RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 YPEL2Q96QA6 119 aa11.03□□□□□ -0.64
UBE3B-209ENST00000539584 ZDHHC11Q9H8X9 412 aa11.03□□□□□ -0.64
UBE3B-209ENST00000539584 TRBV9A0A0B4J1U6 114 aa11.02□□□□□ -0.64
UBE3B-209ENST00000539584 KIR2DL5BA0A0G2JN68 375 aa11.02□□□□□ -0.64
UBE3B-209ENST00000539584 KIR2DL5BA0A0G2JPC4 375 aa11.02□□□□□ -0.64
UBE3B-209ENST00000539584 A0A1B0GWJ7 208 aa11.02□□□□□ -0.64
UBE3B-209ENST00000539584 A8MXE2 369 aa11.02□□□□□ -0.64
UBE3B-209ENST00000539584 HOXC12P31275 282 aa11.02□□□□□ -0.64
UBE3B-209ENST00000539584 TIMP3P35625 211 aa11.02□□□□□ -0.64
UBE3B-209ENST00000539584 VDAC2P45880 294 aaPredicted RBP11.02□□□□□ -0.64
UBE3B-209ENST00000539584 CEBPDP49716 269 aaPredicted RBP11.02□□□□□ -0.64
UBE3B-209ENST00000539584 RANP62826 216 aaKnown RBP11.02□□□□□ -0.64
UBE3B-209ENST00000539584 RAB31Q13636 194 aa11.02□□□□□ -0.64
UBE3B-209ENST00000539584 CLEC12BQ2HXU8 276 aa11.02□□□□□ -0.64
UBE3B-209ENST00000539584 ALKBH6Q3KRA9 238 aa11.02□□□□□ -0.64
UBE3B-209ENST00000539584 PRAMEF5Q5TYX0 476 aa11.02□□□□□ -0.64
UBE3B-209ENST00000539584 PRAMEF6Q5VXH4 476 aa11.02□□□□□ -0.64
UBE3B-209ENST00000539584 MYPOPQ86VE0 399 aaPredicted RBP11.02□□□□□ -0.64
UBE3B-209ENST00000539584 KIR2DL5AQ8N109 375 aa11.02□□□□□ -0.64
UBE3B-209ENST00000539584 C11orf52Q96A22 123 aa11.02□□□□□ -0.64
UBE3B-209ENST00000539584 PSG11Q9UQ72 335 aa11.02□□□□□ -0.64
UBE3B-209ENST00000539584 ARHGAP21Q5T5U3 1957 aa11.02□□□□□ -0.64
UBE3B-209ENST00000539584 TRAV38-1A0A0B4J264 116 aa11.02□□□□□ -0.65
UBE3B-209ENST00000539584 PRSS46E5RG02 174 aa11.02□□□□□ -0.65
UBE3B-209ENST00000539584 M0R143 59 aa11.02□□□□□ -0.65
UBE3B-209ENST00000539584 OR9G9P0C7N8 305 aa11.02□□□□□ -0.65
UBE3B-209ENST00000539584 EDDM3BP56851 147 aa11.02□□□□□ -0.65
UBE3B-209ENST00000539584 COX19Q49B96 90 aa11.02□□□□□ -0.65
UBE3B-209ENST00000539584 TEX38Q6PEX7 206 aa11.02□□□□□ -0.65
UBE3B-209ENST00000539584 OR13A1Q8NGR1 328 aa11.02□□□□□ -0.65
UBE3B-209ENST00000539584 MS4A10Q96PG2 267 aa11.02□□□□□ -0.65
UBE3B-209ENST00000539584 UHRF2Q96PU4 802 aa11.02□□□□□ -0.65
UBE3B-209ENST00000539584 NEU1Q99519 415 aa11.02□□□□□ -0.65
UBE3B-209ENST00000539584 NCOR1P1Q9H4R4 102 aa11.02□□□□□ -0.65
UBE3B-209ENST00000539584 HEYLQ9NQ87 328 aaPredicted RBP11.02□□□□□ -0.65
UBE3B-209ENST00000539584 IL36BQ9NZH7 164 aa11.02□□□□□ -0.65
UBE3B-209ENST00000539584 FOXJ2Q9P0K8 574 aa11.02□□□□□ -0.65
UBE3B-209ENST00000539584 NAGKQ9UJ70 344 aa11.02□□□□□ -0.65
UBE3B-209ENST00000539584 LSM4Q9Y4Z0 139 aaKnown RBP11.02□□□□□ -0.65
UBE3B-209ENST00000539584 C19orf67A6NJJ6 358 aa11.01□□□□□ -0.65
UBE3B-209ENST00000539584 GFRA3O60609 400 aa11.01□□□□□ -0.65
UBE3B-209ENST00000539584 SCGB1D1O95968 90 aa11.01□□□□□ -0.65
UBE3B-209ENST00000539584 ARL14EPLP0DKL9 152 aa11.01□□□□□ -0.65
UBE3B-209ENST00000539584 AREGP15514 252 aa11.01□□□□□ -0.65
UBE3B-209ENST00000539584 SSTR5P35346 364 aa11.01□□□□□ -0.65
UBE3B-209ENST00000539584 MPV17P39210 176 aa11.01□□□□□ -0.65
UBE3B-209ENST00000539584 RHOBP62745 196 aa11.01□□□□□ -0.65
UBE3B-209ENST00000539584 ESPL1Q14674 2120 aa11.01□□□□□ -0.65
UBE3B-209ENST00000539584 FAM214BQ7L5A3 538 aa11.01□□□□□ -0.65
UBE3B-209ENST00000539584 C1orf210Q8IVY1 113 aa11.01□□□□□ -0.65
UBE3B-209ENST00000539584 SFXN3Q9BWM7 321 aa11.01□□□□□ -0.65
UBE3B-209ENST00000539584 GGTLC1Q9BX51 225 aa11.01□□□□□ -0.65
UBE3B-209ENST00000539584 SPRR3Q9UBC9 169 aa11.01□□□□□ -0.65
UBE3B-209ENST00000539584 WNT9BO14905 357 aa11.01□□□□□ -0.65
UBE3B-209ENST00000539584 TCAPO15273 167 aa11.01□□□□□ -0.65
UBE3B-209ENST00000539584 CRYAAP02489 173 aa11.01□□□□□ -0.65
UBE3B-209ENST00000539584 C1QTNF9P0C862 333 aa11.01□□□□□ -0.65
UBE3B-209ENST00000539584 RPL29P47914 159 aaKnown RBP11.01□□□□□ -0.65
UBE3B-209ENST00000539584 TPPP2P59282 170 aa11.01□□□□□ -0.65
UBE3B-209ENST00000539584 UBE2G2P60604 165 aa11.01□□□□□ -0.65
UBE3B-209ENST00000539584 ZNF718Q3SXZ3 478 aa11.01□□□□□ -0.65
UBE3B-209ENST00000539584 MORN2Q502X0 79 aa11.01□□□□□ -0.65
UBE3B-209ENST00000539584 MBNL2Q5VZF2 373 aaKnown RBP11.01□□□□□ -0.65
UBE3B-209ENST00000539584 TMEM105Q8N8V8 129 aa11.01□□□□□ -0.65
UBE3B-209ENST00000539584 OR5T1Q8NG75 326 aa11.01□□□□□ -0.65
UBE3B-209ENST00000539584 CMTM2Q8TAZ6 248 aa11.01□□□□□ -0.65
UBE3B-209ENST00000539584 ZCCHC14Q8WYQ9 949 aaKnown RBP11.01□□□□□ -0.65
UBE3B-209ENST00000539584 MGST2Q99735 147 aa11.01□□□□□ -0.65
UBE3B-209ENST00000539584 DEFB127Q9H1M4 99 aa11.01□□□□□ -0.65
UBE3B-209ENST00000539584 MED12LQ86YW9 2145 aa11□□□□□ -0.65
UBE3B-209ENST00000539584 TRGV10A0A0A0MS01 117 aa11□□□□□ -0.65
UBE3B-209ENST00000539584 TIMM8AO60220 97 aaPredicted RBP11□□□□□ -0.65
UBE3B-209ENST00000539584 FCGR3BO75015 233 aa11□□□□□ -0.65
UBE3B-209ENST00000539584 CFHR2P36980 270 aa11□□□□□ -0.65
UBE3B-209ENST00000539584 RAB7AP51149 207 aa11□□□□□ -0.65
UBE3B-209ENST00000539584 ATP5IP56385 69 aaPredicted RBP11□□□□□ -0.65
UBE3B-209ENST00000539584 ZNF124Q15973 351 aa11□□□□□ -0.65
UBE3B-209ENST00000539584 TEPPQ6URK8 271 aa11□□□□□ -0.65
UBE3B-209ENST00000539584 Q6ZR03 302 aa11□□□□□ -0.65
UBE3B-209ENST00000539584 ZNF826PQ6ZT77 177 aa11□□□□□ -0.65
UBE3B-209ENST00000539584 TGIF2LXQ8IUE1 241 aa11□□□□□ -0.65
UBE3B-209ENST00000539584 ZNF436-AS1Q8NC38 126 aaPredicted RBP11□□□□□ -0.65
UBE3B-209ENST00000539584 S1PR3Q99500 378 aa11□□□□□ -0.65
UBE3B-209ENST00000539584 OPN3Q9H1Y3 402 aaPredicted RBP11□□□□□ -0.65
UBE3B-209ENST00000539584 CLCF1Q9UBD9 225 aa11□□□□□ -0.65
UBE3B-209ENST00000539584 KIAA2026Q5HYC2 2103 aa11□□□□□ -0.65
UBE3B-209ENST00000539584 F2RL2O00254 374 aa10.99□□□□□ -0.65
UBE3B-209ENST00000539584 MGST3O14880 152 aa10.99□□□□□ -0.65
UBE3B-209ENST00000539584 OR4A8P0C604 315 aa10.99□□□□□ -0.65
UBE3B-209ENST00000539584 GCH1P30793 250 aa10.99□□□□□ -0.65
UBE3B-209ENST00000539584 PRDX2P32119 198 aa10.99□□□□□ -0.65
UBE3B-209ENST00000539584 RELBQ01201 579 aa10.99□□□□□ -0.65
UBE3B-209ENST00000539584 DERL1Q9BUN8 251 aa10.99□□□□□ -0.65
UBE3B-209ENST00000539584 PRO3102Q9H379 93 aa10.99□□□□□ -0.65
UBE3B-209ENST00000539584 MS4A5Q9H3V2 200 aa10.99□□□□□ -0.65
UBE3B-209ENST00000539584 TMEM106BQ9NUM4 274 aa10.99□□□□□ -0.65
UBE3B-209ENST00000539584 GNG12Q9UBI6 72 aa10.99□□□□□ -0.65
UBE3B-209ENST00000539584 SLC25A10Q9UBX3 287 aaPredicted RBP10.99□□□□□ -0.65
UBE3B-209ENST00000539584 SELLP14151 372 aa10.99□□□□□ -0.65
UBE3B-209ENST00000539584 GCHFRP30047 84 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms