RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 DOLPP1Q86YN1 238 aa10.93□□□□□ -0.66
MSH6-210ENST00000540021 LYG1Q8N1E2 194 aa10.93□□□□□ -0.66
MSH6-210ENST00000540021 ZNF645Q8N7E2 425 aa10.93□□□□□ -0.66
MSH6-210ENST00000540021 LRRC29Q8WV35 223 aa10.93□□□□□ -0.66
MSH6-210ENST00000540021 WDYHV1Q96HA8 205 aa10.93□□□□□ -0.66
MSH6-210ENST00000540021 TMEM68Q96MH6 324 aa10.93□□□□□ -0.66
MSH6-210ENST00000540021 C2orf88Q9BSF0 95 aa10.93□□□□□ -0.66
MSH6-210ENST00000540021 SNHG12Q9BXW3 62 aa10.93□□□□□ -0.66
MSH6-210ENST00000540021 MRPL37Q9BZE1 423 aaKnown RBP10.93□□□□□ -0.66
MSH6-210ENST00000540021 WNT10AQ9GZT5 417 aa10.93□□□□□ -0.66
MSH6-210ENST00000540021 ARL2-SNX15V9GYD0 113 aa10.93□□□□□ -0.66
MSH6-210ENST00000540021 OOEPA6NGQ2 149 aa10.93□□□□□ -0.66
MSH6-210ENST00000540021 OR5G3P0C626 314 aa10.93□□□□□ -0.66
MSH6-210ENST00000540021 MEOX1P50221 254 aa10.93□□□□□ -0.66
MSH6-210ENST00000540021 RPL31P62899 125 aaKnown RBP10.93□□□□□ -0.66
MSH6-210ENST00000540021 PCSK4Q6UW60 755 aa10.93□□□□□ -0.66
MSH6-210ENST00000540021 KCNIP2Q9NS61 270 aa10.93□□□□□ -0.66
MSH6-210ENST00000540021 LAMA1P25391 3075 aa10.93□□□□□ -0.66
MSH6-210ENST00000540021 LTBP2Q14767 1821 aa10.93□□□□□ -0.66
MSH6-210ENST00000540021 C20orf202A1L168 122 aa10.92□□□□□ -0.66
MSH6-210ENST00000540021 TOX4O94842 621 aa10.92□□□□□ -0.66
MSH6-210ENST00000540021 IGKV1-39P01597 117 aa10.92□□□□□ -0.66
MSH6-210ENST00000540021 IGKV1D-39P04432 117 aa10.92□□□□□ -0.66
MSH6-210ENST00000540021 RAB4AP20338 218 aa10.92□□□□□ -0.66
MSH6-210ENST00000540021 PCP4P48539 62 aa10.92□□□□□ -0.66
MSH6-210ENST00000540021 HINT1P49773 126 aaPredicted RBP10.92□□□□□ -0.66
MSH6-210ENST00000540021 SMIM21Q3B7S5 101 aa10.92□□□□□ -0.66
MSH6-210ENST00000540021 PRR31Q5SQ13 230 aa10.92□□□□□ -0.66
MSH6-210ENST00000540021 SAXO1Q8IYX7 474 aa10.92□□□□□ -0.66
MSH6-210ENST00000540021 SAP25Q8TEE9 199 aa10.92□□□□□ -0.66
MSH6-210ENST00000540021 ZCCHC14Q8WYQ9 949 aaKnown RBP10.92□□□□□ -0.66
MSH6-210ENST00000540021 DNASE2BQ8WZ79 361 aa10.92□□□□□ -0.66
MSH6-210ENST00000540021 IGHV3OR15-7A0A075B7D8 119 aa10.92□□□□□ -0.66
MSH6-210ENST00000540021 HELTA6NFD8 242 aa10.92□□□□□ -0.66
MSH6-210ENST00000540021 B4E171 279 aa10.92□□□□□ -0.66
MSH6-210ENST00000540021 CELA3BP08861 270 aa10.92□□□□□ -0.66
MSH6-210ENST00000540021 IRF2P14316 349 aa10.92□□□□□ -0.66
MSH6-210ENST00000540021 TSPAN7P41732 249 aa10.92□□□□□ -0.66
MSH6-210ENST00000540021 ETFRF1Q6IPR1 90 aa10.92□□□□□ -0.66
MSH6-210ENST00000540021 Q6ZPA2 131 aa10.92□□□□□ -0.66
MSH6-210ENST00000540021 HAPLN4Q86UW8 402 aa10.92□□□□□ -0.66
MSH6-210ENST00000540021 TPPP3Q9BW30 176 aa10.92□□□□□ -0.66
MSH6-210ENST00000540021 ETV2O00321 342 aaPredicted RBP10.92□□□□□ -0.66
MSH6-210ENST00000540021 KLF7O75840 302 aaPredicted RBP10.92□□□□□ -0.66
MSH6-210ENST00000540021 CXorf1O96002 111 aa10.92□□□□□ -0.66
MSH6-210ENST00000540021 RPL30P62888 115 aaKnown RBP10.92□□□□□ -0.66
MSH6-210ENST00000540021 ASCL4Q6XD76 172 aa10.92□□□□□ -0.66
MSH6-210ENST00000540021 OR5B3Q8NH48 314 aa10.92□□□□□ -0.66
MSH6-210ENST00000540021 GTF3C1Q12789 2109 aa10.91□□□□□ -0.66
MSH6-210ENST00000540021 PQLC2Q6ZP29 291 aa10.91□□□□□ -0.66
MSH6-210ENST00000540021 LINC00596Q86U02 117 aa10.91□□□□□ -0.66
MSH6-210ENST00000540021 PCNX1Q96RV3 2341 aa10.91□□□□□ -0.66
MSH6-210ENST00000540021 NBASA2RRP1 2371 aa10.91□□□□□ -0.66
MSH6-210ENST00000540021 LOC102724200A0A096LPH7 203 aaPredicted RBP10.91□□□□□ -0.66
MSH6-210ENST00000540021 M0QZK8 103 aa10.91□□□□□ -0.66
MSH6-210ENST00000540021 GGCTO75223 188 aaKnown RBP10.91□□□□□ -0.66
MSH6-210ENST00000540021 SPATA45Q537H7 98 aa10.91□□□□□ -0.66
MSH6-210ENST00000540021 Q56UQ5 140 aa10.91□□□□□ -0.66
MSH6-210ENST00000540021 GBGT1Q8N5D6 347 aa10.91□□□□□ -0.66
MSH6-210ENST00000540021 TMEM251Q8N6I4 163 aa10.91□□□□□ -0.66
MSH6-210ENST00000540021 TTTY12Q9BZ98 90 aa10.91□□□□□ -0.66
MSH6-210ENST00000540021 HSBP1L1C9JCN9 74 aa10.91□□□□□ -0.66
MSH6-210ENST00000540021 CRYBB3P26998 211 aa10.91□□□□□ -0.66
MSH6-210ENST00000540021 GNB1P62873 340 aa10.91□□□□□ -0.66
MSH6-210ENST00000540021 ZNF585BQ52M93 769 aa10.91□□□□□ -0.66
MSH6-210ENST00000540021 FAM19A2Q8N3H0 131 aa10.91□□□□□ -0.66
MSH6-210ENST00000540021 SGK494Q96LW2 274 aa10.91□□□□□ -0.66
MSH6-210ENST00000540021 FAM90A26D6RGX4 464 aa10.9□□□□□ -0.66
MSH6-210ENST00000540021 LINC01551Q86U37 167 aa10.9□□□□□ -0.66
MSH6-210ENST00000540021 RBMXL3Q8N7X1 1067 aaKnown RBP10.9□□□□□ -0.66
MSH6-210ENST00000540021 SH2D2AQ9NP31 389 aa10.9□□□□□ -0.66
MSH6-210ENST00000540021 TMEM131Q92545 1883 aa10.9□□□□□ -0.66
MSH6-210ENST00000540021 CBY3A6NI87 242 aa10.9□□□□□ -0.66
MSH6-210ENST00000540021 SPRY3O43610 288 aa10.9□□□□□ -0.66
MSH6-210ENST00000540021 NEURL1O76050 574 aa10.9□□□□□ -0.66
MSH6-210ENST00000540021 VENTXO95231 258 aa10.9□□□□□ -0.66
MSH6-210ENST00000540021 RNPS1Q15287 305 aaKnown RBP10.9□□□□□ -0.66
MSH6-210ENST00000540021 TRAT1Q6PIZ9 186 aa10.9□□□□□ -0.66
MSH6-210ENST00000540021 ERASQ7Z444 233 aa10.9□□□□□ -0.66
MSH6-210ENST00000540021 PPP1R32Q7Z5V6 425 aa10.9□□□□□ -0.66
MSH6-210ENST00000540021 MMD2Q8IY49 270 aa10.9□□□□□ -0.66
MSH6-210ENST00000540021 OCC1Q8TAD7 63 aa10.9□□□□□ -0.66
MSH6-210ENST00000540021 SSBP3Q9BWW4 388 aaPredicted RBP10.9□□□□□ -0.66
MSH6-210ENST00000540021 TRGV5A0A0B4J1U4 118 aa10.9□□□□□ -0.66
MSH6-210ENST00000540021 SELENOVP59797 346 aa10.9□□□□□ -0.66
MSH6-210ENST00000540021 SSPNQ14714 243 aa10.9□□□□□ -0.66
MSH6-210ENST00000540021 ARSJQ5FYB0 599 aaPredicted RBP10.9□□□□□ -0.66
MSH6-210ENST00000540021 COL5A1-AS1Q5SY13 56 aa10.9□□□□□ -0.66
MSH6-210ENST00000540021 TMEM106BQ9NUM4 274 aa10.9□□□□□ -0.66
MSH6-210ENST00000540021 SEMA5BQ9P283 1151 aa10.9□□□□□ -0.66
MSH6-210ENST00000540021 RRHO14718 337 aa10.9□□□□□ -0.67
MSH6-210ENST00000540021 CLDN14O95500 239 aa10.9□□□□□ -0.67
MSH6-210ENST00000540021 IGHV3-48P01763 117 aa10.9□□□□□ -0.67
MSH6-210ENST00000540021 SRIP30626 198 aa10.9□□□□□ -0.67
MSH6-210ENST00000540021 BRS3P32247 399 aa10.9□□□□□ -0.67
MSH6-210ENST00000540021 CCL11P51671 97 aa10.9□□□□□ -0.67
MSH6-210ENST00000540021 FOXL2NBQ6ZUU3 175 aa10.9□□□□□ -0.67
MSH6-210ENST00000540021 POM121L2Q96KW2 1035 aa10.9□□□□□ -0.67
MSH6-210ENST00000540021 PROK2Q9HC23 129 aa10.9□□□□□ -0.67
MSH6-210ENST00000540021 FOXJ2Q9P0K8 574 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms