RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 RAB2BQ8WUD1 216 aa0.54□□□□□ -2.32
KNTC1-213ENST00000542727 C19orf60Q96EN9 201 aa0.54□□□□□ -2.32
KNTC1-213ENST00000542727 CPNE2Q96FN4 548 aaPredicted RBP0.54□□□□□ -2.32
KNTC1-213ENST00000542727 NDEL1Q9GZM8 345 aa0.54□□□□□ -2.32
KNTC1-213ENST00000542727 TMEM222Q9H0R3 208 aa0.54□□□□□ -2.32
KNTC1-213ENST00000542727 KLK5Q9Y337 293 aaPredicted RBP0.54□□□□□ -2.32
KNTC1-213ENST00000542727 RBM7Q9Y580 266 aaKnown RBP0.54□□□□□ -2.32
KNTC1-213ENST00000542727 STRCQ7RTU9 1775 aa0.54□□□□□ -2.32
KNTC1-213ENST00000542727 DIDO1Q9BTC0 2240 aaKnown RBP0.54□□□□□ -2.32
KNTC1-213ENST00000542727 KIF13BQ9NQT8 1826 aa0.54□□□□□ -2.32
KNTC1-213ENST00000542727 TNRC6BQ9UPQ9 1833 aaKnown RBP0.54□□□□□ -2.32
KNTC1-213ENST00000542727 A0A1W2PP64 1363 aa0.54□□□□□ -2.32
KNTC1-213ENST00000542727 DOCK5Q9H7D0 1870 aa0.54□□□□□ -2.32
KNTC1-213ENST00000542727 ZFC3H1O60293 1989 aaKnown RBP0.54□□□□□ -2.32
KNTC1-213ENST00000542727 LAMB4A4D0S4 1761 aa0.53□□□□□ -2.32
KNTC1-213ENST00000542727 TMED7-TICAM2A0A0A6YYA0 188 aa0.53□□□□□ -2.32
KNTC1-213ENST00000542727 TMEM269A0A1B0GVZ9 245 aa0.53□□□□□ -2.32
KNTC1-213ENST00000542727 ERICH2A1L162 156 aa0.53□□□□□ -2.32
KNTC1-213ENST00000542727 OR6C6A6NF89 314 aa0.53□□□□□ -2.32
KNTC1-213ENST00000542727 MKRN2OSH3BPM6 223 aa0.53□□□□□ -2.32
KNTC1-213ENST00000542727 YKT6O15498 198 aa0.53□□□□□ -2.32
KNTC1-213ENST00000542727 STX10O60499 249 aa0.53□□□□□ -2.32
KNTC1-213ENST00000542727 CIAO1O76071 339 aa0.53□□□□□ -2.32
KNTC1-213ENST00000542727 MT-CO2P00403 227 aa0.53□□□□□ -2.32
KNTC1-213ENST00000542727 LGALS1P09382 135 aaKnown RBP0.53□□□□□ -2.32
KNTC1-213ENST00000542727 IL9P15248 144 aa0.53□□□□□ -2.32
KNTC1-213ENST00000542727 ALDH3A1P30838 453 aa0.53□□□□□ -2.32
KNTC1-213ENST00000542727 CD79BP40259 229 aa0.53□□□□□ -2.32
KNTC1-213ENST00000542727 SLCO1A2P46721 670 aa0.53□□□□□ -2.32
KNTC1-213ENST00000542727 FXYD7P58549 80 aa0.53□□□□□ -2.32
KNTC1-213ENST00000542727 TAS2R20P59543 309 aa0.53□□□□□ -2.32
KNTC1-213ENST00000542727 HLA-DRB3P79483 266 aa0.53□□□□□ -2.32
KNTC1-213ENST00000542727 HOXC5Q00444 222 aa0.53□□□□□ -2.32
KNTC1-213ENST00000542727 PRB3Q04118 309 aaPredicted RBP0.53□□□□□ -2.32
KNTC1-213ENST00000542727 MOGQ16653 247 aa0.53□□□□□ -2.32
KNTC1-213ENST00000542727 LRRC75BQ2VPJ9 315 aa0.53□□□□□ -2.32
KNTC1-213ENST00000542727 C9orf64Q5T6V5 341 aa0.53□□□□□ -2.32
KNTC1-213ENST00000542727 FAM173BQ6P4H8 233 aa0.53□□□□□ -2.32
KNTC1-213ENST00000542727 LYZL1Q6UWQ5 148 aa0.53□□□□□ -2.32
KNTC1-213ENST00000542727 MBD3L1Q8WWY6 194 aa0.53□□□□□ -2.32
KNTC1-213ENST00000542727 SLC7A6Q92536 515 aa0.53□□□□□ -2.32
KNTC1-213ENST00000542727 ANKRD36BP1Q96IX9 119 aa0.53□□□□□ -2.32
KNTC1-213ENST00000542727 ADAT1Q9BUB4 502 aaKnown RBP0.53□□□□□ -2.32
KNTC1-213ENST00000542727 BBS2Q9BXC9 721 aa0.53□□□□□ -2.32
KNTC1-213ENST00000542727 NAT8Q9UHE5 227 aa0.53□□□□□ -2.32
KNTC1-213ENST00000542727 TNRC6AQ8NDV7 1962 aaKnown RBP0.53□□□□□ -2.32
KNTC1-213ENST00000542727 TECTAO75443 2155 aa0.53□□□□□ -2.32
KNTC1-213ENST00000542727 ALPK2Q86TB3 2170 aa0.53□□□□□ -2.32
KNTC1-213ENST00000542727 CUL9Q8IWT3 2517 aa0.53□□□□□ -2.33
KNTC1-213ENST00000542727 DENND4CQ5VZ89 1909 aa0.52□□□□□ -2.33
KNTC1-213ENST00000542727 IGHV1-18A0A0C4DH31 117 aa0.52□□□□□ -2.33
KNTC1-213ENST00000542727 A0A0D9SEW6 157 aa0.52□□□□□ -2.33
KNTC1-213ENST00000542727 C5orf49A4QMS7 147 aa0.52□□□□□ -2.33
KNTC1-213ENST00000542727 C9JCJ5 164 aa0.52□□□□□ -2.33
KNTC1-213ENST00000542727 FTCDNL1E5RQL4 147 aa0.52□□□□□ -2.33
KNTC1-213ENST00000542727 F8VZ95 297 aa0.52□□□□□ -2.33
KNTC1-213ENST00000542727 H7C2G1 150 aa0.52□□□□□ -2.33
KNTC1-213ENST00000542727 TOX3O15405 576 aaPredicted RBP0.52□□□□□ -2.33
KNTC1-213ENST00000542727 SERPINA7P05543 415 aa0.52□□□□□ -2.33
KNTC1-213ENST00000542727 RPSAP08865 295 aaKnown RBP0.52□□□□□ -2.33
KNTC1-213ENST00000542727 TRGC1P0CF51 173 aa0.52□□□□□ -2.33
KNTC1-213ENST00000542727 PSMB8P28062 276 aa0.52□□□□□ -2.33
KNTC1-213ENST00000542727 CCR7P32248 378 aa0.52□□□□□ -2.33
KNTC1-213ENST00000542727 RPL28P46779 137 aaKnown RBP0.52□□□□□ -2.33
KNTC1-213ENST00000542727 EMP1P54849 157 aa0.52□□□□□ -2.33
KNTC1-213ENST00000542727 RAB14P61106 215 aa0.52□□□□□ -2.33
KNTC1-213ENST00000542727 FABP5Q01469 135 aa0.52□□□□□ -2.33
KNTC1-213ENST00000542727 MIAQ16674 131 aa0.52□□□□□ -2.33
KNTC1-213ENST00000542727 ARHGAP11BQ3KRB8 267 aa0.52□□□□□ -2.33
KNTC1-213ENST00000542727 UNQ6190/PRO20217Q6UXQ8 127 aa0.52□□□□□ -2.33
KNTC1-213ENST00000542727 NAA40Q86UY6 237 aa0.52□□□□□ -2.33
KNTC1-213ENST00000542727 RPS19BP1Q86WX3 136 aaKnown RBP0.52□□□□□ -2.33
KNTC1-213ENST00000542727 FUNDC1Q8IVP5 155 aa0.52□□□□□ -2.33
KNTC1-213ENST00000542727 TMEM86AQ8N2M4 240 aa0.52□□□□□ -2.33
KNTC1-213ENST00000542727 C15orf53Q8NAA6 179 aa0.52□□□□□ -2.33
KNTC1-213ENST00000542727 LFNGQ8NES3 379 aa0.52□□□□□ -2.33
KNTC1-213ENST00000542727 OR5B17Q8NGF7 314 aa0.52□□□□□ -2.33
KNTC1-213ENST00000542727 CYSTM1Q9H1C7 97 aa0.52□□□□□ -2.33
KNTC1-213ENST00000542727 CD300AQ9UGN4 299 aa0.52□□□□□ -2.33
KNTC1-213ENST00000542727 TRAV7A0A075B6U4 112 aa0.51□□□□□ -2.33
KNTC1-213ENST00000542727 IGKV2D-26A0A0A0MRZ7 120 aa0.51□□□□□ -2.33
KNTC1-213ENST00000542727 A0A0J9YW62 118 aa0.51□□□□□ -2.33
KNTC1-213ENST00000542727 COX7A2LO14548 114 aa0.51□□□□□ -2.33
KNTC1-213ENST00000542727 ATP8B1O43520 1251 aa0.51□□□□□ -2.33
KNTC1-213ENST00000542727 NEMFO60524 1076 aa0.51□□□□□ -2.33
KNTC1-213ENST00000542727 SCN2BO60939 215 aa0.51□□□□□ -2.33
KNTC1-213ENST00000542727 ORM1P02763 201 aa0.51□□□□□ -2.33
KNTC1-213ENST00000542727 HAAOP46952 286 aa0.51□□□□□ -2.33
KNTC1-213ENST00000542727 SNAP25P60880 206 aa0.51□□□□□ -2.33
KNTC1-213ENST00000542727 RPL30P62888 115 aaKnown RBP0.51□□□□□ -2.33
KNTC1-213ENST00000542727 PLCXD2Q0VAA5 305 aa0.51□□□□□ -2.33
KNTC1-213ENST00000542727 NUP160Q12769 1436 aa0.51□□□□□ -2.33
KNTC1-213ENST00000542727 JOSD1Q15040 202 aaPredicted RBP0.51□□□□□ -2.33
KNTC1-213ENST00000542727 ELOBQ15370 118 aa0.51□□□□□ -2.33
KNTC1-213ENST00000542727 FAM27BQ5VT28 67 aa0.51□□□□□ -2.33
KNTC1-213ENST00000542727 GPHB5Q86YW7 130 aa0.51□□□□□ -2.33
KNTC1-213ENST00000542727 EEF1AKMT1Q8WVE0 214 aa0.51□□□□□ -2.33
KNTC1-213ENST00000542727 TESCQ96BS2 214 aa0.51□□□□□ -2.33
KNTC1-213ENST00000542727 ABCC12Q96J65 1359 aa0.51□□□□□ -2.33
KNTC1-213ENST00000542727 DCUN1D5Q9BTE7 237 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms