RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 ZNF672Q499Z4 452 aaPredicted RBP8.47□□□□□ -1.05
TOP3A-208ENST00000542570 FOXL2NBQ6ZUU3 175 aa8.47□□□□□ -1.05
TOP3A-208ENST00000542570 LHFPL4Q7Z7J7 247 aa8.47□□□□□ -1.05
TOP3A-208ENST00000542570 OR1B1Q8NGR6 318 aa8.47□□□□□ -1.05
TOP3A-208ENST00000542570 RNF138Q8WVD3 245 aa8.47□□□□□ -1.05
TOP3A-208ENST00000542570 OR2A7Q96R45 310 aa8.47□□□□□ -1.05
TOP3A-208ENST00000542570 FBXL15Q9H469 300 aa8.47□□□□□ -1.05
TOP3A-208ENST00000542570 IGKV1D-17A0A075B6S4 117 aa8.46□□□□□ -1.05
TOP3A-208ENST00000542570 A0A1B0GU03 582 aa8.46□□□□□ -1.05
TOP3A-208ENST00000542570 LEUTXA8MZ59 168 aa8.46□□□□□ -1.05
TOP3A-208ENST00000542570 MUC1P15941 1255 aaPredicted RBP8.46□□□□□ -1.05
TOP3A-208ENST00000542570 GATA2P23769 480 aaPredicted RBP8.46□□□□□ -1.05
TOP3A-208ENST00000542570 SULT1A1P50225 295 aa8.46□□□□□ -1.05
TOP3A-208ENST00000542570 ZNF273Q14593 569 aa8.46□□□□□ -1.05
TOP3A-208ENST00000542570 IGFL3Q6UXB1 125 aa8.46□□□□□ -1.05
TOP3A-208ENST00000542570 COLCA1Q6ZS62 124 aa8.46□□□□□ -1.05
TOP3A-208ENST00000542570 C22orf34Q6ZV56 151 aa8.46□□□□□ -1.05
TOP3A-208ENST00000542570 SEM1Q6ZVN7 128 aa8.46□□□□□ -1.05
TOP3A-208ENST00000542570 CMTM2Q8TAZ6 248 aa8.46□□□□□ -1.05
TOP3A-208ENST00000542570 METTL1Q9UBP6 276 aaKnown RBP8.46□□□□□ -1.05
TOP3A-208ENST00000542570 LINC00527Q9UJ94 153 aa8.46□□□□□ -1.05
TOP3A-208ENST00000542570 WSB1Q9Y6I7 421 aa8.46□□□□□ -1.05
TOP3A-208ENST00000542570 HPRT1P00492 218 aa8.46□□□□□ -1.06
TOP3A-208ENST00000542570 CLEC3BP05452 202 aa8.46□□□□□ -1.06
TOP3A-208ENST00000542570 FGF2P09038 288 aa8.46□□□□□ -1.06
TOP3A-208ENST00000542570 FBP1P09467 338 aa8.46□□□□□ -1.06
TOP3A-208ENST00000542570 P2RY1P47900 373 aa8.46□□□□□ -1.06
TOP3A-208ENST00000542570 TUSC1Q2TAM9 212 aa8.46□□□□□ -1.06
TOP3A-208ENST00000542570 ZNF561Q8N587 486 aa8.46□□□□□ -1.06
TOP3A-208ENST00000542570 OR4P4Q8NGL7 312 aa8.46□□□□□ -1.06
TOP3A-208ENST00000542570 DIRC2Q96SL1 478 aa8.46□□□□□ -1.06
TOP3A-208ENST00000542570 GAB2Q9UQC2 676 aa8.46□□□□□ -1.06
TOP3A-208ENST00000542570 TNRC18O15417 2968 aaPredicted RBP8.46□□□□□ -1.06
TOP3A-208ENST00000542570 SORL1Q92673 2214 aa8.46□□□□□ -1.06
TOP3A-208ENST00000542570 SLC31A2O15432 143 aa8.46□□□□□ -1.06
TOP3A-208ENST00000542570 IGHV3-23P01764 117 aa8.46□□□□□ -1.06
TOP3A-208ENST00000542570 CEACAM3P40198 252 aa8.46□□□□□ -1.06
TOP3A-208ENST00000542570 THBS3P49746 956 aa8.46□□□□□ -1.06
TOP3A-208ENST00000542570 RPL30P62888 115 aaKnown RBP8.46□□□□□ -1.06
TOP3A-208ENST00000542570 C10orf55Q5SWW7 151 aa8.46□□□□□ -1.06
TOP3A-208ENST00000542570 H1FOOQ8IZA3 346 aaPredicted RBP8.46□□□□□ -1.06
TOP3A-208ENST00000542570 COQ2Q96H96 371 aa8.46□□□□□ -1.06
TOP3A-208ENST00000542570 DUX5Q96PT3 197 aa8.46□□□□□ -1.06
TOP3A-208ENST00000542570 MRPL20Q9BYC9 149 aaKnown RBP8.46□□□□□ -1.06
TOP3A-208ENST00000542570 RYDENQ9NUL5 291 aaKnown RBP8.46□□□□□ -1.06
TOP3A-208ENST00000542570 KBTBD11-OT1A0A1B0GTJ5 212 aa8.45□□□□□ -1.06
TOP3A-208ENST00000542570 CEACAM18A8MTB9 384 aa8.45□□□□□ -1.06
TOP3A-208ENST00000542570 SRRM5B3KS81 715 aa8.45□□□□□ -1.06
TOP3A-208ENST00000542570 J3KRW8 73 aa8.45□□□□□ -1.06
TOP3A-208ENST00000542570 HOXD11P31277 338 aaPredicted RBP8.45□□□□□ -1.06
TOP3A-208ENST00000542570 CA7P43166 264 aa8.45□□□□□ -1.06
TOP3A-208ENST00000542570 PJVKQ0ZLH3 352 aa8.45□□□□□ -1.06
TOP3A-208ENST00000542570 HERPUD1Q15011 391 aa8.45□□□□□ -1.06
TOP3A-208ENST00000542570 MIC13Q5XKP0 118 aa8.45□□□□□ -1.06
TOP3A-208ENST00000542570 DHRS11Q6UWP2 260 aa8.45□□□□□ -1.06
TOP3A-208ENST00000542570 ZNF497Q6ZNH5 498 aa8.45□□□□□ -1.06
TOP3A-208ENST00000542570 UHRF2Q96PU4 802 aa8.45□□□□□ -1.06
TOP3A-208ENST00000542570 CCL19Q99731 98 aa8.45□□□□□ -1.06
TOP3A-208ENST00000542570 NKX6-2Q9C056 277 aaPredicted RBP8.45□□□□□ -1.06
TOP3A-208ENST00000542570 PARP11Q9NR21 331 aa8.45□□□□□ -1.06
TOP3A-208ENST00000542570 TRBV6-7A0A0A0MS04 114 aa8.45□□□□□ -1.06
TOP3A-208ENST00000542570 IGSF23A1L1A6 192 aa8.45□□□□□ -1.06
TOP3A-208ENST00000542570 C1orf196B1AJZ1 125 aa8.45□□□□□ -1.06
TOP3A-208ENST00000542570 J3QW42 95 aa8.45□□□□□ -1.06
TOP3A-208ENST00000542570 CT45A6P0DMU7 189 aa8.45□□□□□ -1.06
TOP3A-208ENST00000542570 CT45A5P0DMU8 189 aa8.45□□□□□ -1.06
TOP3A-208ENST00000542570 CT45A7P0DMV0 189 aa8.45□□□□□ -1.06
TOP3A-208ENST00000542570 SRP14P37108 136 aaKnown RBP8.45□□□□□ -1.06
TOP3A-208ENST00000542570 KLRD1Q13241 179 aa8.45□□□□□ -1.06
TOP3A-208ENST00000542570 CT45A1Q5HYN5 189 aa8.45□□□□□ -1.06
TOP3A-208ENST00000542570 C1orf174Q8IYL3 243 aa8.45□□□□□ -1.06
TOP3A-208ENST00000542570 CT45A3Q8NHU0 189 aa8.45□□□□□ -1.06
TOP3A-208ENST00000542570 FGF23Q9GZV9 251 aaPredicted RBP8.45□□□□□ -1.06
TOP3A-208ENST00000542570 IGHV3-49A0A0A0MS15 119 aa8.45□□□□□ -1.06
TOP3A-208ENST00000542570 HTR1DP28221 377 aa8.45□□□□□ -1.06
TOP3A-208ENST00000542570 TNFRSF9Q07011 255 aa8.45□□□□□ -1.06
TOP3A-208ENST00000542570 FAM209AQ5JX71 171 aa8.45□□□□□ -1.06
TOP3A-208ENST00000542570 DAZAP1Q96EP5 407 aaKnown RBP8.45□□□□□ -1.06
TOP3A-208ENST00000542570 NEIL1Q96FI4 390 aaPredicted RBP8.45□□□□□ -1.06
TOP3A-208ENST00000542570 ARPC4-TTLL3A0A0A6YYG9 625 aa8.44□□□□□ -1.06
TOP3A-208ENST00000542570 IGKV1-6A0A0C4DH72 117 aa8.44□□□□□ -1.06
TOP3A-208ENST00000542570 HTD2P86397 168 aa8.44□□□□□ -1.06
TOP3A-208ENST00000542570 ADTRPQ96IZ2 230 aa8.44□□□□□ -1.06
TOP3A-208ENST00000542570 ATP5SQ99766 215 aa8.44□□□□□ -1.06
TOP3A-208ENST00000542570 RNF126Q9BV68 326 aa8.44□□□□□ -1.06
TOP3A-208ENST00000542570 LPAR3Q9UBY5 353 aa8.44□□□□□ -1.06
TOP3A-208ENST00000542570 TCF19Q9Y242 345 aa8.44□□□□□ -1.06
TOP3A-208ENST00000542570 SAA2-SAA4A0A096LPE2 208 aa8.44□□□□□ -1.06
TOP3A-208ENST00000542570 SCGB2A1O75556 95 aa8.44□□□□□ -1.06
TOP3A-208ENST00000542570 SAA2P0DJI9 122 aaPredicted RBP8.44□□□□□ -1.06
TOP3A-208ENST00000542570 CDC34P49427 236 aaPredicted RBP8.44□□□□□ -1.06
TOP3A-208ENST00000542570 B2MP61769 119 aa8.44□□□□□ -1.06
TOP3A-208ENST00000542570 CBLN2Q8IUK8 224 aa8.44□□□□□ -1.06
TOP3A-208ENST00000542570 PPP1R14DQ9NXH3 145 aa8.44□□□□□ -1.06
TOP3A-208ENST00000542570 FBLN5Q9UBX5 448 aa8.44□□□□□ -1.06
TOP3A-208ENST00000542570 A0A1W2PPQ1 181 aa8.44□□□□□ -1.06
TOP3A-208ENST00000542570 RNF222A6NCQ9 220 aa8.44□□□□□ -1.06
TOP3A-208ENST00000542570 CHRNA7P36544 502 aa8.44□□□□□ -1.06
TOP3A-208ENST00000542570 RPL8P62917 257 aaKnown RBP8.44□□□□□ -1.06
TOP3A-208ENST00000542570 MORN2Q502X0 79 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms