RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 SH2D2AQ9NP31 389 aa9.43□□□□□ -0.9
PBX1-212ENST00000540236 CEACAM5P06731 702 aa9.43□□□□□ -0.9
PBX1-212ENST00000540236 FTH1P19P0C7X4 201 aa9.43□□□□□ -0.9
PBX1-212ENST00000540236 BVES-AS1Q5T3Y7 98 aa9.43□□□□□ -0.9
PBX1-212ENST00000540236 MRPL52Q86TS9 123 aaKnown RBP9.43□□□□□ -0.9
PBX1-212ENST00000540236 PSG11Q9UQ72 335 aa9.43□□□□□ -0.9
PBX1-212ENST00000540236 PARP14Q460N5 1801 aa9.43□□□□□ -0.9
PBX1-212ENST00000540236 SSTR5P35346 364 aa9.42□□□□□ -0.9
PBX1-212ENST00000540236 PET117Q6UWS5 81 aa9.42□□□□□ -0.9
PBX1-212ENST00000540236 CELA2BP08218 269 aaPredicted RBP9.42□□□□□ -0.9
PBX1-212ENST00000540236 CD1BP29016 333 aa9.42□□□□□ -0.9
PBX1-212ENST00000540236 ARTNQ5T4W7 220 aa9.42□□□□□ -0.9
PBX1-212ENST00000540236 SMIM20Q8N5G0 67 aa9.42□□□□□ -0.9
PBX1-212ENST00000540236 SIGLEC12Q96PQ1 595 aa9.42□□□□□ -0.9
PBX1-212ENST00000540236 HIST1H4GQ99525 98 aa9.42□□□□□ -0.9
PBX1-212ENST00000540236 IGHV2-26A0A0B4J1V2 119 aa9.42□□□□□ -0.9
PBX1-212ENST00000540236 K7EQS6 105 aa9.42□□□□□ -0.9
PBX1-212ENST00000540236 CELA3BP08861 270 aa9.42□□□□□ -0.9
PBX1-212ENST00000540236 MESP2Q0VG99 397 aa9.42□□□□□ -0.9
PBX1-212ENST00000540236 ARPC1AQ92747 370 aa9.42□□□□□ -0.9
PBX1-212ENST00000540236 SPSB1Q96BD6 273 aa9.42□□□□□ -0.9
PBX1-212ENST00000540236 ASCC3Q8N3C0 2202 aaKnown RBP9.42□□□□□ -0.9
PBX1-212ENST00000540236 IGHV3-48P01763 117 aa9.42□□□□□ -0.9
PBX1-212ENST00000540236 HIST1H1AQ02539 215 aaPredicted RBP9.42□□□□□ -0.9
PBX1-212ENST00000540236 SPATA31B1PQ5VZV4 182 aa9.42□□□□□ -0.9
PBX1-212ENST00000540236 OR8G5Q8NG78 346 aa9.42□□□□□ -0.9
PBX1-212ENST00000540236 ZNF257Q9Y2Q1 563 aa9.42□□□□□ -0.9
PBX1-212ENST00000540236 YTHDF2Q9Y5A9 579 aaKnown RBP9.42□□□□□ -0.9
PBX1-212ENST00000540236 RHOBP62745 196 aa9.42□□□□□ -0.9
PBX1-212ENST00000540236 RNPS1Q15287 305 aaKnown RBP9.42□□□□□ -0.9
PBX1-212ENST00000540236 DNASE2BQ8WZ79 361 aa9.42□□□□□ -0.9
PBX1-212ENST00000540236 ASCL2Q99929 193 aa9.42□□□□□ -0.9
PBX1-212ENST00000540236 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.42□□□□□ -0.9
PBX1-212ENST00000540236 GAGE12HA6NDE8 117 aa9.41□□□□□ -0.9
PBX1-212ENST00000540236 UBE2L3P68036 154 aaKnown RBP9.41□□□□□ -0.9
PBX1-212ENST00000540236 YPEL4Q96NS1 127 aa9.41□□□□□ -0.9
PBX1-212ENST00000540236 MRPS16Q9Y3D3 137 aaKnown RBP9.41□□□□□ -0.9
PBX1-212ENST00000540236 FHL5Q5TD97 284 aa9.41□□□□□ -0.9
PBX1-212ENST00000540236 TCF24Q7RTU0 167 aa9.41□□□□□ -0.9
PBX1-212ENST00000540236 OR10D3Q8NH80 312 aa9.41□□□□□ -0.9
PBX1-212ENST00000540236 DEFB126Q9BYW3 111 aa9.41□□□□□ -0.9
PBX1-212ENST00000540236 LHFPL6Q9Y693 200 aa9.41□□□□□ -0.9
PBX1-212ENST00000540236 QSER1Q2KHR3 1735 aa9.41□□□□□ -0.9
PBX1-212ENST00000540236 HLA-DQA1P01909 254 aa9.41□□□□□ -0.9
PBX1-212ENST00000540236 ROM1Q03395 351 aa9.41□□□□□ -0.9
PBX1-212ENST00000540236 FHL1Q13642 323 aa9.41□□□□□ -0.9
PBX1-212ENST00000540236 TPRX1Q8N7U7 411 aa9.41□□□□□ -0.9
PBX1-212ENST00000540236 SVIPQ8NHG7 77 aa9.41□□□□□ -0.9
PBX1-212ENST00000540236 LYPD6BQ8NI32 183 aa9.41□□□□□ -0.9
PBX1-212ENST00000540236 ST20Q9HBF5 79 aa9.41□□□□□ -0.9
PBX1-212ENST00000540236 TMEM52BQ4KMG9 183 aa9.41□□□□□ -0.9
PBX1-212ENST00000540236 SSC4DQ8WTU2 575 aa9.41□□□□□ -0.9
PBX1-212ENST00000540236 ARHGAP21Q5T5U3 1957 aa9.4□□□□□ -0.9
PBX1-212ENST00000540236 STAG3L2P0CL84 134 aa9.4□□□□□ -0.9
PBX1-212ENST00000540236 GUSBP1Q15486 140 aa9.4□□□□□ -0.9
PBX1-212ENST00000540236 FAM89BQ8N5H3 189 aa9.4□□□□□ -0.9
PBX1-212ENST00000540236 C12orf49Q9H741 205 aa9.4□□□□□ -0.9
PBX1-212ENST00000540236 NPVFQ9HCQ7 196 aa9.4□□□□□ -0.9
PBX1-212ENST00000540236 OR2W1Q9Y3N9 320 aa9.4□□□□□ -0.9
PBX1-212ENST00000540236 DOCK4Q8N1I0 1966 aa9.4□□□□□ -0.9
PBX1-212ENST00000540236 PLP2Q04941 152 aa9.4□□□□□ -0.9
PBX1-212ENST00000540236 SRSF7Q16629 238 aaKnown RBP eCLIP9.4□□□□□ -0.9
PBX1-212ENST00000540236 RPP25LQ8N5L8 163 aaKnown RBP9.4□□□□□ -0.9
PBX1-212ENST00000540236 PHF7Q9BWX1 381 aaPredicted RBP9.4□□□□□ -0.9
PBX1-212ENST00000540236 HES4Q9HCC6 221 aa9.4□□□□□ -0.9
PBX1-212ENST00000540236 TAX1BP3O14907 124 aa9.4□□□□□ -0.9
PBX1-212ENST00000540236 PPBPP02775 128 aa9.4□□□□□ -0.9
PBX1-212ENST00000540236 ORM2P19652 201 aa9.4□□□□□ -0.9
PBX1-212ENST00000540236 RABIFP47224 123 aa9.4□□□□□ -0.9
PBX1-212ENST00000540236 TMEM56-RWDD3S4R434 201 aa9.4□□□□□ -0.9
PBX1-212ENST00000540236 DOCK11Q5JSL3 2073 aa9.4□□□□□ -0.9
PBX1-212ENST00000540236 VENTXO95231 258 aa9.4□□□□□ -0.91
PBX1-212ENST00000540236 PRTN3P24158 256 aa9.4□□□□□ -0.91
PBX1-212ENST00000540236 F2RP25116 425 aa9.4□□□□□ -0.91
PBX1-212ENST00000540236 ANKRD33Q7Z3H0 272 aa9.4□□□□□ -0.91
PBX1-212ENST00000540236 LIME1Q9H400 295 aa9.4□□□□□ -0.91
PBX1-212ENST00000540236 BPTFQ12830 3046 aa9.4□□□□□ -0.91
PBX1-212ENST00000540236 TRAV5A0A0B4J249 113 aa9.39□□□□□ -0.91
PBX1-212ENST00000540236 A0A0G2JRQ6 117 aa9.39□□□□□ -0.91
PBX1-212ENST00000540236 MRPL13Q9BYD1 178 aaKnown RBP9.39□□□□□ -0.91
PBX1-212ENST00000540236 P01737 135 aa9.39□□□□□ -0.91
PBX1-212ENST00000540236 LRTM2Q8N967 370 aa9.39□□□□□ -0.91
PBX1-212ENST00000540236 TMUB1Q9BVT8 246 aa9.39□□□□□ -0.91
PBX1-212ENST00000540236 APOHP02749 345 aaPredicted RBP9.39□□□□□ -0.91
PBX1-212ENST00000540236 HERV-K104P63124 156 aa9.39□□□□□ -0.91
PBX1-212ENST00000540236 ATP5G2Q06055 141 aa9.39□□□□□ -0.91
PBX1-212ENST00000540236 C17orf67Q0P5P2 114 aa9.39□□□□□ -0.91
PBX1-212ENST00000540236 OR10J3Q5JRS4 329 aa9.39□□□□□ -0.91
PBX1-212ENST00000540236 WDR82Q6UXN9 313 aa9.39□□□□□ -0.91
PBX1-212ENST00000540236 Q96M66 194 aa9.39□□□□□ -0.91
PBX1-212ENST00000540236 RNF114Q9Y508 228 aa9.39□□□□□ -0.91
PBX1-212ENST00000540236 MS4A18H0YCH9 400 aa9.39□□□□□ -0.91
PBX1-212ENST00000540236 DPTQ07507 201 aa9.39□□□□□ -0.91
PBX1-212ENST00000540236 MS4A18Q3C1V0 323 aa9.39□□□□□ -0.91
PBX1-212ENST00000540236 AAED1Q7RTV5 226 aa9.39□□□□□ -0.91
PBX1-212ENST00000540236 PRNTQ86SH4 94 aa9.39□□□□□ -0.91
PBX1-212ENST00000540236 FGFRL1Q8N441 504 aa9.39□□□□□ -0.91
PBX1-212ENST00000540236 PP6455Q8WZ26 134 aa9.39□□□□□ -0.91
PBX1-212ENST00000540236 IGKV1-9A0A0C4DH69 117 aa9.39□□□□□ -0.91
PBX1-212ENST00000540236 H0Y980 276 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms