RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 ZXDAP98168 799 aa7.98□□□□□ -1.13
CLIP1-214ENST00000540539 ACSM6Q6P461 480 aa7.98□□□□□ -1.13
CLIP1-214ENST00000540539 KCTD18Q6PI47 426 aaPredicted RBP7.98□□□□□ -1.13
CLIP1-214ENST00000540539 C8orf86Q6ZUL3 223 aa7.98□□□□□ -1.13
CLIP1-214ENST00000540539 ZNF611Q8N823 705 aa7.98□□□□□ -1.13
CLIP1-214ENST00000540539 OR8B12Q8NGG6 310 aa7.98□□□□□ -1.13
CLIP1-214ENST00000540539 ABHD14BQ96IU4 210 aa7.98□□□□□ -1.13
CLIP1-214ENST00000540539 HDHD3Q9BSH5 251 aaPredicted RBP7.98□□□□□ -1.13
CLIP1-214ENST00000540539 OR10A2Q9H208 303 aa7.98□□□□□ -1.13
CLIP1-214ENST00000540539 DNAJB12Q9NXW2 375 aaKnown RBP7.98□□□□□ -1.13
CLIP1-214ENST00000540539 ZNF391Q9UJN7 358 aa7.98□□□□□ -1.13
CLIP1-214ENST00000540539 TECTAO75443 2155 aa7.97□□□□□ -1.13
CLIP1-214ENST00000540539 A0A1W2PQF6 199 aa7.97□□□□□ -1.13
CLIP1-214ENST00000540539 HBZP02008 142 aa7.97□□□□□ -1.13
CLIP1-214ENST00000540539 SPINK8P0C7L1 97 aa7.97□□□□□ -1.13
CLIP1-214ENST00000540539 POLR2LP62875 67 aaKnown RBP7.97□□□□□ -1.13
CLIP1-214ENST00000540539 ID3Q02535 119 aa7.97□□□□□ -1.13
CLIP1-214ENST00000540539 KIR3DS1Q14943 382 aa7.97□□□□□ -1.13
CLIP1-214ENST00000540539 TNXAQ16473 311 aa7.97□□□□□ -1.13
CLIP1-214ENST00000540539 DOK3Q7L591 496 aa7.97□□□□□ -1.13
CLIP1-214ENST00000540539 PRR22Q8IZ63 422 aa7.97□□□□□ -1.13
CLIP1-214ENST00000540539 RNF133Q8WVZ7 376 aa7.97□□□□□ -1.13
CLIP1-214ENST00000540539 SPIN2AQ99865 258 aa7.97□□□□□ -1.13
CLIP1-214ENST00000540539 SPIN2BQ9BPZ2 258 aa7.97□□□□□ -1.13
CLIP1-214ENST00000540539 ANAPC13Q9BS18 74 aa7.97□□□□□ -1.13
CLIP1-214ENST00000540539 ZDBF2Q9HCK1 2354 aa7.97□□□□□ -1.13
CLIP1-214ENST00000540539 SPAG17Q6Q759 2223 aa7.97□□□□□ -1.13
CLIP1-214ENST00000540539 A6NDN8 102 aa7.97□□□□□ -1.13
CLIP1-214ENST00000540539 FOXI3A8MTJ6 420 aaPredicted RBP7.97□□□□□ -1.13
CLIP1-214ENST00000540539 M0R2Z0 102 aa7.97□□□□□ -1.13
CLIP1-214ENST00000540539 BLVRBP30043 206 aaPredicted RBP7.97□□□□□ -1.13
CLIP1-214ENST00000540539 MYBPHQ13203 477 aa7.97□□□□□ -1.13
CLIP1-214ENST00000540539 CST6Q15828 149 aa7.97□□□□□ -1.13
CLIP1-214ENST00000540539 ZNF658BQ4V348 819 aaPredicted RBP7.97□□□□□ -1.13
CLIP1-214ENST00000540539 TMEM136Q6ZRR5 245 aa7.97□□□□□ -1.13
CLIP1-214ENST00000540539 Q6ZVL8 140 aa7.97□□□□□ -1.13
CLIP1-214ENST00000540539 OOSP2Q86WS3 158 aa7.97□□□□□ -1.13
CLIP1-214ENST00000540539 UEVLDQ8IX04 471 aa7.97□□□□□ -1.13
CLIP1-214ENST00000540539 ZNF295-AS1Q8N0V1 137 aa7.97□□□□□ -1.13
CLIP1-214ENST00000540539 OR51T1Q8NGJ9 327 aa7.97□□□□□ -1.13
CLIP1-214ENST00000540539 LSM10Q969L4 123 aaKnown RBP7.97□□□□□ -1.13
CLIP1-214ENST00000540539 APOBEC3DQ96AK3 386 aaPredicted RBP7.97□□□□□ -1.13
CLIP1-214ENST00000540539 RAB37Q96AX2 223 aa7.97□□□□□ -1.13
CLIP1-214ENST00000540539 ANXA10Q9UJ72 324 aa7.97□□□□□ -1.13
CLIP1-214ENST00000540539 HILPDAQ9Y5L2 63 aa7.97□□□□□ -1.13
CLIP1-214ENST00000540539 IGKV1D-42A0A075B6H8 117 aa7.96□□□□□ -1.13
CLIP1-214ENST00000540539 KBTBD11-OT1A0A1B0GTJ5 212 aa7.96□□□□□ -1.13
CLIP1-214ENST00000540539 DEGS1O15121 323 aa7.96□□□□□ -1.13
CLIP1-214ENST00000540539 HSBP1O75506 76 aa7.96□□□□□ -1.13
CLIP1-214ENST00000540539 APOA2P02652 100 aa7.96□□□□□ -1.13
CLIP1-214ENST00000540539 MT-ND6P03923 174 aa7.96□□□□□ -1.13
CLIP1-214ENST00000540539 DPTQ07507 201 aa7.96□□□□□ -1.13
CLIP1-214ENST00000540539 ALKBH6Q3KRA9 238 aa7.96□□□□□ -1.13
CLIP1-214ENST00000540539 CBLN3Q6UW01 205 aa7.96□□□□□ -1.13
CLIP1-214ENST00000540539 HSD11B1LQ7Z5J1 315 aa7.96□□□□□ -1.13
CLIP1-214ENST00000540539 ZNF525Q8N782 197 aa7.96□□□□□ -1.13
CLIP1-214ENST00000540539 OR5D13Q8NGL4 314 aa7.96□□□□□ -1.13
CLIP1-214ENST00000540539 OR52N5Q8NH56 324 aa7.96□□□□□ -1.13
CLIP1-214ENST00000540539 DDB2Q92466 427 aa7.96□□□□□ -1.13
CLIP1-214ENST00000540539 SRSF8Q9BRL6 282 aaKnown RBP7.96□□□□□ -1.13
CLIP1-214ENST00000540539 TMEM70Q9BUB7 260 aa7.96□□□□□ -1.13
CLIP1-214ENST00000540539 C1QTNF4Q9BXJ3 329 aa7.96□□□□□ -1.13
CLIP1-214ENST00000540539 FAM206AQ9NX38 181 aa7.96□□□□□ -1.13
CLIP1-214ENST00000540539 VPREB3Q9UKI3 123 aa7.96□□□□□ -1.13
CLIP1-214ENST00000540539 FABP2P12104 132 aa7.96□□□□□ -1.14
CLIP1-214ENST00000540539 P2RY2P41231 377 aa7.96□□□□□ -1.14
CLIP1-214ENST00000540539 ARL16Q0P5N6 197 aa7.96□□□□□ -1.14
CLIP1-214ENST00000540539 PSG7Q13046 419 aa7.96□□□□□ -1.14
CLIP1-214ENST00000540539 LRRC75BQ2VPJ9 315 aa7.96□□□□□ -1.14
CLIP1-214ENST00000540539 ACP7Q6ZNF0 438 aa7.96□□□□□ -1.14
CLIP1-214ENST00000540539 TPRX1Q8N7U7 411 aa7.96□□□□□ -1.14
CLIP1-214ENST00000540539 OR10D3Q8NH80 312 aa7.96□□□□□ -1.14
CLIP1-214ENST00000540539 PIGTQ969N2 578 aa7.96□□□□□ -1.14
CLIP1-214ENST00000540539 CACNA1IQ9P0X4 2223 aa7.96□□□□□ -1.14
CLIP1-214ENST00000540539 USP34Q70CQ2 3546 aa7.96□□□□□ -1.14
CLIP1-214ENST00000540539 CTXND1A0A1B0GTU2 59 aa7.95□□□□□ -1.14
CLIP1-214ENST00000540539 SPINK4O60575 86 aa7.95□□□□□ -1.14
CLIP1-214ENST00000540539 RPL18Q07020 188 aaKnown RBP7.95□□□□□ -1.14
CLIP1-214ENST00000540539 FAM53BQ14153 422 aa7.95□□□□□ -1.14
CLIP1-214ENST00000540539 WFDC2Q14508 124 aa7.95□□□□□ -1.14
CLIP1-214ENST00000540539 PRICKLE4Q2TBC4 344 aa7.95□□□□□ -1.14
CLIP1-214ENST00000540539 SLC35E4Q6ICL7 350 aa7.95□□□□□ -1.14
CLIP1-214ENST00000540539 LRRC25Q8N386 305 aaPredicted RBP7.95□□□□□ -1.14
CLIP1-214ENST00000540539 LMX1AQ8TE12 382 aa7.95□□□□□ -1.14
CLIP1-214ENST00000540539 CLDN23Q96B33 292 aa7.95□□□□□ -1.14
CLIP1-214ENST00000540539 ZNF257Q9Y2Q1 563 aa7.95□□□□□ -1.14
CLIP1-214ENST00000540539 SIT1Q9Y3P8 196 aa7.95□□□□□ -1.14
CLIP1-214ENST00000540539 ZNF850A8MQ14 1090 aa7.95□□□□□ -1.14
CLIP1-214ENST00000540539 MT-ATP8P03928 68 aa7.95□□□□□ -1.14
CLIP1-214ENST00000540539 PSG2P11465 335 aa7.95□□□□□ -1.14
CLIP1-214ENST00000540539 DRD3P35462 400 aa7.95□□□□□ -1.14
CLIP1-214ENST00000540539 ATP5G3P48201 142 aa7.95□□□□□ -1.14
CLIP1-214ENST00000540539 INSL3P51460 131 aa7.95□□□□□ -1.14
CLIP1-214ENST00000540539 MMD2Q8IY49 270 aa7.95□□□□□ -1.14
CLIP1-214ENST00000540539 OR5AS1Q8N127 324 aa7.95□□□□□ -1.14
CLIP1-214ENST00000540539 RLN3Q8WXF3 142 aa7.95□□□□□ -1.14
CLIP1-214ENST00000540539 GRAMD2BQ96HH9 432 aa7.95□□□□□ -1.14
CLIP1-214ENST00000540539 TMEM222Q9H0R3 208 aa7.95□□□□□ -1.14
CLIP1-214ENST00000540539 RALYQ9UKM9 306 aaKnown RBP7.95□□□□□ -1.14
CLIP1-214ENST00000540539 LRRK1Q38SD2 2015 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms