RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 OR4S2Q8NH73 311 aa22.5■■□□□ 1.19
CCM2-218ENST00000541586 KCNAB3O43448 404 aa22.49■■□□□ 1.19
CCM2-218ENST00000541586 RLN2P04090 185 aa22.49■■□□□ 1.19
CCM2-218ENST00000541586 IL3RAP26951 378 aa22.49■■□□□ 1.19
CCM2-218ENST00000541586 NKX2-1P43699 371 aaPredicted RBP22.49■■□□□ 1.19
CCM2-218ENST00000541586 IL17RELQ6ZVW7 336 aa22.49■■□□□ 1.19
CCM2-218ENST00000541586 OR13D1Q8NGV5 346 aa22.49■■□□□ 1.19
CCM2-218ENST00000541586 R3HDM4Q96D70 268 aa22.49■■□□□ 1.19
CCM2-218ENST00000541586 ZFP57Q9NU63 452 aa22.49■■□□□ 1.19
CCM2-218ENST00000541586 POMT1Q9Y6A1 747 aa22.49■■□□□ 1.19
CCM2-218ENST00000541586 MARCH11A6NNE9 402 aa22.48■■□□□ 1.19
CCM2-218ENST00000541586 AP2S1P53680 142 aaPredicted RBP22.48■■□□□ 1.19
CCM2-218ENST00000541586 TBX15Q96SF7 602 aa22.48■■□□□ 1.19
CCM2-218ENST00000541586 IGHV3OR16-10A0A075B7F0 116 aa22.48■■□□□ 1.19
CCM2-218ENST00000541586 RNF222A6NCQ9 220 aa22.48■■□□□ 1.19
CCM2-218ENST00000541586 CRYZL1O95825 349 aa22.48■■□□□ 1.19
CCM2-218ENST00000541586 IFITM2Q01629 132 aa22.48■■□□□ 1.19
CCM2-218ENST00000541586 FAM120AOSQ5T036 256 aa22.48■■□□□ 1.19
CCM2-218ENST00000541586 LHX4Q969G2 390 aa22.48■■□□□ 1.19
CCM2-218ENST00000541586 ID3Q02535 119 aa22.47■■□□□ 1.19
CCM2-218ENST00000541586 ACOT7LQ6ZUV0 252 aa22.47■■□□□ 1.19
CCM2-218ENST00000541586 TMUB2Q71RG4 321 aa22.47■■□□□ 1.19
CCM2-218ENST00000541586 INO80EQ8NBZ0 244 aaPredicted RBP22.47■■□□□ 1.19
CCM2-218ENST00000541586 OR4P4Q8NGL7 312 aa22.47■■□□□ 1.19
CCM2-218ENST00000541586 SLC35D1Q9NTN3 355 aa22.47■■□□□ 1.19
CCM2-218ENST00000541586 RCL1Q9Y2P8 373 aaKnown RBP22.47■■□□□ 1.19
CCM2-218ENST00000541586 BUB1B-PAK6H3BSN5 160 aa22.46■■□□□ 1.19
CCM2-218ENST00000541586 TSC22D2O75157 780 aa22.46■■□□□ 1.19
CCM2-218ENST00000541586 NXPH3O95157 252 aa22.46■■□□□ 1.19
CCM2-218ENST00000541586 KLRD1Q13241 179 aa22.46■■□□□ 1.19
CCM2-218ENST00000541586 H2BFWTQ7Z2G1 175 aa22.46■■□□□ 1.19
CCM2-218ENST00000541586 TGIF2LXQ8IUE1 241 aa22.46■■□□□ 1.19
CCM2-218ENST00000541586 OR11H6Q8NGC7 330 aa22.46■■□□□ 1.19
CCM2-218ENST00000541586 RBMXL1Q96E39 390 aaKnown RBP22.46■■□□□ 1.19
CCM2-218ENST00000541586 NABP2Q9BQ15 211 aa22.46■■□□□ 1.19
CCM2-218ENST00000541586 UNKLQ9H9P5 680 aaKnown RBP22.46■■□□□ 1.19
CCM2-218ENST00000541586 SONP18583 2426 aaKnown RBP22.46■■□□□ 1.19
CCM2-218ENST00000541586 OR2F2O95006 317 aa22.45■■□□□ 1.19
CCM2-218ENST00000541586 S100A11P31949 105 aa22.45■■□□□ 1.19
CCM2-218ENST00000541586 POLR2GP62487 172 aaKnown RBP eCLIP22.45■■□□□ 1.19
CCM2-218ENST00000541586 OR2F1Q13607 317 aa22.45■■□□□ 1.19
CCM2-218ENST00000541586 ZNF345Q14585 488 aa22.45■■□□□ 1.19
CCM2-218ENST00000541586 RTL8BQ17RB0 113 aa22.45■■□□□ 1.19
CCM2-218ENST00000541586 HCP5Q6MZN7 132 aa22.45■■□□□ 1.19
CCM2-218ENST00000541586 OR5AN1Q8NGI8 311 aa22.45■■□□□ 1.19
CCM2-218ENST00000541586 ARL6Q9H0F7 186 aa22.45■■□□□ 1.19
CCM2-218ENST00000541586 MAGT1Q9H0U3 335 aa22.45■■□□□ 1.19
CCM2-218ENST00000541586 HEXA-AS1Q9H8Q6 139 aa22.45■■□□□ 1.19
CCM2-218ENST00000541586 COA4Q9NYJ1 87 aa22.45■■□□□ 1.19
CCM2-218ENST00000541586 ANK3Q12955 4377 aaKnown RBP22.45■■□□□ 1.19
CCM2-218ENST00000541586 HIVEP2P31629 2446 aa22.45■■□□□ 1.18
CCM2-218ENST00000541586 A0A1W2PRD5 423 aa22.45■■□□□ 1.18
CCM2-218ENST00000541586 A0A1W2PRF3 423 aa22.45■■□□□ 1.18
CCM2-218ENST00000541586 A0A1W2PRM7 423 aa22.45■■□□□ 1.18
CCM2-218ENST00000541586 H0YJW9 148 aa22.45■■□□□ 1.18
CCM2-218ENST00000541586 NQO2P16083 231 aa22.45■■□□□ 1.18
CCM2-218ENST00000541586 AMMECR1Q9Y4X0 333 aaPredicted RBP22.45■■□□□ 1.18
CCM2-218ENST00000541586 IGKV1-16P04430 117 aa22.44■■□□□ 1.18
CCM2-218ENST00000541586 C4BPBP20851 252 aa22.44■■□□□ 1.18
CCM2-218ENST00000541586 OPCMLQ14982 345 aa22.44■■□□□ 1.18
CCM2-218ENST00000541586 MIDNQ504T8 468 aa22.44■■□□□ 1.18
CCM2-218ENST00000541586 VKORC1L1Q8N0U8 176 aa22.44■■□□□ 1.18
CCM2-218ENST00000541586 KCNRGQ8N5I3 272 aa22.44■■□□□ 1.18
CCM2-218ENST00000541586 DMBX1Q8NFW5 382 aa22.44■■□□□ 1.18
CCM2-218ENST00000541586 TRAV40A0A0B4J280 105 aa22.43■■□□□ 1.18
CCM2-218ENST00000541586 A0A0D9SG52 128 aa22.43■■□□□ 1.18
CCM2-218ENST00000541586 MSGN1A6NI15 193 aa22.43■■□□□ 1.18
CCM2-218ENST00000541586 E5RGE8 158 aa22.43■■□□□ 1.18
CCM2-218ENST00000541586 APOA2P02652 100 aa22.43■■□□□ 1.18
CCM2-218ENST00000541586 ERVK-16P61578 105 aa22.43■■□□□ 1.18
CCM2-218ENST00000541586 TAGLNQ01995 201 aaKnown RBP22.43■■□□□ 1.18
CCM2-218ENST00000541586 DHRS7BQ6IAN0 325 aaPredicted RBP22.43■■□□□ 1.18
CCM2-218ENST00000541586 SSX9Q7RTT3 188 aa22.43■■□□□ 1.18
CCM2-218ENST00000541586 NANPQ8TBE9 248 aa22.43■■□□□ 1.18
CCM2-218ENST00000541586 GON7Q9BXV9 100 aa22.43■■□□□ 1.18
CCM2-218ENST00000541586 NSG2Q9Y328 171 aa22.43■■□□□ 1.18
CCM2-218ENST00000541586 INAFM1C9JVW0 142 aa22.43■■□□□ 1.18
CCM2-218ENST00000541586 ARG1P05089 322 aa22.43■■□□□ 1.18
CCM2-218ENST00000541586 IGHV4-38-2P0DP08 117 aa22.43■■□□□ 1.18
CCM2-218ENST00000541586 HOXB4P17483 251 aaPredicted RBP22.43■■□□□ 1.18
CCM2-218ENST00000541586 CENPVL3A0A0U1RRI6 287 aa22.42■■□□□ 1.18
CCM2-218ENST00000541586 RNASEK-C17orf49H0YIS7 233 aa22.42■■□□□ 1.18
CCM2-218ENST00000541586 SSSCA1O60232 199 aa22.42■■□□□ 1.18
CCM2-218ENST00000541586 RRASP10301 218 aa22.42■■□□□ 1.18
CCM2-218ENST00000541586 NUP62P37198 522 aaPredicted RBP22.42■■□□□ 1.18
CCM2-218ENST00000541586 GPR157Q5UAW9 335 aa22.42■■□□□ 1.18
CCM2-218ENST00000541586 AQP10Q96PS8 301 aa22.42■■□□□ 1.18
CCM2-218ENST00000541586 C11orf1Q9H5F2 150 aa22.42■■□□□ 1.18
CCM2-218ENST00000541586 ZFHX3Q15911 3703 aa22.42■■□□□ 1.18
CCM2-218ENST00000541586 ODF3BA8MYP8 253 aa22.41■■□□□ 1.18
CCM2-218ENST00000541586 LY6LH3BQJ8 138 aa22.41■■□□□ 1.18
CCM2-218ENST00000541586 H7C2Y5 167 aa22.41■■□□□ 1.18
CCM2-218ENST00000541586 HNF1AP20823 631 aa22.41■■□□□ 1.18
CCM2-218ENST00000541586 SRP14P37108 136 aaKnown RBP22.41■■□□□ 1.18
CCM2-218ENST00000541586 KLF17Q5JT82 389 aaPredicted RBP22.41■■□□□ 1.18
CCM2-218ENST00000541586 SLA2Q9H6Q3 261 aa22.41■■□□□ 1.18
CCM2-218ENST00000541586 CTNNBIP1Q9NSA3 81 aaPredicted RBP22.41■■□□□ 1.18
CCM2-218ENST00000541586 OR9G9P0C7N8 305 aa22.4■■□□□ 1.18
CCM2-218ENST00000541586 RHOVQ96L33 236 aa22.4■■□□□ 1.18
CCM2-218ENST00000541586 TMEM140Q9NV12 185 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms