RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 RTL8BQ17RB0 113 aa8.42□□□□□ -1.06
VPS33A-204ENST00000540669 TRIM16LQ309B1 348 aa8.42□□□□□ -1.06
VPS33A-204ENST00000540669 SGPP2Q8IWX5 399 aa8.42□□□□□ -1.06
VPS33A-204ENST00000540669 ZNF431Q8TF32 576 aaPredicted RBP8.42□□□□□ -1.06
VPS33A-204ENST00000540669 RBMXL1Q96E39 390 aaKnown RBP8.42□□□□□ -1.06
VPS33A-204ENST00000540669 RITA1Q96K30 269 aa8.42□□□□□ -1.06
VPS33A-204ENST00000540669 SEC22CQ9BRL7 303 aa8.42□□□□□ -1.06
VPS33A-204ENST00000540669 PGPEP1Q9NXJ5 209 aa8.42□□□□□ -1.06
VPS33A-204ENST00000540669 PRELID3BQ9Y3B1 194 aa8.42□□□□□ -1.06
VPS33A-204ENST00000540669 POMT1Q9Y6A1 747 aa8.42□□□□□ -1.06
VPS33A-204ENST00000540669 PLXNB1O43157 2135 aa8.41□□□□□ -1.06
VPS33A-204ENST00000540669 TET2Q6N021 2002 aaPredicted RBP8.41□□□□□ -1.06
VPS33A-204ENST00000540669 IGHV3-72A0A0B4J1Y9 119 aa8.41□□□□□ -1.06
VPS33A-204ENST00000540669 A0A0G2JRQ6 117 aa8.41□□□□□ -1.06
VPS33A-204ENST00000540669 CHST1O43916 411 aa8.41□□□□□ -1.06
VPS33A-204ENST00000540669 FCGR3BO75015 233 aa8.41□□□□□ -1.06
VPS33A-204ENST00000540669 CRYZL1O95825 349 aa8.41□□□□□ -1.06
VPS33A-204ENST00000540669 HPRT1P00492 218 aa8.41□□□□□ -1.06
VPS33A-204ENST00000540669 MOSP00540 346 aa8.41□□□□□ -1.06
VPS33A-204ENST00000540669 IGKV1D-33P01593 117 aa8.41□□□□□ -1.06
VPS33A-204ENST00000540669 IGKV1-33P01594 117 aa8.41□□□□□ -1.06
VPS33A-204ENST00000540669 IGHV4-59P01825 116 aa8.41□□□□□ -1.06
VPS33A-204ENST00000540669 AMY1AP04745 511 aa8.41□□□□□ -1.06
VPS33A-204ENST00000540669 AKR1C4P17516 323 aa8.41□□□□□ -1.06
VPS33A-204ENST00000540669 BRS3P32247 399 aa8.41□□□□□ -1.06
VPS33A-204ENST00000540669 ARHGDIBP52566 201 aa8.41□□□□□ -1.06
VPS33A-204ENST00000540669 OR8H1Q8NGG4 311 aa8.41□□□□□ -1.06
VPS33A-204ENST00000540669 OR52B4Q8NGK2 314 aa8.41□□□□□ -1.06
VPS33A-204ENST00000540669 OR4C13Q8NGP0 309 aa8.41□□□□□ -1.06
VPS33A-204ENST00000540669 OR2T10Q8NGZ9 312 aa8.41□□□□□ -1.06
VPS33A-204ENST00000540669 OR5R1Q8NH85 324 aa8.41□□□□□ -1.06
VPS33A-204ENST00000540669 SSMEM1Q8WWF3 244 aa8.41□□□□□ -1.06
VPS33A-204ENST00000540669 RBPMSQ93062 196 aaKnown RBP8.41□□□□□ -1.06
VPS33A-204ENST00000540669 ESM1Q9NQ30 184 aa8.41□□□□□ -1.06
VPS33A-204ENST00000540669 BET1LQ9NYM9 111 aa8.41□□□□□ -1.06
VPS33A-204ENST00000540669 VPREB3Q9UKI3 123 aa8.41□□□□□ -1.06
VPS33A-204ENST00000540669 MARCH11A6NNE9 402 aa8.4□□□□□ -1.06
VPS33A-204ENST00000540669 H3BUX3 64 aa8.4□□□□□ -1.06
VPS33A-204ENST00000540669 TRIM77I1YAP6 450 aa8.4□□□□□ -1.06
VPS33A-204ENST00000540669 FGF16O43320 207 aa8.4□□□□□ -1.06
VPS33A-204ENST00000540669 OR2F2O95006 317 aa8.4□□□□□ -1.06
VPS33A-204ENST00000540669 LGALS7P47929 136 aa8.4□□□□□ -1.06
VPS33A-204ENST00000540669 RAB25P57735 213 aa8.4□□□□□ -1.06
VPS33A-204ENST00000540669 HILS1P60008 231 aa8.4□□□□□ -1.06
VPS33A-204ENST00000540669 UBE2KP61086 200 aa8.4□□□□□ -1.06
VPS33A-204ENST00000540669 SP6Q3SY56 376 aa8.4□□□□□ -1.06
VPS33A-204ENST00000540669 OR2B11Q5JQS5 317 aa8.4□□□□□ -1.06
VPS33A-204ENST00000540669 C16orf82Q7Z2V1 217 aa8.4□□□□□ -1.06
VPS33A-204ENST00000540669 MOB3BQ86TA1 216 aa8.4□□□□□ -1.06
VPS33A-204ENST00000540669 SELENOHQ8IZQ5 122 aaKnown RBP8.4□□□□□ -1.06
VPS33A-204ENST00000540669 SIGLECL1Q8N7X8 197 aa8.4□□□□□ -1.06
VPS33A-204ENST00000540669 SLC35G3Q8N808 338 aa8.4□□□□□ -1.06
VPS33A-204ENST00000540669 C22orf15Q8WYQ4 148 aa8.4□□□□□ -1.06
VPS33A-204ENST00000540669 LSM10Q969L4 123 aaKnown RBP8.4□□□□□ -1.06
VPS33A-204ENST00000540669 RHOVQ96L33 236 aa8.4□□□□□ -1.06
VPS33A-204ENST00000540669 HARBI1Q96MB7 349 aa8.4□□□□□ -1.06
VPS33A-204ENST00000540669 RBM14Q96PK6 669 aaKnown RBP8.4□□□□□ -1.06
VPS33A-204ENST00000540669 SSX3Q99909 188 aa8.4□□□□□ -1.06
VPS33A-204ENST00000540669 PRR13Q9NZ81 148 aa8.4□□□□□ -1.06
VPS33A-204ENST00000540669 ALG5Q9Y673 324 aa8.4□□□□□ -1.06
VPS33A-204ENST00000540669 DNAJC9-AS1A6NH13 148 aa8.39□□□□□ -1.07
VPS33A-204ENST00000540669 PITX3O75364 302 aa8.39□□□□□ -1.07
VPS33A-204ENST00000540669 DHFRP00374 187 aa8.39□□□□□ -1.07
VPS33A-204ENST00000540669 HLA-DRB1P01911 266 aa8.39□□□□□ -1.07
VPS33A-204ENST00000540669 SAA1P0DJI8 122 aaPredicted RBP8.39□□□□□ -1.07
VPS33A-204ENST00000540669 ANXA3P12429 323 aa8.39□□□□□ -1.07
VPS33A-204ENST00000540669 NQO2P16083 231 aa8.39□□□□□ -1.07
VPS33A-204ENST00000540669 VDAC1P21796 283 aa8.39□□□□□ -1.07
VPS33A-204ENST00000540669 VAMP1P23763 118 aa8.39□□□□□ -1.07
VPS33A-204ENST00000540669 CD24P25063 80 aa8.39□□□□□ -1.07
VPS33A-204ENST00000540669 CNTFRP26992 372 aa8.39□□□□□ -1.07
VPS33A-204ENST00000540669 LPAR6P43657 344 aa8.39□□□□□ -1.07
VPS33A-204ENST00000540669 IL15RAQ13261 267 aa8.39□□□□□ -1.07
VPS33A-204ENST00000540669 PSG5Q15238 335 aa8.39□□□□□ -1.07
VPS33A-204ENST00000540669 SLC9A3R2Q15599 337 aa8.39□□□□□ -1.07
VPS33A-204ENST00000540669 C4orf46Q504U0 113 aa8.39□□□□□ -1.07
VPS33A-204ENST00000540669 PDLIM3Q53GG5 364 aaPredicted RBP8.39□□□□□ -1.07
VPS33A-204ENST00000540669 OR4A47Q6IF82 309 aa8.39□□□□□ -1.07
VPS33A-204ENST00000540669 FAM219AQ8IW50 185 aa8.39□□□□□ -1.07
VPS33A-204ENST00000540669 FOXRED2Q8IWF2 684 aa8.39□□□□□ -1.07
VPS33A-204ENST00000540669 C5orf56Q8N8D9 126 aa8.39□□□□□ -1.07
VPS33A-204ENST00000540669 Q8N9W7 124 aa8.39□□□□□ -1.07
VPS33A-204ENST00000540669 TMEM167AQ8TBQ9 72 aa8.39□□□□□ -1.07
VPS33A-204ENST00000540669 CHAC2Q8WUX2 184 aa8.39□□□□□ -1.07
VPS33A-204ENST00000540669 FLYWCH2Q96CP2 140 aaKnown RBP8.39□□□□□ -1.07
VPS33A-204ENST00000540669 R3HDM4Q96D70 268 aa8.39□□□□□ -1.07
VPS33A-204ENST00000540669 BEX1Q9HBH7 125 aa8.39□□□□□ -1.07
VPS33A-204ENST00000540669 TPSG1Q9NRR2 321 aa8.39□□□□□ -1.07
VPS33A-204ENST00000540669 COA4Q9NYJ1 87 aa8.39□□□□□ -1.07
VPS33A-204ENST00000540669 ZNF580Q9UK33 172 aa8.39□□□□□ -1.07
VPS33A-204ENST00000540669 KCNIP3Q9Y2W7 256 aa8.39□□□□□ -1.07
VPS33A-204ENST00000540669 FAM96BQ9Y3D0 163 aa8.39□□□□□ -1.07
VPS33A-204ENST00000540669 TENM1Q9UKZ4 2725 aa8.39□□□□□ -1.07
VPS33A-204ENST00000540669 PIGBOS1A0A0B4J2F0 54 aa8.38□□□□□ -1.07
VPS33A-204ENST00000540669 BTBD17A6NE02 478 aa8.38□□□□□ -1.07
VPS33A-204ENST00000540669 RRHO14718 337 aa8.38□□□□□ -1.07
VPS33A-204ENST00000540669 NBR2O15453 112 aa8.38□□□□□ -1.07
VPS33A-204ENST00000540669 HOXA3O43365 443 aaPredicted RBP8.38□□□□□ -1.07
VPS33A-204ENST00000540669 CREBL2O60519 120 aaPredicted RBP8.38□□□□□ -1.07
VPS33A-204ENST00000540669 KBTBD11O94819 623 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms