RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 VMA21Q3ZAQ7 101 aa14.25□□□□□ -0.13
SNRPA1-203ENST00000540017 AKIRIN2Q53H80 203 aa14.25□□□□□ -0.13
SNRPA1-203ENST00000540017 UNQ5815/PRO19632Q6UWF5 114 aa14.25□□□□□ -0.13
SNRPA1-203ENST00000540017 MRPL41Q8IXM3 137 aaKnown RBP14.25□□□□□ -0.13
SNRPA1-203ENST00000540017 VKORC1L1Q8N0U8 176 aa14.25□□□□□ -0.13
SNRPA1-203ENST00000540017 LINC00482Q8N8I6 264 aa14.25□□□□□ -0.13
SNRPA1-203ENST00000540017 ZNF491Q8N8L2 437 aa14.25□□□□□ -0.13
SNRPA1-203ENST00000540017 ZBTB34Q8NCN2 500 aa14.25□□□□□ -0.13
SNRPA1-203ENST00000540017 RAX2Q96IS3 184 aa14.25□□□□□ -0.13
SNRPA1-203ENST00000540017 SLIRPQ9GZT3 109 aaKnown RBP14.25□□□□□ -0.13
SNRPA1-203ENST00000540017 FXYD6Q9H0Q3 95 aa14.25□□□□□ -0.13
SNRPA1-203ENST00000540017 FOXA2Q9Y261 457 aaPredicted RBP14.25□□□□□ -0.13
SNRPA1-203ENST00000540017 RAMP3O60896 148 aa14.24□□□□□ -0.13
SNRPA1-203ENST00000540017 NOL3O60936 208 aaKnown RBP14.24□□□□□ -0.13
SNRPA1-203ENST00000540017 CNIH1O95406 144 aa14.24□□□□□ -0.13
SNRPA1-203ENST00000540017 IGLL1P15814 213 aa14.24□□□□□ -0.13
SNRPA1-203ENST00000540017 CD33P20138 364 aa14.24□□□□□ -0.13
SNRPA1-203ENST00000540017 RAB9AP51151 201 aa14.24□□□□□ -0.13
SNRPA1-203ENST00000540017 TMEM267Q0VDI3 215 aaPredicted RBP14.24□□□□□ -0.13
SNRPA1-203ENST00000540017 PRSS8Q16651 343 aa14.24□□□□□ -0.13
SNRPA1-203ENST00000540017 BEAN1Q3B7T3 259 aa14.24□□□□□ -0.13
SNRPA1-203ENST00000540017 ASPHD1Q5U4P2 390 aa14.24□□□□□ -0.13
SNRPA1-203ENST00000540017 TMEM65Q6PI78 240 aa14.24□□□□□ -0.13
SNRPA1-203ENST00000540017 OR4S2Q8NH73 311 aa14.24□□□□□ -0.13
SNRPA1-203ENST00000540017 P2RX4Q99571 388 aa14.24□□□□□ -0.13
SNRPA1-203ENST00000540017 GNB4Q9HAV0 340 aa14.24□□□□□ -0.13
SNRPA1-203ENST00000540017 M0QYG6 137 aa14.23□□□□□ -0.13
SNRPA1-203ENST00000540017 TPPPO94811 219 aa14.23□□□□□ -0.13
SNRPA1-203ENST00000540017 SLC6A1P30531 599 aa14.23□□□□□ -0.13
SNRPA1-203ENST00000540017 MYCNOSP40205 109 aa14.23□□□□□ -0.13
SNRPA1-203ENST00000540017 ACTBL2Q562R1 376 aa14.23□□□□□ -0.13
SNRPA1-203ENST00000540017 OR6F1Q8NGZ6 308 aa14.23□□□□□ -0.13
SNRPA1-203ENST00000540017 RBM38Q9H0Z9 239 aaKnown RBP14.23□□□□□ -0.13
SNRPA1-203ENST00000540017 ZNF430Q9H8G1 570 aaPredicted RBP14.23□□□□□ -0.13
SNRPA1-203ENST00000540017 MTFP1Q9UDX5 166 aa14.23□□□□□ -0.13
SNRPA1-203ENST00000540017 NOTCH3Q9UM47 2321 aa14.23□□□□□ -0.13
SNRPA1-203ENST00000540017 CCL24O00175 119 aa14.22□□□□□ -0.13
SNRPA1-203ENST00000540017 DGCR2P98153 550 aa14.22□□□□□ -0.13
SNRPA1-203ENST00000540017 SPAG16Q8N0X2 631 aa14.22□□□□□ -0.13
SNRPA1-203ENST00000540017 TCTEX1D1Q8N7M0 179 aa14.22□□□□□ -0.13
SNRPA1-203ENST00000540017 OR51H1Q8NH63 302 aa14.22□□□□□ -0.13
SNRPA1-203ENST00000540017 C4orf3Q8WVX3 66 aa14.22□□□□□ -0.13
SNRPA1-203ENST00000540017 UBE2E2Q96LR5 201 aa14.22□□□□□ -0.13
SNRPA1-203ENST00000540017 OR5B12Q96R08 314 aa14.22□□□□□ -0.13
SNRPA1-203ENST00000540017 TNCP24821 2201 aa14.22□□□□□ -0.13
SNRPA1-203ENST00000540017 I3L521 148 aa14.21□□□□□ -0.13
SNRPA1-203ENST00000540017 PGLYRP1O75594 196 aaPredicted RBP14.21□□□□□ -0.13
SNRPA1-203ENST00000540017 APELAP0DMC3 54 aa14.21□□□□□ -0.13
SNRPA1-203ENST00000540017 TSPAN5P62079 268 aa14.21□□□□□ -0.13
SNRPA1-203ENST00000540017 TNXAQ16473 311 aa14.21□□□□□ -0.13
SNRPA1-203ENST00000540017 VAX1Q5SQQ9 334 aa14.21□□□□□ -0.13
SNRPA1-203ENST00000540017 C10orf55Q5SWW7 151 aa14.21□□□□□ -0.13
SNRPA1-203ENST00000540017 KPRPQ5T749 579 aaPredicted RBP14.21□□□□□ -0.13
SNRPA1-203ENST00000540017 PUSL1Q8N0Z8 303 aaKnown RBP14.21□□□□□ -0.13
SNRPA1-203ENST00000540017 OR5T1Q8NG75 326 aa14.21□□□□□ -0.13
SNRPA1-203ENST00000540017 DIRAS2Q96HU8 199 aa14.21□□□□□ -0.13
SNRPA1-203ENST00000540017 MS4A10Q96PG2 267 aa14.21□□□□□ -0.13
SNRPA1-203ENST00000540017 TINAGL1Q9GZM7 467 aaPredicted RBP14.21□□□□□ -0.13
SNRPA1-203ENST00000540017 C6orf62Q9GZU0 229 aaPredicted RBP14.21□□□□□ -0.13
SNRPA1-203ENST00000540017 NXF2Q9GZY0 626 aaKnown RBP14.21□□□□□ -0.13
SNRPA1-203ENST00000540017 MSGN1A6NI15 193 aa14.2□□□□□ -0.14
SNRPA1-203ENST00000540017 WIPF1O43516 503 aa14.2□□□□□ -0.14
SNRPA1-203ENST00000540017 CD3DP04234 171 aa14.2□□□□□ -0.14
SNRPA1-203ENST00000540017 RLN1P04808 185 aa14.2□□□□□ -0.14
SNRPA1-203ENST00000540017 KIR2DS2P43631 304 aa14.2□□□□□ -0.14
SNRPA1-203ENST00000540017 AADACL3Q5VUY0 350 aa14.2□□□□□ -0.14
SNRPA1-203ENST00000540017 SSX9Q7RTT3 188 aa14.2□□□□□ -0.14
SNRPA1-203ENST00000540017 OR4D10Q8NGI6 311 aa14.2□□□□□ -0.14
SNRPA1-203ENST00000540017 OR5M8Q8NGP6 311 aa14.2□□□□□ -0.14
SNRPA1-203ENST00000540017 FCAMRQ8WWV6 532 aa14.2□□□□□ -0.14
SNRPA1-203ENST00000540017 RHOVQ96L33 236 aa14.2□□□□□ -0.14
SNRPA1-203ENST00000540017 ALX4Q9H161 411 aaPredicted RBP14.2□□□□□ -0.14
SNRPA1-203ENST00000540017 VSIG4Q9Y279 399 aa14.2□□□□□ -0.14
SNRPA1-203ENST00000540017 CCDC160A6NGH7 325 aa14.19□□□□□ -0.14
SNRPA1-203ENST00000540017 GABARAPH6UMI1 98 aa14.19□□□□□ -0.14
SNRPA1-203ENST00000540017 RBFOX2O43251 390 aaKnown RBP eCLIP14.19□□□□□ -0.14
SNRPA1-203ENST00000540017 KBTBD11O94819 623 aa14.19□□□□□ -0.14
SNRPA1-203ENST00000540017 CATR1Q13166 79 aa14.19□□□□□ -0.14
SNRPA1-203ENST00000540017 TMEM167AQ8TBQ9 72 aa14.19□□□□□ -0.14
SNRPA1-203ENST00000540017 C15orf40Q8WUR7 153 aa14.19□□□□□ -0.14
SNRPA1-203ENST00000540017 SRSF12Q8WXF0 261 aaKnown RBP14.19□□□□□ -0.14
SNRPA1-203ENST00000540017 GPR31O00270 319 aa14.18□□□□□ -0.14
SNRPA1-203ENST00000540017 OR2A4O95047 310 aa14.18□□□□□ -0.14
SNRPA1-203ENST00000540017 HRASP01112 189 aa14.18□□□□□ -0.14
SNRPA1-203ENST00000540017 PRB2P02812 416 aaPredicted RBP14.18□□□□□ -0.14
SNRPA1-203ENST00000540017 TNFSF8P32971 234 aa14.18□□□□□ -0.14
SNRPA1-203ENST00000540017 RUNX1Q01196 453 aa14.18□□□□□ -0.14
SNRPA1-203ENST00000540017 FHL3Q13643 280 aa14.18□□□□□ -0.14
SNRPA1-203ENST00000540017 IL18Q14116 193 aa14.18□□□□□ -0.14
SNRPA1-203ENST00000540017 RNASE10Q5GAN6 216 aaKnown RBP14.18□□□□□ -0.14
SNRPA1-203ENST00000540017 PYHIN1Q6K0P9 492 aa14.18□□□□□ -0.14
SNRPA1-203ENST00000540017 MMD2Q8IY49 270 aa14.18□□□□□ -0.14
SNRPA1-203ENST00000540017 OR11H1Q8NG94 326 aa14.18□□□□□ -0.14
SNRPA1-203ENST00000540017 MCFD2Q8NI22 146 aa14.18□□□□□ -0.14
SNRPA1-203ENST00000540017 BORCS5Q969J3 196 aa14.18□□□□□ -0.14
SNRPA1-203ENST00000540017 RCC1LQ96I51 464 aaKnown RBP14.18□□□□□ -0.14
SNRPA1-203ENST00000540017 OR2A7Q96R45 310 aa14.18□□□□□ -0.14
SNRPA1-203ENST00000540017 RSRP1Q9BUV0 290 aa14.18□□□□□ -0.14
SNRPA1-203ENST00000540017 A0A1B0GW64 132 aa14.17□□□□□ -0.14
SNRPA1-203ENST00000540017 E7EUB6 86 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms