RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	RBM7	Q9Y580	266 aa	Known RBP	4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	USP9X	Q93008	2570 aa	Predicted RBP	4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	IGHV3-64D	A0A0J9YX35	117 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	ZNF320	A2RRD8	509 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	CD300LB	A8K4G0	201 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	TFPI2	P48307	235 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	MEF2B	Q02080	365 aa	Predicted RBP	4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	TMEM170A	Q8WVE7	144 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	MBD3L1	Q8WWY6	194 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	C10orf35	Q96D05	121 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	PIMREG	Q9BSJ6	248 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	CXXC4	Q9H2H0	198 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	PPIAL4A	Q9Y536	164 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	OR5B21	A6NL26	309 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	SYNGR2	O43760	224 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	PAGE4	O60829	102 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	LILRA1	O75019	489 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	GYPA	P02724	150 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	COX5A	P20674	150 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	F2R	P25116	425 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	GPM6A	P51674	278 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	UBE2G2	P60604	165 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	PSG4	Q00888	419 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	ZIC4	Q8N9L1	334 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	DOCK7	Q96N67	2140 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	MS4A10	Q96PG2	267 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	TMEM204	Q9BSN7	226 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	IL19	Q9UHD0	177 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	FREM2	Q5SZK8	3169 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	MARCH11	A6NNE9	402 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	KBTBD11	O94819	623 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	HRAS	P01112	189 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	IFNA1	P01562	189 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	GPR6	P46095	362 aa	Predicted RBP	4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	PCP4	P48539	62 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	CNN1	P51911	297 aa	Known RBP	4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	FUT6	P51993	359 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	GNG3	P63215	75 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	OR8B8	Q15620	311 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	SPINK9	Q5DT21	86 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	TOMM20L	Q6UXN7	152 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	DPPA3	Q6W0C5	159 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	CYP2G1P	Q6ZSU1	146 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783		Q8IYB0	196 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	SAP30L	Q9HAJ7	183 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	OR1A1	Q9P1Q5	309 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	NAGK	Q9UJ70	344 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	PAM16	Q9Y3D7	125 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	CLDN1	O95832	211 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	HPRT1	P00492	218 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	IGKV1-39	P01597	117 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	IGKV1D-39	P04432	117 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	COL8A2	P25067	703 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	OR3A1	P47881	315 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	PSMB3	P49720	205 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	BSPH1	Q075Z2	132 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	LRRC75B	Q2VPJ9	315 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	TMEM41B	Q5BJD5	291 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	DMRTA1	Q5VZB9	504 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	ACSM6	Q6P461	480 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	ASCL4	Q6XD76	172 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	GBGT1	Q8N5D6	347 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	IMMP2L	Q96T52	175 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	PYGO2	Q9BRQ0	406 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	OR6C3	Q9NZP0	311 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	KCNS2	Q9ULS6	477 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	TRAPPC1	Q9Y5R8	145 aa		4.75	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	SPRY3	O43610	288 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	TNFSF13	O75888	250 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	CECR9	P0C854	216 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	HIST1H3A	P68431	136 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	ADORA2A-AS1	P86434	159 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	COA6	Q5JTJ3	125 aa	Known RBP	4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	ACTL10	Q5JWF8	245 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	C1orf194	Q5T5A4	169 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	ZNF474	Q6S9Z5	364 aa	Predicted RBP	4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	OR2Z1	Q8NG97	314 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	OR5D13	Q8NGL4	314 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	OR5P3	Q8WZ94	311 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	DERL1	Q9BUN8	251 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	WDR61	Q9GZS3	305 aa	Known RBP	4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	PATZ1	Q9HBE1	687 aa	Known RBP	4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	SLC25A15	Q9Y619	301 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	TRAV38-1	A0A0B4J264	116 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	hCG_38984	A0A1B0GV85	526 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	TMEM210	A6NLX4	147 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	DLEU1	O43261	78 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	NXPH2	O95156	264 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	IGKV1-5	P01602	117 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	RAB4A	P20338	218 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	NPPC	P23582	126 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	IL3RA	P26951	378 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	SLC38A11	Q08AI6	406 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	SMIM21	Q3B7S5	101 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	ARSJ	Q5FYB0	599 aa	Predicted RBP	4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	OR56B2P	Q8NGI1	322 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	OR10J5	Q8NHC4	309 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	SLC25A40	Q8TBP6	338 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	TAF15	Q92804	592 aa	Known RBP eCLIP	4.74	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms