RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 SPIN2BQ9BPZ2 258 aa11.64□□□□□ -0.55
RTN3-211ENST00000542238 TECRQ9NZ01 308 aaKnown RBP11.64□□□□□ -0.55
RTN3-211ENST00000542238 TRBV6-7A0A0A0MS04 114 aa11.63□□□□□ -0.55
RTN3-211ENST00000542238 TRBV9A0A0B4J1U6 114 aa11.63□□□□□ -0.55
RTN3-211ENST00000542238 DIRAS3O95661 229 aa11.63□□□□□ -0.55
RTN3-211ENST00000542238 CRYZL1O95825 349 aa11.63□□□□□ -0.55
RTN3-211ENST00000542238 PRH1P02810 166 aa11.63□□□□□ -0.55
RTN3-211ENST00000542238 CDK1P06493 297 aa11.63□□□□□ -0.55
RTN3-211ENST00000542238 FOLR2P14207 255 aa11.63□□□□□ -0.55
RTN3-211ENST00000542238 KIR2DS2P43631 304 aa11.63□□□□□ -0.55
RTN3-211ENST00000542238 MED22Q15528 200 aa11.63□□□□□ -0.55
RTN3-211ENST00000542238 PLAC9Q5JTB6 97 aa11.63□□□□□ -0.55
RTN3-211ENST00000542238 IDO2Q6ZQW0 420 aa11.63□□□□□ -0.55
RTN3-211ENST00000542238 SLC16A13Q7RTY0 426 aa11.63□□□□□ -0.55
RTN3-211ENST00000542238 OSR1Q8TAX0 266 aaPredicted RBP11.63□□□□□ -0.55
RTN3-211ENST00000542238 UFD1Q92890 307 aa11.63□□□□□ -0.55
RTN3-211ENST00000542238 TMEM203Q969S6 136 aa11.63□□□□□ -0.55
RTN3-211ENST00000542238 GINS4Q9BRT9 223 aa11.63□□□□□ -0.55
RTN3-211ENST00000542238 CABLES2Q9BTV7 478 aa11.63□□□□□ -0.55
RTN3-211ENST00000542238 WFDC10AQ9H1F0 79 aa11.63□□□□□ -0.55
RTN3-211ENST00000542238 AK6Q9Y3D8 172 aaKnown RBP11.63□□□□□ -0.55
RTN3-211ENST00000542238 C2orf70A6NJV1 201 aa11.62□□□□□ -0.55
RTN3-211ENST00000542238 PTGES3LE9PB15 166 aa11.62□□□□□ -0.55
RTN3-211ENST00000542238 ARL6IP5O75915 188 aa11.62□□□□□ -0.55
RTN3-211ENST00000542238 FCGR3AP08637 254 aa11.62□□□□□ -0.55
RTN3-211ENST00000542238 GSTT2P0CG29 244 aa11.62□□□□□ -0.55
RTN3-211ENST00000542238 GSTT2BP0CG30 244 aa11.62□□□□□ -0.55
RTN3-211ENST00000542238 ZNF45Q02386 682 aa11.62□□□□□ -0.55
RTN3-211ENST00000542238 C15orf32Q32M92 178 aa11.62□□□□□ -0.55
RTN3-211ENST00000542238 C2orf76Q3KRA6 126 aa11.62□□□□□ -0.55
RTN3-211ENST00000542238 LIPKQ5VXJ0 399 aa11.62□□□□□ -0.55
RTN3-211ENST00000542238 PRSS48Q7RTY5 328 aa11.62□□□□□ -0.55
RTN3-211ENST00000542238 SLC25A42Q86VD7 318 aa11.62□□□□□ -0.55
RTN3-211ENST00000542238 TTC9CQ8N5M4 171 aa11.62□□□□□ -0.55
RTN3-211ENST00000542238 FAM3DQ96BQ1 224 aa11.62□□□□□ -0.55
RTN3-211ENST00000542238 RAB3CQ96E17 227 aa11.62□□□□□ -0.55
RTN3-211ENST00000542238 GFI1Q99684 422 aa11.62□□□□□ -0.55
RTN3-211ENST00000542238 CENPOQ9BU64 300 aa11.62□□□□□ -0.55
RTN3-211ENST00000542238 ZNF430Q9H8G1 570 aaPredicted RBP11.62□□□□□ -0.55
RTN3-211ENST00000542238 ZC4H2Q9NQZ6 224 aa11.62□□□□□ -0.55
RTN3-211ENST00000542238 PPP5D1E7EU14 171 aa11.61□□□□□ -0.55
RTN3-211ENST00000542238 GGCTO75223 188 aaKnown RBP11.61□□□□□ -0.55
RTN3-211ENST00000542238 DUTP33316 252 aaKnown RBP11.61□□□□□ -0.55
RTN3-211ENST00000542238 MAP2K4P45985 399 aa11.61□□□□□ -0.55
RTN3-211ENST00000542238 CLDN12P56749 244 aa11.61□□□□□ -0.55
RTN3-211ENST00000542238 IRF3Q14653 427 aa11.61□□□□□ -0.55
RTN3-211ENST00000542238 TRAM1Q15629 374 aa11.61□□□□□ -0.55
RTN3-211ENST00000542238 GPR141Q7Z602 305 aa11.61□□□□□ -0.55
RTN3-211ENST00000542238 MMD2Q8IY49 270 aa11.61□□□□□ -0.55
RTN3-211ENST00000542238 LINC00476Q8WZB0 136 aa11.61□□□□□ -0.55
RTN3-211ENST00000542238 DDB2Q92466 427 aa11.61□□□□□ -0.55
RTN3-211ENST00000542238 WDR89Q96FK6 387 aaPredicted RBP11.61□□□□□ -0.55
RTN3-211ENST00000542238 C5orf30Q96GV9 206 aa11.61□□□□□ -0.55
RTN3-211ENST00000542238 DCUN1D5Q9BTE7 237 aa11.61□□□□□ -0.55
RTN3-211ENST00000542238 RAB22AQ9UL26 194 aa11.61□□□□□ -0.55
RTN3-211ENST00000542238 LSM2Q9Y333 95 aaKnown RBP11.61□□□□□ -0.55
RTN3-211ENST00000542238 LGALS9O00182 355 aa11.6□□□□□ -0.55
RTN3-211ENST00000542238 OR2J3O76001 311 aa11.6□□□□□ -0.55
RTN3-211ENST00000542238 LY6G6CO95867 125 aa11.6□□□□□ -0.55
RTN3-211ENST00000542238 GADD45AP24522 165 aa11.6□□□□□ -0.55
RTN3-211ENST00000542238 PSMD7P51665 324 aa11.6□□□□□ -0.55
RTN3-211ENST00000542238 CDK10Q15131 360 aa11.6□□□□□ -0.55
RTN3-211ENST00000542238 CROCCP3Q8IVE0 287 aa11.6□□□□□ -0.55
RTN3-211ENST00000542238 PPP1R14BQ96C90 147 aa11.6□□□□□ -0.55
RTN3-211ENST00000542238 ZNF257Q9Y2Q1 563 aa11.6□□□□□ -0.55
RTN3-211ENST00000542238 LINC00473A8K010 186 aa11.59□□□□□ -0.55
RTN3-211ENST00000542238 RGS10O43665 173 aa11.59□□□□□ -0.55
RTN3-211ENST00000542238 OR2C1O95371 312 aa11.59□□□□□ -0.55
RTN3-211ENST00000542238 HLA-AP01891 365 aaKnown RBP11.59□□□□□ -0.55
RTN3-211ENST00000542238 HSMCR30P0CW71 290 aa11.59□□□□□ -0.55
RTN3-211ENST00000542238 SAA1P0DJI8 122 aaPredicted RBP11.59□□□□□ -0.55
RTN3-211ENST00000542238 PSMA1P25786 263 aaKnown RBP11.59□□□□□ -0.55
RTN3-211ENST00000542238 TALDO1P37837 337 aa11.59□□□□□ -0.55
RTN3-211ENST00000542238 TBCEQ15813 527 aaPredicted RBP11.59□□□□□ -0.55
RTN3-211ENST00000542238 ANKRD55Q3KP44 614 aa11.59□□□□□ -0.55
RTN3-211ENST00000542238 ZNF57Q68EA5 555 aaPredicted RBP11.59□□□□□ -0.55
RTN3-211ENST00000542238 TMEM91Q6ZNR0 172 aa11.59□□□□□ -0.55
RTN3-211ENST00000542238 GPHB5Q86YW7 130 aa11.59□□□□□ -0.55
RTN3-211ENST00000542238 OR52B4Q8NGK2 314 aa11.59□□□□□ -0.55
RTN3-211ENST00000542238 MAFIPQ8WZ33 124 aa11.59□□□□□ -0.55
RTN3-211ENST00000542238 GGTLC1Q9BX51 225 aa11.59□□□□□ -0.55
RTN3-211ENST00000542238 FBXL7Q9UJT9 491 aa11.59□□□□□ -0.55
RTN3-211ENST00000542238 KCNK7Q9Y2U2 307 aa11.59□□□□□ -0.55
RTN3-211ENST00000542238 PRELID3BQ9Y3B1 194 aa11.59□□□□□ -0.55
RTN3-211ENST00000542238 V9GY05 133 aa11.59□□□□□ -0.55
RTN3-211ENST00000542238 A0A075B6Q4 140 aa11.58□□□□□ -0.56
RTN3-211ENST00000542238 LOC102724200A0A096LPH7 203 aaPredicted RBP11.58□□□□□ -0.56
RTN3-211ENST00000542238 TMEM272A0A1B0GTI8 110 aa11.58□□□□□ -0.56
RTN3-211ENST00000542238 CXorf65A6NEN9 183 aa11.58□□□□□ -0.56
RTN3-211ENST00000542238 EDN2P20800 178 aa11.58□□□□□ -0.56
RTN3-211ENST00000542238 CBLN1P23435 193 aa11.58□□□□□ -0.56
RTN3-211ENST00000542238 ARL3P36405 182 aa11.58□□□□□ -0.56
RTN3-211ENST00000542238 RPS25P62851 125 aaKnown RBP11.58□□□□□ -0.56
RTN3-211ENST00000542238 FAM106AQ4KMX7 169 aa11.58□□□□□ -0.56
RTN3-211ENST00000542238 H1FOOQ8IZA3 346 aaPredicted RBP11.58□□□□□ -0.56
RTN3-211ENST00000542238 OR10R2Q8NGX6 335 aa11.58□□□□□ -0.56
RTN3-211ENST00000542238 ST6GALNAC5Q9BVH7 336 aa11.58□□□□□ -0.56
RTN3-211ENST00000542238 MRPS7Q9Y2R9 242 aaKnown RBP11.58□□□□□ -0.56
RTN3-211ENST00000542238 DMRT1Q9Y5R6 373 aa11.58□□□□□ -0.56
RTN3-211ENST00000542238 ZNF320A2RRD8 509 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 417.3 ms