RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 PDE6DO43924 150 aa8.48□□□□□ -1.05
TRAF1-202ENST00000540010 MFAP2P55001 183 aa8.48□□□□□ -1.05
TRAF1-202ENST00000540010 Q56UQ5 140 aa8.48□□□□□ -1.05
TRAF1-202ENST00000540010 TEPPQ6URK8 271 aa8.48□□□□□ -1.05
TRAF1-202ENST00000540010 WDYHV1Q96HA8 205 aa8.48□□□□□ -1.05
TRAF1-202ENST00000540010 RCC1LQ96I51 464 aaKnown RBP8.48□□□□□ -1.05
TRAF1-202ENST00000540010 NDUFB3O43676 98 aa8.47□□□□□ -1.05
TRAF1-202ENST00000540010 CA11O75493 328 aa8.47□□□□□ -1.05
TRAF1-202ENST00000540010 CLDN14O95500 239 aa8.47□□□□□ -1.05
TRAF1-202ENST00000540010 TNFRSF1AP19438 455 aa8.47□□□□□ -1.05
TRAF1-202ENST00000540010 HGFACQ04756 655 aa8.47□□□□□ -1.05
TRAF1-202ENST00000540010 VMA21Q3ZAQ7 101 aa8.47□□□□□ -1.05
TRAF1-202ENST00000540010 OR1B1Q8NGR6 318 aa8.47□□□□□ -1.05
TRAF1-202ENST00000540010 NUDT16L1Q9BRJ7 211 aaKnown RBP8.47□□□□□ -1.05
TRAF1-202ENST00000540010 PXMP4Q9Y6I8 212 aa8.47□□□□□ -1.05
TRAF1-202ENST00000540010 A0A0A6YYD4 124 aa8.47□□□□□ -1.05
TRAF1-202ENST00000540010 A0A1W2PRD5 423 aa8.47□□□□□ -1.05
TRAF1-202ENST00000540010 A0A1W2PRF3 423 aa8.47□□□□□ -1.05
TRAF1-202ENST00000540010 A0A1W2PRM7 423 aa8.47□□□□□ -1.05
TRAF1-202ENST00000540010 RAB7AP51149 207 aa8.47□□□□□ -1.05
TRAF1-202ENST00000540010 ZNF137PP52743 207 aa8.47□□□□□ -1.05
TRAF1-202ENST00000540010 CCL20P78556 96 aa8.47□□□□□ -1.05
TRAF1-202ENST00000540010 VKORC1L1Q8N0U8 176 aa8.47□□□□□ -1.05
TRAF1-202ENST00000540010 GALNT14Q96FL9 552 aa8.47□□□□□ -1.05
TRAF1-202ENST00000540010 BET1LQ9NYM9 111 aa8.47□□□□□ -1.05
TRAF1-202ENST00000540010 DMRT1Q9Y5R6 373 aa8.47□□□□□ -1.05
TRAF1-202ENST00000540010 FAM157AC9JC47 383 aa8.47□□□□□ -1.05
TRAF1-202ENST00000540010 DIRC3C9JPN6 131 aa8.47□□□□□ -1.05
TRAF1-202ENST00000540010 J3QR06 171 aa8.47□□□□□ -1.05
TRAF1-202ENST00000540010 PLAUP00749 431 aa8.47□□□□□ -1.05
TRAF1-202ENST00000540010 WT1P19544 449 aaPredicted RBP8.47□□□□□ -1.05
TRAF1-202ENST00000540010 COX7A1P24310 79 aa8.47□□□□□ -1.05
TRAF1-202ENST00000540010 TCTAP57738 103 aa8.47□□□□□ -1.05
TRAF1-202ENST00000540010 NHLH1Q02575 133 aa8.47□□□□□ -1.05
TRAF1-202ENST00000540010 ARL16Q0P5N6 197 aa8.47□□□□□ -1.05
TRAF1-202ENST00000540010 OR8I2Q8N0Y5 310 aa8.47□□□□□ -1.05
TRAF1-202ENST00000540010 TMEM167BQ9NRX6 74 aa8.47□□□□□ -1.05
TRAF1-202ENST00000540010 MKRN2OSH3BPM6 223 aa8.46□□□□□ -1.05
TRAF1-202ENST00000540010 SRP19P09132 144 aaKnown RBP8.46□□□□□ -1.05
TRAF1-202ENST00000540010 OR5AL1P0C617 328 aa8.46□□□□□ -1.05
TRAF1-202ENST00000540010 AGAP20933 346 aa8.46□□□□□ -1.05
TRAF1-202ENST00000540010 SPCS3P61009 180 aa8.46□□□□□ -1.05
TRAF1-202ENST00000540010 COL10A1Q03692 680 aa8.46□□□□□ -1.05
TRAF1-202ENST00000540010 WDR73Q6P4I2 378 aa8.46□□□□□ -1.05
TRAF1-202ENST00000540010 ABHD12Q8N2K0 398 aa8.46□□□□□ -1.05
TRAF1-202ENST00000540010 OR2J3O76001 311 aa8.46□□□□□ -1.06
TRAF1-202ENST00000540010 CXorf1O96002 111 aa8.46□□□□□ -1.06
TRAF1-202ENST00000540010 Q8WTZ3 238 aa8.46□□□□□ -1.06
TRAF1-202ENST00000540010 LEAP2Q969E1 77 aa8.46□□□□□ -1.06
TRAF1-202ENST00000540010 SGK494Q96LW2 274 aa8.46□□□□□ -1.06
TRAF1-202ENST00000540010 NPVFQ9HCQ7 196 aa8.46□□□□□ -1.06
TRAF1-202ENST00000540010 RFNGQ9Y644 331 aa8.46□□□□□ -1.06
TRAF1-202ENST00000540010 USF3Q68DE3 2245 aa8.46□□□□□ -1.06
TRAF1-202ENST00000540010 FGF16O43320 207 aa8.46□□□□□ -1.06
TRAF1-202ENST00000540010 S1PR2O95136 353 aa8.46□□□□□ -1.06
TRAF1-202ENST00000540010 TNFRSF9Q07011 255 aa8.46□□□□□ -1.06
TRAF1-202ENST00000540010 FOXC1Q12948 553 aa8.46□□□□□ -1.06
TRAF1-202ENST00000540010 LRRC10Q5BKY1 277 aa8.46□□□□□ -1.06
TRAF1-202ENST00000540010 FLYWCH2Q96CP2 140 aaKnown RBP8.46□□□□□ -1.06
TRAF1-202ENST00000540010 WASHC3Q9Y3C0 194 aa8.46□□□□□ -1.06
TRAF1-202ENST00000540010 PCSK5Q92824 1860 aa8.46□□□□□ -1.06
TRAF1-202ENST00000540010 hADV38S2A0JD32 116 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 TCF21O43680 179 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 RHBDL1O75783 438 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 IGHV3-48P01763 117 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 LYZP61626 148 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 QRFPP83859 136 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 FXYD3Q14802 87 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 ELOBQ15370 118 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 NRN1LQ496H8 165 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 FAM162BQ5T6X4 162 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 DRAM1Q8N682 238 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 OR2T6Q8NHC8 308 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 GMPPAQ96IJ6 420 aaPredicted RBP8.45□□□□□ -1.06
TRAF1-202ENST00000540010 HARBI1Q96MB7 349 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 ZDHHC8Q9ULC8 765 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 NCKAP5O14513 1909 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 MUC6Q6W4X9 2439 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 F8VVB4 439 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 F8VWA3 439 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 RNF224P0DH78 156 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 PRDX2P32119 198 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 SUPT4H1P63272 117 aaKnown RBP8.45□□□□□ -1.06
TRAF1-202ENST00000540010 OR4X1Q8NH49 305 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 MARS2Q96GW9 593 aaKnown RBP8.45□□□□□ -1.06
TRAF1-202ENST00000540010 ATG101Q9BSB4 218 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 NCBP2LA6PVI3 153 aaKnown RBP8.45□□□□□ -1.06
TRAF1-202ENST00000540010 UCP2P55851 309 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 UCP3P55916 312 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 LYPD6Q86Y78 171 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 NHLRC2Q8NBF2 726 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 FBLN5Q9UBX5 448 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 NAGKQ9UJ70 344 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 TRGV8A0A0C4DH27 118 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 COL8A1P27658 744 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 CCL8P80075 99 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 TNXAQ16473 311 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 PDPNQ86YL7 162 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 ZBTB34Q8NCN2 500 aa8.45□□□□□ -1.06
TRAF1-202ENST00000540010 PRDM14Q9GZV8 571 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms