56
LDB3-207ENST00000542786 PINX1Q96BK5 328 aaKnown RBP11.57□□□□□ -0.56
LDB3-207ENST00000542786 RHOVQ96L33 236 aa11.57□□□□□ -0.56
LDB3-207ENST00000542786 PBDC1Q9BVG4 233 aa11.57□□□□□ -0.56
LDB3-207ENST00000542786 SMDT1Q9H4I9 107 aa11.57□□□□□ -0.56
LDB3-207ENST00000542786 TCF19Q9Y242 345 aa11.57□□□□□ -0.56
LDB3-207ENST00000542786 TET2Q6N021 2002 aaPredicted RBP11.57□□□□□ -0.56
LDB3-207ENST00000542786 A0A087X0M5 115 aa11.57□□□□□ -0.56
LDB3-207ENST00000542786 A0A1B0GX30 115 aa11.57□□□□□ -0.56
LDB3-207ENST00000542786 RBFOX3A6NFN3 312 aa11.57□□□□□ -0.56
LDB3-207ENST00000542786 NDUFA2O43678 99 aa11.57□□□□□ -0.56
LDB3-207ENST00000542786 RBMXL2O75526 392 aaKnown RBP11.57□□□□□ -0.56
LDB3-207ENST00000542786 PPOXP50336 477 aa11.57□□□□□ -0.56
LDB3-207ENST00000542786 TAGLNQ01995 201 aaKnown RBP11.57□□□□□ -0.56
LDB3-207ENST00000542786 TLE4Q04727 773 aa11.57□□□□□ -0.56
LDB3-207ENST00000542786 LY6DQ14210 128 aa11.57□□□□□ -0.56
LDB3-207ENST00000542786 ZNF506Q5JVG8 444 aa11.57□□□□□ -0.56
LDB3-207ENST00000542786 OR10P1Q8NGE3 313 aa11.57□□□□□ -0.56
LDB3-207ENST00000542786 CLDND2Q8NHS1 167 aa11.57□□□□□ -0.56
LDB3-207ENST00000542786 SFT2D1Q8WV19 159 aa11.57□□□□□ -0.56
LDB3-207ENST00000542786 RCC1LQ96I51 464 aaKnown RBP11.57□□□□□ -0.56
LDB3-207ENST00000542786 EIF5A2Q9GZV4 153 aaKnown RBP11.57□□□□□ -0.56
LDB3-207ENST00000542786 DOCK11Q5JSL3 2073 aa11.56□□□□□ -0.56
LDB3-207ENST00000542786 IFNA17P01571 189 aa11.56□□□□□ -0.56
LDB3-207ENST00000542786 IGKV1D-33P01593 117 aa11.56□□□□□ -0.56
LDB3-207ENST00000542786 IGKV1-33P01594 117 aa11.56□□□□□ -0.56
LDB3-207ENST00000542786 COL8A2P25067 703 aa11.56□□□□□ -0.56
LDB3-207ENST00000542786 RPS16P62249 146 aaKnown RBP11.56□□□□□ -0.56
LDB3-207ENST00000542786 ICAM4Q14773 271 aa11.56□□□□□ -0.56
LDB3-207ENST00000542786 TMEM41BQ5BJD5 291 aa11.56□□□□□ -0.56
LDB3-207ENST00000542786 ACSM6Q6P461 480 aa11.56□□□□□ -0.56
LDB3-207ENST00000542786 ST6GALNAC6Q969X2 333 aa11.56□□□□□ -0.56
LDB3-207ENST00000542786 MRPL20Q9BYC9 149 aaKnown RBP11.56□□□□□ -0.56
LDB3-207ENST00000542786 SLC35B3Q9H1N7 401 aa11.56□□□□□ -0.56
LDB3-207ENST00000542786 SRRM4A7MD48 611 aaKnown RBP11.55□□□□□ -0.56
LDB3-207ENST00000542786 LYNX1G3V0Z9 82 aa11.55□□□□□ -0.56
LDB3-207ENST00000542786 TSPAN4O14817 238 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms