RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 OR2K2Q8NGT1 345 aa11.61□□□□□ -0.55
CLSTN3-213ENST00000541953 OR10J5Q8NHC4 309 aa11.61□□□□□ -0.55
CLSTN3-213ENST00000541953 ZC4H2Q9NQZ6 224 aa11.61□□□□□ -0.55
CLSTN3-213ENST00000541953 C8orf4Q9NR00 106 aa11.61□□□□□ -0.55
CLSTN3-213ENST00000541953 PEMTQ9UBM1 199 aa11.61□□□□□ -0.55
CLSTN3-213ENST00000541953 FAM223BA6NKX1 122 aa11.6□□□□□ -0.55
CLSTN3-213ENST00000541953 TEX22C9J3V5 150 aa11.6□□□□□ -0.55
CLSTN3-213ENST00000541953 RAB27BO00194 218 aa11.6□□□□□ -0.55
CLSTN3-213ENST00000541953 CASQ2O14958 399 aaPredicted RBP11.6□□□□□ -0.55
CLSTN3-213ENST00000541953 MPPED1O15442 326 aa11.6□□□□□ -0.55
CLSTN3-213ENST00000541953 OR2C1O95371 312 aa11.6□□□□□ -0.55
CLSTN3-213ENST00000541953 HSMCR30P0CW71 290 aa11.6□□□□□ -0.55
CLSTN3-213ENST00000541953 FOLR2P14207 255 aa11.6□□□□□ -0.55
CLSTN3-213ENST00000541953 ATP5G2Q06055 141 aa11.6□□□□□ -0.55
CLSTN3-213ENST00000541953 GUCA2BQ16661 112 aa11.6□□□□□ -0.55
CLSTN3-213ENST00000541953 TATDN3Q17R31 274 aa11.6□□□□□ -0.55
CLSTN3-213ENST00000541953 C15orf32Q32M92 178 aa11.6□□□□□ -0.55
CLSTN3-213ENST00000541953 VMA21Q3ZAQ7 101 aa11.6□□□□□ -0.55
CLSTN3-213ENST00000541953 FAM223AQ8IWN6 122 aa11.6□□□□□ -0.55
CLSTN3-213ENST00000541953 H1FOOQ8IZA3 346 aaPredicted RBP11.6□□□□□ -0.55
CLSTN3-213ENST00000541953 RAB3CQ96E17 227 aa11.6□□□□□ -0.55
CLSTN3-213ENST00000541953 CCDC140Q96MF4 163 aa11.6□□□□□ -0.55
CLSTN3-213ENST00000541953 IGLV2-14P01704 120 aa11.59□□□□□ -0.55
CLSTN3-213ENST00000541953 MYOD1P15172 320 aa11.59□□□□□ -0.55
CLSTN3-213ENST00000541953 KIR2DS2P43631 304 aa11.59□□□□□ -0.55
CLSTN3-213ENST00000541953 MAP2K4P45985 399 aa11.59□□□□□ -0.55
CLSTN3-213ENST00000541953 LAX1Q8IWV1 398 aa11.59□□□□□ -0.55
CLSTN3-213ENST00000541953 TTC9CQ8N5M4 171 aa11.59□□□□□ -0.55
CLSTN3-213ENST00000541953 DYNLRB2Q8TF09 96 aa11.59□□□□□ -0.55
CLSTN3-213ENST00000541953 LINC00476Q8WZB0 136 aa11.59□□□□□ -0.55
CLSTN3-213ENST00000541953 SLC2A8Q9NY64 477 aa11.59□□□□□ -0.55
CLSTN3-213ENST00000541953 DNAH6Q9C0G6 4158 aa11.58□□□□□ -0.56
CLSTN3-213ENST00000541953 IGKV1D-13A0A0B4J2D9 117 aa11.58□□□□□ -0.56
CLSTN3-213ENST00000541953 TMEM213A2RRL7 107 aa11.58□□□□□ -0.56
CLSTN3-213ENST00000541953 AIREO43918 545 aa11.58□□□□□ -0.56
CLSTN3-213ENST00000541953 IL6RP08887 468 aaPredicted RBP11.58□□□□□ -0.56
CLSTN3-213ENST00000541953 IGKV1-13P0DP09 117 aa11.58□□□□□ -0.56
CLSTN3-213ENST00000541953 HIST1H1DP16402 221 aaKnown RBP11.58□□□□□ -0.56
CLSTN3-213ENST00000541953 BRWD1-AS2P59051 145 aa11.58□□□□□ -0.56
CLSTN3-213ENST00000541953 TMEM61Q8N0U2 210 aa11.58□□□□□ -0.56
CLSTN3-213ENST00000541953 OR10R2Q8NGX6 335 aa11.58□□□□□ -0.56
CLSTN3-213ENST00000541953 FANCD2OSQ96PS1 177 aa11.58□□□□□ -0.56
CLSTN3-213ENST00000541953 GPHA2Q96T91 129 aa11.58□□□□□ -0.56
CLSTN3-213ENST00000541953 OVOL2Q9BRP0 275 aa11.58□□□□□ -0.56
CLSTN3-213ENST00000541953 MLXQ9UH92 298 aa11.58□□□□□ -0.56
CLSTN3-213ENST00000541953 RAB22AQ9UL26 194 aa11.58□□□□□ -0.56
CLSTN3-213ENST00000541953 RBM7Q9Y580 266 aaKnown RBP11.58□□□□□ -0.56
CLSTN3-213ENST00000541953 V9GY05 133 aa11.58□□□□□ -0.56
CLSTN3-213ENST00000541953 EBAG9O00559 213 aa11.57□□□□□ -0.56
CLSTN3-213ENST00000541953 FCGR3BO75015 233 aa11.57□□□□□ -0.56
CLSTN3-213ENST00000541953 NDUFB8O95169 186 aa11.57□□□□□ -0.56
CLSTN3-213ENST00000541953 RRASP10301 218 aa11.57□□□□□ -0.56
CLSTN3-213ENST00000541953 CBX3Q13185 183 aa11.57□□□□□ -0.56
CLSTN3-213ENST00000541953 CDK10Q15131 360 aa11.57□□□□□ -0.56
CLSTN3-213ENST00000541953 NR2C2APQ86WQ0 139 aa11.57□□□□□ -0.56
CLSTN3-213ENST00000541953 NECAP1Q8NC96 275 aa11.57□□□□□ -0.56
CLSTN3-213ENST00000541953 OSR1Q8TAX0 266 aaPredicted RBP11.57□□□□□ -0.56
CLSTN3-213ENST00000541953 GINS4Q9BRT9 223 aa11.57□□□□□ -0.56
CLSTN3-213ENST00000541953 TUSC2O75896 110 aa11.56□□□□□ -0.56
CLSTN3-213ENST00000541953 ARL6IP5O75915 188 aa11.56□□□□□ -0.56
CLSTN3-213ENST00000541953 DIRAS3O95661 229 aa11.56□□□□□ -0.56
CLSTN3-213ENST00000541953 AREGP15514 252 aa11.56□□□□□ -0.56
CLSTN3-213ENST00000541953 NFYAP23511 347 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-213ENST00000541953 MLLT11Q13015 90 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-213ENST00000541953 EIF4EBP1Q13541 118 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-213ENST00000541953 PMS2P11Q13670 270 aa11.56□□□□□ -0.56
CLSTN3-213ENST00000541953 SSX1Q16384 188 aa11.56□□□□□ -0.56
CLSTN3-213ENST00000541953 DUSP21Q9H596 190 aa11.56□□□□□ -0.56
CLSTN3-213ENST00000541953 SMIM30A4D0T7 59 aa11.55□□□□□ -0.56
CLSTN3-213ENST00000541953 CGB1A6NKQ9 187 aa11.55□□□□□ -0.56
CLSTN3-213ENST00000541953 CBLN1P23435 193 aa11.55□□□□□ -0.56
CLSTN3-213ENST00000541953 AQP4P55087 323 aa11.55□□□□□ -0.56
CLSTN3-213ENST00000541953 MRPS15P82914 257 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-213ENST00000541953 CLEC19AQ6UXS0 136 aa11.55□□□□□ -0.56
CLSTN3-213ENST00000541953 UNQ9165/PRO28630Q6UXU0 137 aa11.55□□□□□ -0.56
CLSTN3-213ENST00000541953 KCTD9Q7L273 389 aa11.55□□□□□ -0.56
CLSTN3-213ENST00000541953 MMD2Q8IY49 270 aa11.55□□□□□ -0.56
CLSTN3-213ENST00000541953 IL17DQ8TAD2 202 aa11.55□□□□□ -0.56
CLSTN3-213ENST00000541953 NRG4Q8WWG1 115 aa11.55□□□□□ -0.56
CLSTN3-213ENST00000541953 KCTD12Q96CX2 325 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-213ENST00000541953 ADTRPQ96IZ2 230 aa11.55□□□□□ -0.56
CLSTN3-213ENST00000541953 SPIN2AQ99865 258 aa11.55□□□□□ -0.56
CLSTN3-213ENST00000541953 SPIN2BQ9BPZ2 258 aa11.55□□□□□ -0.56
CLSTN3-213ENST00000541953 FBXL7Q9UJT9 491 aa11.55□□□□□ -0.56
CLSTN3-213ENST00000541953 MFSD2BA6NFX1 497 aa11.54□□□□□ -0.56
CLSTN3-213ENST00000541953 IFITM5A6NNB3 132 aa11.54□□□□□ -0.56
CLSTN3-213ENST00000541953 ANKRD65E5RJM6 399 aa11.54□□□□□ -0.56
CLSTN3-213ENST00000541953 LGALS9O00182 355 aa11.54□□□□□ -0.56
CLSTN3-213ENST00000541953 GGCTO75223 188 aaKnown RBP11.54□□□□□ -0.56
CLSTN3-213ENST00000541953 SCAF4O95104 1147 aaKnown RBP11.54□□□□□ -0.56
CLSTN3-213ENST00000541953 REG1AP05451 166 aa11.54□□□□□ -0.56
CLSTN3-213ENST00000541953 BTNL8Q6UX41 500 aa11.54□□□□□ -0.56
CLSTN3-213ENST00000541953 Q6ZS49 121 aa11.54□□□□□ -0.56
CLSTN3-213ENST00000541953 ZNF645Q8N7E2 425 aa11.54□□□□□ -0.56
CLSTN3-213ENST00000541953 FYTTD1Q96QD9 318 aaKnown RBP11.54□□□□□ -0.56
CLSTN3-213ENST00000541953 MGLLQ99685 303 aa11.54□□□□□ -0.56
CLSTN3-213ENST00000541953 DCUN1D5Q9BTE7 237 aa11.54□□□□□ -0.56
CLSTN3-213ENST00000541953 SCN3BQ9NY72 215 aa11.54□□□□□ -0.56
CLSTN3-213ENST00000541953 ZNF257Q9Y2Q1 563 aa11.54□□□□□ -0.56
CLSTN3-213ENST00000541953 RBMX2Q9Y388 322 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms