RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 SPDEFO95238 335 aa18.45■□□□□ 0.54
HOMER3-205ENST00000542541 DHFRP00374 187 aa18.45■□□□□ 0.54
HOMER3-205ENST00000542541 HLA-AP01891 365 aaKnown RBP18.45■□□□□ 0.54
HOMER3-205ENST00000542541 VSIG10L2P0DP72 767 aa18.45■□□□□ 0.54
HOMER3-205ENST00000542541 NQO2P16083 231 aa18.45■□□□□ 0.54
HOMER3-205ENST00000542541 RBMXL1Q96E39 390 aaKnown RBP18.45■□□□□ 0.54
HOMER3-205ENST00000542541 DUX5Q96PT3 197 aa18.45■□□□□ 0.54
HOMER3-205ENST00000542541 ESM1Q9NQ30 184 aa18.45■□□□□ 0.54
HOMER3-205ENST00000542541 MOB4Q9Y3A3 225 aa18.45■□□□□ 0.54
HOMER3-205ENST00000542541 C9orf170A2RU37 121 aa18.45■□□□□ 0.54
HOMER3-205ENST00000542541 S1PR2O95136 353 aa18.45■□□□□ 0.54
HOMER3-205ENST00000542541 CDS2O95674 445 aa18.45■□□□□ 0.54
HOMER3-205ENST00000542541 TMEM187Q14656 261 aa18.45■□□□□ 0.54
HOMER3-205ENST00000542541 VMA21Q3ZAQ7 101 aa18.45■□□□□ 0.54
HOMER3-205ENST00000542541 FBLN7Q53RD9 439 aa18.45■□□□□ 0.54
HOMER3-205ENST00000542541 LYG2Q86SG7 212 aa18.45■□□□□ 0.54
HOMER3-205ENST00000542541 RHOVQ96L33 236 aa18.45■□□□□ 0.54
HOMER3-205ENST00000542541 SETD2Q9BYW2 2564 aaPredicted RBP18.45■□□□□ 0.54
HOMER3-205ENST00000542541 SPNP16150 400 aa18.44■□□□□ 0.54
HOMER3-205ENST00000542541 F2RL1P55085 397 aa18.44■□□□□ 0.54
HOMER3-205ENST00000542541 ERVK-16P61578 105 aa18.44■□□□□ 0.54
HOMER3-205ENST00000542541 DHRS2Q13268 280 aa18.44■□□□□ 0.54
HOMER3-205ENST00000542541 ZNF695Q8IW36 515 aa18.44■□□□□ 0.54
HOMER3-205ENST00000542541 MINDY2Q8NBR6 621 aa18.44■□□□□ 0.54
HOMER3-205ENST00000542541 PLSCR3Q9NRY6 295 aa18.44■□□□□ 0.54
HOMER3-205ENST00000542541 SRRM4A7MD48 611 aaKnown RBP18.43■□□□□ 0.54
HOMER3-205ENST00000542541 FGF16O43320 207 aa18.43■□□□□ 0.54
HOMER3-205ENST00000542541 PRAF2O60831 178 aa18.43■□□□□ 0.54
HOMER3-205ENST00000542541 IL5P05113 134 aa18.43■□□□□ 0.54
HOMER3-205ENST00000542541 RNASE1P07998 156 aaKnown RBP18.43■□□□□ 0.54
HOMER3-205ENST00000542541 OXA1LQ15070 435 aa18.43■□□□□ 0.54
HOMER3-205ENST00000542541 PSG5Q15238 335 aa18.43■□□□□ 0.54
HOMER3-205ENST00000542541 LGI3Q8N145 548 aa18.43■□□□□ 0.54
HOMER3-205ENST00000542541 VSTM2AQ8TAG5 236 aa18.43■□□□□ 0.54
HOMER3-205ENST00000542541 CASTOR1Q8WTX7 329 aa18.43■□□□□ 0.54
HOMER3-205ENST00000542541 IL22RA2Q969J5 263 aa18.43■□□□□ 0.54
HOMER3-205ENST00000542541 R3HDM4Q96D70 268 aa18.43■□□□□ 0.54
HOMER3-205ENST00000542541 TMEM56Q96MV1 263 aa18.43■□□□□ 0.54
HOMER3-205ENST00000542541 GPN1Q9HCN4 374 aaPredicted RBP18.43■□□□□ 0.54
HOMER3-205ENST00000542541 TMEM56-RWDD3S4R434 201 aa18.43■□□□□ 0.54
HOMER3-205ENST00000542541 RRHO14718 337 aa18.42■□□□□ 0.54
HOMER3-205ENST00000542541 GPR137BO60478 399 aa18.42■□□□□ 0.54
HOMER3-205ENST00000542541 NDUFA3O95167 84 aa18.42■□□□□ 0.54
HOMER3-205ENST00000542541 DUS4LO95620 317 aaKnown RBP18.42■□□□□ 0.54
HOMER3-205ENST00000542541 KRASP01116 189 aa18.42■□□□□ 0.54
HOMER3-205ENST00000542541 IGLV2-23P01705 113 aa18.42■□□□□ 0.54
HOMER3-205ENST00000542541 CNTFRP26992 372 aa18.42■□□□□ 0.54
HOMER3-205ENST00000542541 UBE2KP61086 200 aa18.42■□□□□ 0.54
HOMER3-205ENST00000542541 RPL15P61313 204 aaKnown RBP18.42■□□□□ 0.54
HOMER3-205ENST00000542541 UBA52P62987 128 aaKnown RBP18.42■□□□□ 0.54
HOMER3-205ENST00000542541 POU2AF1Q16633 256 aa18.42■□□□□ 0.54
HOMER3-205ENST00000542541 TEX45Q8NA69 505 aa18.42■□□□□ 0.54
HOMER3-205ENST00000542541 DMBX1Q8NFW5 382 aa18.42■□□□□ 0.54
HOMER3-205ENST00000542541 RBPMSQ93062 196 aaKnown RBP18.42■□□□□ 0.54
HOMER3-205ENST00000542541 RASL11BQ9BPW5 248 aa18.42■□□□□ 0.54
HOMER3-205ENST00000542541 MARCH11A6NNE9 402 aa18.41■□□□□ 0.54
HOMER3-205ENST00000542541 TRIM77I1YAP6 450 aa18.41■□□□□ 0.54
HOMER3-205ENST00000542541 SLC25A17O43808 307 aa18.41■□□□□ 0.54
HOMER3-205ENST00000542541 PLGLAQ15195 96 aa18.41■□□□□ 0.54
HOMER3-205ENST00000542541 COQ8AQ8NI60 647 aa18.41■□□□□ 0.54
HOMER3-205ENST00000542541 METTL1Q9UBP6 276 aaKnown RBP18.41■□□□□ 0.54
HOMER3-205ENST00000542541 CHST1O43916 411 aa18.41■□□□□ 0.54
HOMER3-205ENST00000542541 C5orf64Q2M2E5 130 aa18.41■□□□□ 0.54
HOMER3-205ENST00000542541 TMEM268Q5VZI3 342 aa18.41■□□□□ 0.54
HOMER3-205ENST00000542541 FAM71E2Q8N5Q1 922 aa18.41■□□□□ 0.54
HOMER3-205ENST00000542541 Q8N9W7 124 aa18.41■□□□□ 0.54
HOMER3-205ENST00000542541 CHPT1Q8WUD6 406 aa18.41■□□□□ 0.54
HOMER3-205ENST00000542541 OR2A4O95047 310 aa18.4■□□□□ 0.54
HOMER3-205ENST00000542541 IGKV1-39P01597 117 aa18.4■□□□□ 0.54
HOMER3-205ENST00000542541 IGKV1D-39P04432 117 aa18.4■□□□□ 0.54
HOMER3-205ENST00000542541 SAA1P0DJI8 122 aaPredicted RBP18.4■□□□□ 0.54
HOMER3-205ENST00000542541 G6PCP35575 357 aa18.4■□□□□ 0.54
HOMER3-205ENST00000542541 AKR1C2P52895 323 aa18.4■□□□□ 0.54
HOMER3-205ENST00000542541 SSX9Q7RTT3 188 aa18.4■□□□□ 0.54
HOMER3-205ENST00000542541 SELENOHQ8IZQ5 122 aaKnown RBP18.4■□□□□ 0.54
HOMER3-205ENST00000542541 VKORC1L1Q8N0U8 176 aa18.4■□□□□ 0.54
HOMER3-205ENST00000542541 CADM3Q8N126 398 aa18.4■□□□□ 0.54
HOMER3-205ENST00000542541 C5orf56Q8N8D9 126 aa18.4■□□□□ 0.54
HOMER3-205ENST00000542541 LRTM2Q8N967 370 aa18.4■□□□□ 0.54
HOMER3-205ENST00000542541 ZNF431Q8TF32 576 aaPredicted RBP18.4■□□□□ 0.54
HOMER3-205ENST00000542541 RRNAD1Q96FB5 475 aaKnown RBP18.4■□□□□ 0.54
HOMER3-205ENST00000542541 SEC22AQ96IW7 307 aa18.4■□□□□ 0.54
HOMER3-205ENST00000542541 OR2A7Q96R45 310 aa18.4■□□□□ 0.54
HOMER3-205ENST00000542541 PHB2Q99623 299 aa18.4■□□□□ 0.54
HOMER3-205ENST00000542541 NPFFR1Q9GZQ6 430 aa18.4■□□□□ 0.54
HOMER3-205ENST00000542541 FBXL15Q9H469 300 aa18.4■□□□□ 0.54
HOMER3-205ENST00000542541 CREBL2O60519 120 aaPredicted RBP18.39■□□□□ 0.53
HOMER3-205ENST00000542541 CRYBA1P05813 215 aa18.39■□□□□ 0.53
HOMER3-205ENST00000542541 LIN54Q6MZP7 749 aa18.39■□□□□ 0.53
HOMER3-205ENST00000542541 H2BFWTQ7Z2G1 175 aa18.39■□□□□ 0.53
HOMER3-205ENST00000542541 RNASE11Q8TAA1 199 aaKnown RBP18.39■□□□□ 0.53
HOMER3-205ENST00000542541 MITD1Q8WV92 249 aa18.39■□□□□ 0.53
HOMER3-205ENST00000542541 BET1LQ9NYM9 111 aa18.39■□□□□ 0.53
HOMER3-205ENST00000542541 SIGLEC9Q9Y336 463 aa18.39■□□□□ 0.53
HOMER3-205ENST00000542541 DUXBA0A1W2PPF3 345 aa18.38■□□□□ 0.53
HOMER3-205ENST00000542541 ANKRD55Q3KP44 614 aa18.38■□□□□ 0.53
HOMER3-205ENST00000542541 OR4A47Q6IF82 309 aa18.38■□□□□ 0.53
HOMER3-205ENST00000542541 PPP1R27Q86WC6 154 aa18.38■□□□□ 0.53
HOMER3-205ENST00000542541 PUSL1Q8N0Z8 303 aaKnown RBP18.38■□□□□ 0.53
HOMER3-205ENST00000542541 OR52B4Q8NGK2 314 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms