RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 MTCL1Q9Y4B5 1905 aaKnown RBP12.37□□□□□ -0.43
CACNB1-206ENST00000539338 PQLC2Q6ZP29 291 aa12.37□□□□□ -0.43
CACNB1-206ENST00000539338 LILRB1Q8NHL6 650 aaPredicted RBP12.37□□□□□ -0.43
CACNB1-206ENST00000539338 PRR32B1ATL7 298 aa12.37□□□□□ -0.43
CACNB1-206ENST00000539338 NRN1LQ496H8 165 aa12.37□□□□□ -0.43
CACNB1-206ENST00000539338 MARVELD3Q96A59 401 aa12.37□□□□□ -0.43
CACNB1-206ENST00000539338 METTL1Q9UBP6 276 aaKnown RBP12.37□□□□□ -0.43
CACNB1-206ENST00000539338 RPL13AP40429 203 aaKnown RBP12.37□□□□□ -0.43
CACNB1-206ENST00000539338 RND2P52198 227 aa12.37□□□□□ -0.43
CACNB1-206ENST00000539338 FXYD3Q14802 87 aa12.37□□□□□ -0.43
CACNB1-206ENST00000539338 HIST1H2BAQ96A08 127 aa12.37□□□□□ -0.43
CACNB1-206ENST00000539338 TIMP4Q99727 224 aa12.37□□□□□ -0.43
CACNB1-206ENST00000539338 IDI2-AS1Q9NZ38 188 aa12.37□□□□□ -0.43
CACNB1-206ENST00000539338 A0A0G2JMM0 328 aa12.36□□□□□ -0.43
CACNB1-206ENST00000539338 A0A1W2PPB8 328 aa12.36□□□□□ -0.43
CACNB1-206ENST00000539338 A0A1W2PRS3 328 aa12.36□□□□□ -0.43
CACNB1-206ENST00000539338 KIR3DP1A8MWS1 328 aa12.36□□□□□ -0.43
CACNB1-206ENST00000539338 SLC25A17O43808 307 aa12.36□□□□□ -0.43
CACNB1-206ENST00000539338 MGPP08493 103 aa12.36□□□□□ -0.43
CACNB1-206ENST00000539338 CALHM1Q8IU99 346 aa12.36□□□□□ -0.43
CACNB1-206ENST00000539338 GPR61Q9BZJ8 451 aa12.36□□□□□ -0.43
CACNB1-206ENST00000539338 hCG_38984A0A1B0GV85 526 aa12.36□□□□□ -0.43
CACNB1-206ENST00000539338 SYNGR3O43761 229 aa12.36□□□□□ -0.43
CACNB1-206ENST00000539338 HSPE1P61604 102 aaKnown RBP12.36□□□□□ -0.43
CACNB1-206ENST00000539338 LSM10Q969L4 123 aaKnown RBP12.36□□□□□ -0.43
CACNB1-206ENST00000539338 SLC25A53Q5H9E4 307 aa12.36□□□□□ -0.43
CACNB1-206ENST00000539338 WFDC3Q8IUB2 231 aa12.36□□□□□ -0.43
CACNB1-206ENST00000539338 CRIPAKQ8N1N5 446 aa12.36□□□□□ -0.43
CACNB1-206ENST00000539338 OR1P1Q8NH06 330 aa12.36□□□□□ -0.43
CACNB1-206ENST00000539338 RTBDNQ9BSG5 229 aaPredicted RBP12.36□□□□□ -0.43
CACNB1-206ENST00000539338 DICER1Q9UPY3 1922 aaKnown RBP12.36□□□□□ -0.43
CACNB1-206ENST00000539338 GVINP1Q7Z2Y8 2422 aa12.36□□□□□ -0.43
CACNB1-206ENST00000539338 ABCA7Q8IZY2 2146 aa12.36□□□□□ -0.43
CACNB1-206ENST00000539338 PGPA6NDG6 321 aa12.36□□□□□ -0.43
CACNB1-206ENST00000539338 HSPB8Q9UJY1 196 aa12.36□□□□□ -0.43
CACNB1-206ENST00000539338 LYPD3O95274 346 aa12.35□□□□□ -0.43
CACNB1-206ENST00000539338 TGFAP01135 160 aa12.35□□□□□ -0.43
CACNB1-206ENST00000539338 EGR1P18146 543 aa12.35□□□□□ -0.43
CACNB1-206ENST00000539338 SMIM8Q96KF7 97 aa12.35□□□□□ -0.43
CACNB1-206ENST00000539338 MRPL37Q9BZE1 423 aaKnown RBP12.35□□□□□ -0.43
CACNB1-206ENST00000539338 A0A1B0GTI1 187 aa12.35□□□□□ -0.43
CACNB1-206ENST00000539338 IGHV3-48P01763 117 aa12.35□□□□□ -0.43
CACNB1-206ENST00000539338 RPLP1P05386 114 aaKnown RBP12.35□□□□□ -0.43
CACNB1-206ENST00000539338 ERVFRD-1P60508 538 aa12.35□□□□□ -0.43
CACNB1-206ENST00000539338 ZNF385CQ66K41 422 aaPredicted RBP12.35□□□□□ -0.43
CACNB1-206ENST00000539338 LINC01560Q8TB33 94 aa12.35□□□□□ -0.43
CACNB1-206ENST00000539338 RTN4RQ9BZR6 473 aa12.35□□□□□ -0.43
CACNB1-206ENST00000539338 DCAF16Q9NXF7 216 aa12.35□□□□□ -0.43
CACNB1-206ENST00000539338 RABAC1Q9UI14 185 aa12.35□□□□□ -0.43
CACNB1-206ENST00000539338 TCF19Q9Y242 345 aa12.35□□□□□ -0.43
CACNB1-206ENST00000539338 MC5RP33032 325 aa12.35□□□□□ -0.43
CACNB1-206ENST00000539338 CD81P60033 236 aa12.35□□□□□ -0.43
CACNB1-206ENST00000539338 WFIKKN1Q96NZ8 548 aa12.35□□□□□ -0.43
CACNB1-206ENST00000539338 TM2D1Q9BX74 207 aa12.35□□□□□ -0.43
CACNB1-206ENST00000539338 TRAV14DV4A0A0A6YYC5 116 aa12.35□□□□□ -0.43
CACNB1-206ENST00000539338 M0QZK8 103 aa12.35□□□□□ -0.43
CACNB1-206ENST00000539338 GGCTO75223 188 aaKnown RBP12.35□□□□□ -0.43
CACNB1-206ENST00000539338 REG1AP05451 166 aa12.35□□□□□ -0.43
CACNB1-206ENST00000539338 TCF15Q12870 199 aa12.35□□□□□ -0.43
CACNB1-206ENST00000539338 FLVCR1-AS1Q8TAF5 88 aa12.35□□□□□ -0.43
CACNB1-206ENST00000539338 QTRT1Q9BXR0 403 aaKnown RBP12.35□□□□□ -0.43
CACNB1-206ENST00000539338 PARLQ9H300 379 aa12.35□□□□□ -0.43
CACNB1-206ENST00000539338 SDK2Q58EX2 2172 aa12.35□□□□□ -0.43
CACNB1-206ENST00000539338 RNF222A6NCQ9 220 aa12.35□□□□□ -0.43
CACNB1-206ENST00000539338 NDUFA2O43678 99 aa12.35□□□□□ -0.43
CACNB1-206ENST00000539338 PTGDSP41222 190 aa12.35□□□□□ -0.43
CACNB1-206ENST00000539338 MUC15Q8N387 334 aa12.35□□□□□ -0.43
CACNB1-206ENST00000539338 SGK494Q96LW2 274 aa12.35□□□□□ -0.43
CACNB1-206ENST00000539338 MDC1Q14676 2089 aaKnown RBP12.34□□□□□ -0.43
CACNB1-206ENST00000539338 A8MWL6 223 aa12.34□□□□□ -0.43
CACNB1-206ENST00000539338 ZNF735P0CB33 412 aa12.34□□□□□ -0.43
CACNB1-206ENST00000539338 SCGB1D4Q6XE38 83 aa12.34□□□□□ -0.43
CACNB1-206ENST00000539338 EIF4E3Q8N5X7 224 aaKnown RBP12.34□□□□□ -0.43
CACNB1-206ENST00000539338 ZNRF1Q8ND25 227 aa12.34□□□□□ -0.43
CACNB1-206ENST00000539338 JPT1Q9UK76 154 aa12.34□□□□□ -0.43
CACNB1-206ENST00000539338 CACNA1EQ15878 2313 aa12.34□□□□□ -0.43
CACNB1-206ENST00000539338 PROB1E7EW31 1015 aa12.34□□□□□ -0.43
CACNB1-206ENST00000539338 H3BTX0 84 aa12.34□□□□□ -0.43
CACNB1-206ENST00000539338 IGFBP3P17936 291 aaPredicted RBP12.34□□□□□ -0.43
CACNB1-206ENST00000539338 AGAP20933 346 aa12.34□□□□□ -0.43
CACNB1-206ENST00000539338 CRYBB3P26998 211 aa12.34□□□□□ -0.43
CACNB1-206ENST00000539338 PAFAH1B2P68402 229 aa12.34□□□□□ -0.43
CACNB1-206ENST00000539338 DCTN5Q9BTE1 182 aa12.34□□□□□ -0.43
CACNB1-206ENST00000539338 ZNF430Q9H8G1 570 aaPredicted RBP12.34□□□□□ -0.43
CACNB1-206ENST00000539338 RPRMQ9NS64 109 aa12.34□□□□□ -0.43
CACNB1-206ENST00000539338 ZDHHC8Q9ULC8 765 aa12.34□□□□□ -0.43
CACNB1-206ENST00000539338 CD99P14209 185 aa12.34□□□□□ -0.43
CACNB1-206ENST00000539338 TXNDC17Q9BRA2 123 aa12.34□□□□□ -0.43
CACNB1-206ENST00000539338 MRPL18Q9H0U6 180 aaKnown RBP12.34□□□□□ -0.43
CACNB1-206ENST00000539338 ZNF703Q9H7S9 590 aaPredicted RBP12.34□□□□□ -0.43
CACNB1-206ENST00000539338 IFITM10A6NMD0 228 aa12.34□□□□□ -0.43
CACNB1-206ENST00000539338 SELENOTP62341 195 aa12.34□□□□□ -0.43
CACNB1-206ENST00000539338 TRGC1P0CF51 173 aa12.33□□□□□ -0.44
CACNB1-206ENST00000539338 RPL24P83731 157 aaKnown RBP12.33□□□□□ -0.44
CACNB1-206ENST00000539338 RPL39P5Q59GN2 51 aa12.33□□□□□ -0.44
CACNB1-206ENST00000539338 LINC00518Q8N0U6 118 aa12.33□□□□□ -0.44
CACNB1-206ENST00000539338 LRRC75BQ2VPJ9 315 aa12.33□□□□□ -0.44
CACNB1-206ENST00000539338 SPANXN1Q5VSR9 72 aa12.33□□□□□ -0.44
CACNB1-206ENST00000539338 MMD2Q8IY49 270 aa12.33□□□□□ -0.44
CACNB1-206ENST00000539338 TWIST1Q15672 202 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms