RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 NCOR1P1Q9H4R4 102 aa1.21□□□□□ -2.22
TRAV1-1-201ENST00000542354 KAT8Q9H7Z6 458 aaKnown RBP1.21□□□□□ -2.22
TRAV1-1-201ENST00000542354 C1orf109Q9NX04 203 aa1.21□□□□□ -2.22
TRAV1-1-201ENST00000542354 NDUFAF4Q9P032 175 aa1.21□□□□□ -2.22
TRAV1-1-201ENST00000542354 CYB5R1Q9UHQ9 305 aa1.21□□□□□ -2.22
TRAV1-1-201ENST00000542354 ENOPH1Q9UHY7 261 aa1.21□□□□□ -2.22
TRAV1-1-201ENST00000542354 RABAC1Q9UI14 185 aa1.21□□□□□ -2.22
TRAV1-1-201ENST00000542354 RIMS3Q9UJD0 308 aa1.21□□□□□ -2.22
TRAV1-1-201ENST00000542354 SLC7A7Q9UM01 511 aa1.21□□□□□ -2.22
TRAV1-1-201ENST00000542354 A0A087WUV0 522 aaPredicted RBP1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 IGHV7-4-1A0A0J9YVY3 117 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 A0A1W2PQL4 384 aaPredicted RBP1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 PRR32B1ATL7 298 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 H3BMM0 161 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 H7C2Y5 167 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 NDUFA4O00483 81 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 ATP8B1O43520 1251 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 ZNF207O43670 478 aaKnown RBP1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 ZNF780AO75290 641 aaPredicted RBP1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 LYPLA1O75608 230 aaPredicted RBP1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 OR7A10O76100 309 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 CPSF4O95639 269 aaKnown RBP1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 FADS2O95864 444 aaKnown RBP1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 MT2AP02795 61 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 EIF4EP06730 217 aaKnown RBP1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 RPS17P08708 135 aaKnown RBP1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 RBP1P09455 135 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 ZNF688P0C7X2 276 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 CRABP1P29762 137 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 TSPOP30536 169 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 GPR183P32249 361 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 PKNOX1P55347 436 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 RGS8P57771 180 aaPredicted RBP1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 B2MP61769 119 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 MRPS15P82914 257 aaKnown RBP1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 FRG1Q14331 258 aaKnown RBP1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 LAGE3Q14657 143 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 MEF2DQ14814 521 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 ZNF146Q15072 292 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 MRPL23Q16540 153 aaKnown RBP1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 PRSS8Q16651 343 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 RTL8BQ17RB0 113 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 CT45A1Q5HYN5 189 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 LINC01556Q5JQF7 62 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 ZNF684Q5T5D7 378 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 DNM1P34Q6PK57 102 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 DHFR2Q86XF0 187 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 Q8IYB0 196 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 CLECL1Q8IZS7 167 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 TTC9CQ8N5M4 171 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 UBL4BQ8N7F7 174 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 STPG4Q8N801 248 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 AQP11Q8NBQ7 271 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 OR4A15Q8NGL6 344 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 OR10K1Q8NGX5 313 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 CT45A3Q8NHU0 189 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 FAM81AQ8TBF8 368 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 IFT81Q8WYA0 676 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 BSCL2Q96G97 398 aaPredicted RBP1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 COQ2Q96H96 371 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 ST6GAL2Q96JF0 529 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 CXorf58Q96LI9 332 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 Q96MT0 163 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 DESI2Q9BSY9 194 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 CCDC28BQ9BUN5 200 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 MRPL20Q9BYC9 149 aaKnown RBP1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 PKIBQ9C010 78 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 TSPYL1Q9H0U9 437 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 SYT4Q9H2B2 425 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 MOB1AQ9H8S9 216 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 MED20Q9H944 212 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 BCL2L10Q9HD36 194 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 EXOSC4Q9NPD3 245 aaKnown RBP1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 INTS9Q9NV88 658 aaKnown RBP1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 GHRLQ9UBU3 117 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 ING4Q9UNL4 249 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 TMED5Q9Y3A6 229 aa1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 TIMM8BQ9Y5J9 83 aaPredicted RBP1.2□□□□□ -2.22
TRAV1-1-201ENST00000542354 IGLV8-61A0A075B6I0 122 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 IGLV5-45A0A087WSX0 123 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 IGHV3-49A0A0A0MS15 119 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 TRAV14DV4A0A0A6YYC5 116 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 OR5H14A6NHG9 310 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 ZNF98A6NK75 572 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 ZNF705GA8MUZ8 300 aaPredicted RBP1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 K7EQG2 157 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 SLC33A1O00400 549 aaPredicted RBP1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 SLC17A2O00624 439 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 DNALI1O14645 258 aaPredicted RBP1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 SLC31A2O15432 143 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 ST8SIA3O43173 380 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 KLHL2O95198 593 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 OR2H2O95918 312 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 DHFRP00374 187 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 NRASP01111 189 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 MT-ND1P03886 318 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 ISG15P05161 165 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 SSTR5P35346 364 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 PRKAA2P54646 552 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 PLTPP55058 493 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms