RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 EBI3Q14213 229 aa7.47□□□□□ -1.21
DDX55-208ENST00000541259 HES1Q14469 280 aa7.47□□□□□ -1.21
DDX55-208ENST00000541259 LY6EQ16553 131 aa7.47□□□□□ -1.21
DDX55-208ENST00000541259 TATDN3Q17R31 274 aa7.47□□□□□ -1.21
DDX55-208ENST00000541259 RTL8BQ17RB0 113 aa7.47□□□□□ -1.21
DDX55-208ENST00000541259 LRRC75BQ2VPJ9 315 aa7.47□□□□□ -1.21
DDX55-208ENST00000541259 TMEM177Q53S58 311 aa7.47□□□□□ -1.21
DDX55-208ENST00000541259 Q6YL49 198 aa7.47□□□□□ -1.21
DDX55-208ENST00000541259 Q6ZNX1 250 aa7.47□□□□□ -1.21
DDX55-208ENST00000541259 PDPNQ86YL7 162 aa7.47□□□□□ -1.21
DDX55-208ENST00000541259 SELENOHQ8IZQ5 122 aaKnown RBP7.47□□□□□ -1.21
DDX55-208ENST00000541259 VKORC1L1Q8N0U8 176 aa7.47□□□□□ -1.21
DDX55-208ENST00000541259 ZNF431Q8TF32 576 aaPredicted RBP7.47□□□□□ -1.21
DDX55-208ENST00000541259 PRDM13Q9H4Q3 707 aa7.47□□□□□ -1.21
DDX55-208ENST00000541259 TNFRSF19Q9NS68 423 aa7.47□□□□□ -1.21
DDX55-208ENST00000541259 CDC42EP3Q9UKI2 254 aa7.47□□□□□ -1.21
DDX55-208ENST00000541259 KCNIP3Q9Y2W7 256 aa7.47□□□□□ -1.21
DDX55-208ENST00000541259 ALG5Q9Y673 324 aa7.47□□□□□ -1.21
DDX55-208ENST00000541259 A0A1B0GVG6 124 aa7.46□□□□□ -1.22
DDX55-208ENST00000541259 A6NDX4 124 aa7.46□□□□□ -1.22
DDX55-208ENST00000541259 SHOXO15266 292 aa7.46□□□□□ -1.22
DDX55-208ENST00000541259 RBFOX2O43251 390 aaKnown RBP eCLIP7.46□□□□□ -1.22
DDX55-208ENST00000541259 HOXA3O43365 443 aaPredicted RBP7.46□□□□□ -1.22
DDX55-208ENST00000541259 CDS2O95674 445 aa7.46□□□□□ -1.22
DDX55-208ENST00000541259 HPRT1P00492 218 aa7.46□□□□□ -1.22
DDX55-208ENST00000541259 MOSP00540 346 aa7.46□□□□□ -1.22
DDX55-208ENST00000541259 IGLV2-23P01705 113 aa7.46□□□□□ -1.22
DDX55-208ENST00000541259 SERPINE2P07093 398 aa7.46□□□□□ -1.22
DDX55-208ENST00000541259 RRASP10301 218 aa7.46□□□□□ -1.22
DDX55-208ENST00000541259 ANXA3P12429 323 aa7.46□□□□□ -1.22
DDX55-208ENST00000541259 TMEM11P17152 192 aa7.46□□□□□ -1.22
DDX55-208ENST00000541259 G6PCP35575 357 aa7.46□□□□□ -1.22
DDX55-208ENST00000541259 ARHGDIBP52566 201 aa7.46□□□□□ -1.22
DDX55-208ENST00000541259 CBX3Q13185 183 aa7.46□□□□□ -1.22
DDX55-208ENST00000541259 C2orf68Q2NKX9 166 aa7.46□□□□□ -1.22
DDX55-208ENST00000541259 TMEM268Q5VZI3 342 aa7.46□□□□□ -1.22
DDX55-208ENST00000541259 LYZL2Q7Z4W2 148 aa7.46□□□□□ -1.22
DDX55-208ENST00000541259 TMEM219Q86XT9 240 aa7.46□□□□□ -1.22
DDX55-208ENST00000541259 THNSL2Q86YJ6 484 aa7.46□□□□□ -1.22
DDX55-208ENST00000541259 C12orf45Q8N5I9 185 aaPredicted RBP7.46□□□□□ -1.22
DDX55-208ENST00000541259 Q8N6K4 173 aa7.46□□□□□ -1.22
DDX55-208ENST00000541259 TCTEX1D1Q8N7M0 179 aa7.46□□□□□ -1.22
DDX55-208ENST00000541259 UXS1Q8NBZ7 420 aa7.46□□□□□ -1.22
DDX55-208ENST00000541259 OR2T10Q8NGZ9 312 aa7.46□□□□□ -1.22
DDX55-208ENST00000541259 OR4S2Q8NH73 311 aa7.46□□□□□ -1.22
DDX55-208ENST00000541259 FLYWCH2Q96CP2 140 aaKnown RBP7.46□□□□□ -1.22
DDX55-208ENST00000541259 TMEM56Q96MV1 263 aa7.46□□□□□ -1.22
DDX55-208ENST00000541259 FANCD2OSQ96PS1 177 aa7.46□□□□□ -1.22
DDX55-208ENST00000541259 DUX5Q96PT3 197 aa7.46□□□□□ -1.22
DDX55-208ENST00000541259 PLSCR3Q9NRY6 295 aa7.46□□□□□ -1.22
DDX55-208ENST00000541259 TMEM56-RWDD3S4R434 201 aa7.46□□□□□ -1.22
DDX55-208ENST00000541259 TRAV3A0A0B4J244 114 aa7.45□□□□□ -1.22
DDX55-208ENST00000541259 A0A0G2JRQ6 117 aa7.45□□□□□ -1.22
DDX55-208ENST00000541259 C7orf66A4D0T2 115 aa7.45□□□□□ -1.22
DDX55-208ENST00000541259 PRAF2O60831 178 aa7.45□□□□□ -1.22
DDX55-208ENST00000541259 CRLF1O75462 422 aa7.45□□□□□ -1.22
DDX55-208ENST00000541259 B3GALNT1O75752 331 aa7.45□□□□□ -1.22
DDX55-208ENST00000541259 DUS4LO95620 317 aaKnown RBP7.45□□□□□ -1.22
DDX55-208ENST00000541259 KRASP01116 189 aa7.45□□□□□ -1.22
DDX55-208ENST00000541259 IGKV1-5P01602 117 aa7.45□□□□□ -1.22
DDX55-208ENST00000541259 HOXB5P09067 269 aa7.45□□□□□ -1.22
DDX55-208ENST00000541259 FAM106CPP0CH98 169 aa7.45□□□□□ -1.22
DDX55-208ENST00000541259 PSG5Q15238 335 aa7.45□□□□□ -1.22
DDX55-208ENST00000541259 AANATQ16613 207 aa7.45□□□□□ -1.22
DDX55-208ENST00000541259 IZUMO4Q1ZYL8 232 aa7.45□□□□□ -1.22
DDX55-208ENST00000541259 DHRS7BQ6IAN0 325 aaPredicted RBP7.45□□□□□ -1.22
DDX55-208ENST00000541259 C11orf88Q6PI97 169 aa7.45□□□□□ -1.22
DDX55-208ENST00000541259 SSX9Q7RTT3 188 aa7.45□□□□□ -1.22
DDX55-208ENST00000541259 ZNF695Q8IW36 515 aa7.45□□□□□ -1.22
DDX55-208ENST00000541259 OR4C13Q8NGP0 309 aa7.45□□□□□ -1.22
DDX55-208ENST00000541259 CD300LFQ8TDQ1 290 aa7.45□□□□□ -1.22
DDX55-208ENST00000541259 MITD1Q8WV92 249 aa7.45□□□□□ -1.22
DDX55-208ENST00000541259 R3HDM4Q96D70 268 aa7.45□□□□□ -1.22
DDX55-208ENST00000541259 SEC22AQ96IW7 307 aa7.45□□□□□ -1.22
DDX55-208ENST00000541259 HARBI1Q96MB7 349 aa7.45□□□□□ -1.22
DDX55-208ENST00000541259 OR51J1Q9H342 316 aa7.45□□□□□ -1.22
DDX55-208ENST00000541259 PLEKHA2Q9HB19 425 aa7.45□□□□□ -1.22
DDX55-208ENST00000541259 GPN1Q9HCN4 374 aaPredicted RBP7.45□□□□□ -1.22
DDX55-208ENST00000541259 FAM212BQ9NTI7 297 aaPredicted RBP7.45□□□□□ -1.22
DDX55-208ENST00000541259 TCF19Q9Y242 345 aa7.45□□□□□ -1.22
DDX55-208ENST00000541259 DBX1A6NMT0 343 aa7.44□□□□□ -1.22
DDX55-208ENST00000541259 MPTX1A8MV57 137 aa7.44□□□□□ -1.22
DDX55-208ENST00000541259 SNRPGP15A8MWD9 76 aa7.44□□□□□ -1.22
DDX55-208ENST00000541259 SLC25A17O43808 307 aa7.44□□□□□ -1.22
DDX55-208ENST00000541259 CREBL2O60519 120 aaPredicted RBP7.44□□□□□ -1.22
DDX55-208ENST00000541259 ADAP1O75689 374 aa7.44□□□□□ -1.22
DDX55-208ENST00000541259 CRYGBP07316 175 aa7.44□□□□□ -1.22
DDX55-208ENST00000541259 OR9G9P0C7N8 305 aa7.44□□□□□ -1.22
DDX55-208ENST00000541259 MRGPRG-AS1Q2M3A8 158 aa7.44□□□□□ -1.22
DDX55-208ENST00000541259 Q6ZRM9 215 aa7.44□□□□□ -1.22
DDX55-208ENST00000541259 LGI3Q8N145 548 aa7.44□□□□□ -1.22
DDX55-208ENST00000541259 SLC35G3Q8N808 338 aa7.44□□□□□ -1.22
DDX55-208ENST00000541259 LRTM2Q8N967 370 aa7.44□□□□□ -1.22
DDX55-208ENST00000541259 DMBX1Q8NFW5 382 aa7.44□□□□□ -1.22
DDX55-208ENST00000541259 NPBQ8NG41 125 aa7.44□□□□□ -1.22
DDX55-208ENST00000541259 COQ8AQ8NI60 647 aa7.44□□□□□ -1.22
DDX55-208ENST00000541259 OSR1Q8TAX0 266 aaPredicted RBP7.44□□□□□ -1.22
DDX55-208ENST00000541259 RBPMSQ93062 196 aaKnown RBP7.44□□□□□ -1.22
DDX55-208ENST00000541259 GPR146Q96CH1 333 aa7.44□□□□□ -1.22
DDX55-208ENST00000541259 PHB2Q99623 299 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms