RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 RAB7AP51149 207 aa12.27□□□□□ -0.45
GCFC2-211ENST00000541687 GABRA6Q16445 453 aa12.27□□□□□ -0.45
GCFC2-211ENST00000541687 ZBTB34Q8NCN2 500 aa12.27□□□□□ -0.45
GCFC2-211ENST00000541687 STARD4Q96DR4 205 aa12.27□□□□□ -0.45
GCFC2-211ENST00000541687 SLC45A2Q9UMX9 530 aa12.27□□□□□ -0.45
GCFC2-211ENST00000541687 CACNA1AO00555 2505 aa12.27□□□□□ -0.45
GCFC2-211ENST00000541687 NDUFB3O43676 98 aa12.27□□□□□ -0.45
GCFC2-211ENST00000541687 CFPP27918 469 aa12.27□□□□□ -0.45
GCFC2-211ENST00000541687 OTX1P32242 354 aaPredicted RBP12.27□□□□□ -0.45
GCFC2-211ENST00000541687 SH2D2AQ9NP31 389 aa12.27□□□□□ -0.45
GCFC2-211ENST00000541687 ODAMA1E959 279 aa12.26□□□□□ -0.45
GCFC2-211ENST00000541687 TRGC1P0CF51 173 aa12.26□□□□□ -0.45
GCFC2-211ENST00000541687 IER3P46695 156 aa12.26□□□□□ -0.45
GCFC2-211ENST00000541687 UBE2L3P68036 154 aaKnown RBP12.26□□□□□ -0.45
GCFC2-211ENST00000541687 RTP5Q14D33 572 aa12.26□□□□□ -0.45
GCFC2-211ENST00000541687 SGMS2Q8NHU3 365 aa12.26□□□□□ -0.45
GCFC2-211ENST00000541687 SMPD2O60906 423 aa12.26□□□□□ -0.45
GCFC2-211ENST00000541687 NTF4P34130 210 aa12.26□□□□□ -0.45
GCFC2-211ENST00000541687 RSPO1Q2MKA7 263 aaPredicted RBP12.26□□□□□ -0.45
GCFC2-211ENST00000541687 TMEM56Q96MV1 263 aa12.26□□□□□ -0.45
GCFC2-211ENST00000541687 TMEM56-RWDD3S4R434 201 aa12.26□□□□□ -0.45
GCFC2-211ENST00000541687 FAM87AP0C7U9 286 aa12.26□□□□□ -0.45
GCFC2-211ENST00000541687 FAM216AQ8WUB2 273 aa12.26□□□□□ -0.45
GCFC2-211ENST00000541687 IGHV3-21A0A0B4J1V1 117 aa12.25□□□□□ -0.45
GCFC2-211ENST00000541687 CD5P06127 495 aa12.25□□□□□ -0.45
GCFC2-211ENST00000541687 TCTAP57738 103 aa12.25□□□□□ -0.45
GCFC2-211ENST00000541687 SRSF4Q08170 494 aaKnown RBP12.25□□□□□ -0.45
GCFC2-211ENST00000541687 TMEM108Q6UXF1 575 aa12.25□□□□□ -0.45
GCFC2-211ENST00000541687 OR4D5Q8NGN0 318 aa12.25□□□□□ -0.45
GCFC2-211ENST00000541687 WDR61Q9GZS3 305 aaKnown RBP12.25□□□□□ -0.45
GCFC2-211ENST00000541687 NUP210Q8TEM1 1887 aaPredicted RBP12.25□□□□□ -0.45
GCFC2-211ENST00000541687 A0A1W2PRD5 423 aa12.25□□□□□ -0.45
GCFC2-211ENST00000541687 A0A1W2PRF3 423 aa12.25□□□□□ -0.45
GCFC2-211ENST00000541687 A0A1W2PRM7 423 aa12.25□□□□□ -0.45
GCFC2-211ENST00000541687 hADV38S2A0JD32 116 aa12.25□□□□□ -0.45
GCFC2-211ENST00000541687 FBLL1A6NHQ2 334 aaKnown RBP12.25□□□□□ -0.45
GCFC2-211ENST00000541687 FAM157AC9JC47 383 aa12.25□□□□□ -0.45
GCFC2-211ENST00000541687 COX7A1P24310 79 aa12.25□□□□□ -0.45
GCFC2-211ENST00000541687 Q1RN00 199 aa12.25□□□□□ -0.45
GCFC2-211ENST00000541687 RPL39P5Q59GN2 51 aa12.25□□□□□ -0.45
GCFC2-211ENST00000541687 TIMD4Q96H15 378 aa12.25□□□□□ -0.45
GCFC2-211ENST00000541687 RNF7Q9UBF6 113 aa12.25□□□□□ -0.45
GCFC2-211ENST00000541687 PXMP4Q9Y6I8 212 aa12.25□□□□□ -0.45
GCFC2-211ENST00000541687 SNURFLB1AK76 121 aa12.25□□□□□ -0.45
GCFC2-211ENST00000541687 RAMP3O60896 148 aa12.25□□□□□ -0.45
GCFC2-211ENST00000541687 IGHV3-48P01763 117 aa12.25□□□□□ -0.45
GCFC2-211ENST00000541687 WNT5AP41221 380 aa12.25□□□□□ -0.45
GCFC2-211ENST00000541687 PARLQ9H300 379 aa12.25□□□□□ -0.45
GCFC2-211ENST00000541687 VSIRQ9H7M9 311 aa12.25□□□□□ -0.45
GCFC2-211ENST00000541687 NCOA6Q14686 2063 aaPredicted RBP12.25□□□□□ -0.45
GCFC2-211ENST00000541687 ELOA3CA0A087WX78 387 aaPredicted RBP12.25□□□□□ -0.45
GCFC2-211ENST00000541687 COLCA2A8K830 154 aa12.25□□□□□ -0.45
GCFC2-211ENST00000541687 J3QR06 171 aa12.25□□□□□ -0.45
GCFC2-211ENST00000541687 K7N7A8 449 aa12.25□□□□□ -0.45
GCFC2-211ENST00000541687 CRYABP02511 175 aaKnown RBP12.25□□□□□ -0.45
GCFC2-211ENST00000541687 FTH1P19P0C7X4 201 aa12.25□□□□□ -0.45
GCFC2-211ENST00000541687 SCGB1C2P0DMR2 95 aa12.25□□□□□ -0.45
GCFC2-211ENST00000541687 GNB2P62879 340 aa12.25□□□□□ -0.45
GCFC2-211ENST00000541687 HLA-DRB5Q30154 266 aa12.25□□□□□ -0.45
GCFC2-211ENST00000541687 LRRC10Q5BKY1 277 aa12.25□□□□□ -0.45
GCFC2-211ENST00000541687 OR5AU1Q8NGC0 362 aa12.25□□□□□ -0.45
GCFC2-211ENST00000541687 OR13A1Q8NGR1 328 aa12.25□□□□□ -0.45
GCFC2-211ENST00000541687 TMEM171Q8WVE6 324 aa12.25□□□□□ -0.45
GCFC2-211ENST00000541687 NCBP2LA6PVI3 153 aaKnown RBP12.24□□□□□ -0.45
GCFC2-211ENST00000541687 M0R2Z0 102 aa12.24□□□□□ -0.45
GCFC2-211ENST00000541687 MGST3O14880 152 aa12.24□□□□□ -0.45
GCFC2-211ENST00000541687 B3GALT5-AS1P59052 145 aa12.24□□□□□ -0.45
GCFC2-211ENST00000541687 MST1LQ2TV78 715 aa12.24□□□□□ -0.45
GCFC2-211ENST00000541687 TBX15Q96SF7 602 aa12.24□□□□□ -0.45
GCFC2-211ENST00000541687 PITPNC1Q9UKF7 332 aa12.24□□□□□ -0.45
GCFC2-211ENST00000541687 FREM1Q5H8C1 2179 aa12.24□□□□□ -0.45
GCFC2-211ENST00000541687 IGHV1-2P23083 117 aa12.24□□□□□ -0.45
GCFC2-211ENST00000541687 HOXA6P31267 233 aa12.24□□□□□ -0.45
GCFC2-211ENST00000541687 ID3Q02535 119 aa12.24□□□□□ -0.45
GCFC2-211ENST00000541687 TFF3Q07654 80 aa12.24□□□□□ -0.45
GCFC2-211ENST00000541687 Q8WTZ3 238 aa12.24□□□□□ -0.45
GCFC2-211ENST00000541687 LSM10Q969L4 123 aaKnown RBP12.24□□□□□ -0.45
GCFC2-211ENST00000541687 HARBI1Q96MB7 349 aa12.24□□□□□ -0.45
GCFC2-211ENST00000541687 CLEC5AQ9NY25 188 aa12.24□□□□□ -0.45
GCFC2-211ENST00000541687 LY6G6EA0A0G2JKS1 128 aa12.24□□□□□ -0.45
GCFC2-211ENST00000541687 ZNF785A8K8V0 405 aa12.24□□□□□ -0.45
GCFC2-211ENST00000541687 HPRT1P00492 218 aa12.24□□□□□ -0.45
GCFC2-211ENST00000541687 CECR9P0C854 216 aa12.24□□□□□ -0.45
GCFC2-211ENST00000541687 FOXC1Q12948 553 aa12.24□□□□□ -0.45
GCFC2-211ENST00000541687 ZNF506Q5JVG8 444 aa12.24□□□□□ -0.45
GCFC2-211ENST00000541687 QTRT1Q9BXR0 403 aaKnown RBP12.24□□□□□ -0.45
GCFC2-211ENST00000541687 U3KQA8 63 aa12.24□□□□□ -0.45
GCFC2-211ENST00000541687 TEX50A0A1B0GTY4 177 aa12.23□□□□□ -0.45
GCFC2-211ENST00000541687 RPEL1Q2QD12 228 aa12.23□□□□□ -0.45
GCFC2-211ENST00000541687 VMA21Q3ZAQ7 101 aa12.23□□□□□ -0.45
GCFC2-211ENST00000541687 TEPPQ6URK8 271 aa12.23□□□□□ -0.45
GCFC2-211ENST00000541687 PROK2Q9HC23 129 aa12.23□□□□□ -0.45
GCFC2-211ENST00000541687 GFRA1P56159 465 aa12.23□□□□□ -0.45
GCFC2-211ENST00000541687 IGHV3-72A0A0B4J1Y9 119 aa12.23□□□□□ -0.45
GCFC2-211ENST00000541687 COTL1Q14019 142 aa12.23□□□□□ -0.45
GCFC2-211ENST00000541687 OR2D3Q8NGH3 330 aa12.23□□□□□ -0.45
GCFC2-211ENST00000541687 RNF24Q9Y225 148 aa12.23□□□□□ -0.45
GCFC2-211ENST00000541687 PRR33A8MZF0 331 aa12.23□□□□□ -0.45
GCFC2-211ENST00000541687 CLDND2Q8NHS1 167 aa12.23□□□□□ -0.45
GCFC2-211ENST00000541687 SAP30LQ9HAJ7 183 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms