RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 TIMM23O14925 209 aa12.46□□□□□ -0.41
VAMP1-207ENST00000539047 SNAPC5O75971 98 aa12.46□□□□□ -0.41
VAMP1-207ENST00000539047 SCGB1D2O95969 90 aa12.46□□□□□ -0.41
VAMP1-207ENST00000539047 IGKV1-39P01597 117 aa12.46□□□□□ -0.41
VAMP1-207ENST00000539047 IGKV1D-39P04432 117 aa12.46□□□□□ -0.41
VAMP1-207ENST00000539047 CD1BP29016 333 aa12.46□□□□□ -0.41
VAMP1-207ENST00000539047 LINC00205P59089 165 aa12.46□□□□□ -0.41
VAMP1-207ENST00000539047 S100A10P60903 97 aa12.46□□□□□ -0.41
VAMP1-207ENST00000539047 SRSF4Q08170 494 aaKnown RBP12.46□□□□□ -0.41
VAMP1-207ENST00000539047 DIAPH2-AS1Q14236 149 aa12.46□□□□□ -0.41
VAMP1-207ENST00000539047 VMA21Q3ZAQ7 101 aa12.46□□□□□ -0.41
VAMP1-207ENST00000539047 TMEM177Q53S58 311 aa12.46□□□□□ -0.41
VAMP1-207ENST00000539047 NMSQ5H8A3 153 aa12.46□□□□□ -0.41
VAMP1-207ENST00000539047 FYTTD1Q96QD9 318 aaKnown RBP12.46□□□□□ -0.41
VAMP1-207ENST00000539047 TSNAXQ99598 290 aaKnown RBP12.46□□□□□ -0.41
VAMP1-207ENST00000539047 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.46□□□□□ -0.41
VAMP1-207ENST00000539047 IGKV1-5P01602 117 aa12.45□□□□□ -0.42
VAMP1-207ENST00000539047 RLN2P04090 185 aa12.45□□□□□ -0.42
VAMP1-207ENST00000539047 LGALS7P47929 136 aa12.45□□□□□ -0.42
VAMP1-207ENST00000539047 HES1Q14469 280 aa12.45□□□□□ -0.42
VAMP1-207ENST00000539047 SSX9Q7RTT3 188 aa12.45□□□□□ -0.42
VAMP1-207ENST00000539047 OR4A16Q8NH70 328 aa12.45□□□□□ -0.42
VAMP1-207ENST00000539047 THAP6Q8TBB0 222 aa12.45□□□□□ -0.42
VAMP1-207ENST00000539047 NANPQ8TBE9 248 aa12.45□□□□□ -0.42
VAMP1-207ENST00000539047 OR10C1Q96KK4 312 aa12.45□□□□□ -0.42
VAMP1-207ENST00000539047 RHOVQ96L33 236 aa12.45□□□□□ -0.42
VAMP1-207ENST00000539047 RNF5Q99942 180 aa12.45□□□□□ -0.42
VAMP1-207ENST00000539047 CACNG5Q9UF02 275 aa12.45□□□□□ -0.42
VAMP1-207ENST00000539047 NF1P21359 2839 aa12.45□□□□□ -0.42
VAMP1-207ENST00000539047 MTORP42345 2549 aa12.44□□□□□ -0.42
VAMP1-207ENST00000539047 IGHV3OR16-10A0A075B7F0 116 aa12.44□□□□□ -0.42
VAMP1-207ENST00000539047 IGHV3-72A0A0B4J1Y9 119 aa12.44□□□□□ -0.42
VAMP1-207ENST00000539047 MPTX1A8MV57 137 aa12.44□□□□□ -0.42
VAMP1-207ENST00000539047 C1QBP02746 253 aa12.44□□□□□ -0.42
VAMP1-207ENST00000539047 FBP1P09467 338 aa12.44□□□□□ -0.42
VAMP1-207ENST00000539047 PVALBP20472 110 aaPredicted RBP12.44□□□□□ -0.42
VAMP1-207ENST00000539047 NKX2-1P43699 371 aaPredicted RBP12.44□□□□□ -0.42
VAMP1-207ENST00000539047 BRWD1-AS2P59051 145 aa12.44□□□□□ -0.42
VAMP1-207ENST00000539047 POU2AF1Q16633 256 aa12.44□□□□□ -0.42
VAMP1-207ENST00000539047 LRRC37A5PQ49AS3 106 aa12.44□□□□□ -0.42
VAMP1-207ENST00000539047 OR2T10Q8NGZ9 312 aa12.44□□□□□ -0.42
VAMP1-207ENST00000539047 PPP1R1CQ8WVI7 109 aa12.44□□□□□ -0.42
VAMP1-207ENST00000539047 GPR146Q96CH1 333 aa12.44□□□□□ -0.42
VAMP1-207ENST00000539047 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.44□□□□□ -0.42
VAMP1-207ENST00000539047 TMEM140Q9NV12 185 aa12.44□□□□□ -0.42
VAMP1-207ENST00000539047 COA4Q9NYJ1 87 aa12.44□□□□□ -0.42
VAMP1-207ENST00000539047 ST8SIA3O43173 380 aa12.43□□□□□ -0.42
VAMP1-207ENST00000539047 MED6O75586 246 aa12.43□□□□□ -0.42
VAMP1-207ENST00000539047 SPDEFO95238 335 aa12.43□□□□□ -0.42
VAMP1-207ENST00000539047 MOSP00540 346 aa12.43□□□□□ -0.42
VAMP1-207ENST00000539047 IGKV1-16P04430 117 aa12.43□□□□□ -0.42
VAMP1-207ENST00000539047 FAM106CPP0CH98 169 aa12.43□□□□□ -0.42
VAMP1-207ENST00000539047 HNF1AP20823 631 aa12.43□□□□□ -0.42
VAMP1-207ENST00000539047 PSMB6P28072 239 aa12.43□□□□□ -0.42
VAMP1-207ENST00000539047 RUSC1-AS1Q66K80 236 aa12.43□□□□□ -0.42
VAMP1-207ENST00000539047 OR4A5Q8NH83 315 aa12.43□□□□□ -0.42
VAMP1-207ENST00000539047 HYLS1Q96M11 299 aa12.43□□□□□ -0.42
VAMP1-207ENST00000539047 CLCC1Q96S66 551 aa12.43□□□□□ -0.42
VAMP1-207ENST00000539047 KIAA1456Q9P272 454 aa12.43□□□□□ -0.42
VAMP1-207ENST00000539047 ITPR3Q14573 2671 aa12.42□□□□□ -0.42
VAMP1-207ENST00000539047 FAM90A26D6RGX4 464 aa12.42□□□□□ -0.42
VAMP1-207ENST00000539047 VENTXO95231 258 aa12.42□□□□□ -0.42
VAMP1-207ENST00000539047 IGKV1D-33P01593 117 aa12.42□□□□□ -0.42
VAMP1-207ENST00000539047 IGKV1-33P01594 117 aa12.42□□□□□ -0.42
VAMP1-207ENST00000539047 IGHV4-38-2P0DP08 117 aa12.42□□□□□ -0.42
VAMP1-207ENST00000539047 NUP62P37198 522 aaPredicted RBP12.42□□□□□ -0.42
VAMP1-207ENST00000539047 EIF2B2P49770 351 aaKnown RBP12.42□□□□□ -0.42
VAMP1-207ENST00000539047 UBE2KP61086 200 aa12.42□□□□□ -0.42
VAMP1-207ENST00000539047 HABP2Q14520 560 aaPredicted RBP12.42□□□□□ -0.42
VAMP1-207ENST00000539047 PLGLAQ15195 96 aa12.42□□□□□ -0.42
VAMP1-207ENST00000539047 OR4A47Q6IF82 309 aa12.42□□□□□ -0.42
VAMP1-207ENST00000539047 BRD3OSQ6XYD6 125 aa12.42□□□□□ -0.42
VAMP1-207ENST00000539047 FOXRED2Q8IWF2 684 aa12.42□□□□□ -0.42
VAMP1-207ENST00000539047 FKBP11Q9NYL4 201 aa12.42□□□□□ -0.42
VAMP1-207ENST00000539047 BET1LQ9NYM9 111 aa12.42□□□□□ -0.42
VAMP1-207ENST00000539047 NUP50Q9UKX7 468 aa12.42□□□□□ -0.42
VAMP1-207ENST00000539047 PRNDQ9UKY0 176 aa12.42□□□□□ -0.42
VAMP1-207ENST00000539047 LSM5Q9Y4Y9 91 aaKnown RBP12.42□□□□□ -0.42
VAMP1-207ENST00000539047 FXYD6-FXYD2A0A087WZ82 144 aa12.41□□□□□ -0.42
VAMP1-207ENST00000539047 A0A0G2JRQ6 117 aa12.41□□□□□ -0.42
VAMP1-207ENST00000539047 L7N2F9 121 aa12.41□□□□□ -0.42
VAMP1-207ENST00000539047 CD5LO43866 347 aa12.41□□□□□ -0.42
VAMP1-207ENST00000539047 KBTBD11O94819 623 aa12.41□□□□□ -0.42
VAMP1-207ENST00000539047 MPC2O95563 127 aa12.41□□□□□ -0.42
VAMP1-207ENST00000539047 SNRNP70P08621 437 aaKnown RBP12.41□□□□□ -0.42
VAMP1-207ENST00000539047 SAA1P0DJI8 122 aaPredicted RBP12.41□□□□□ -0.42
VAMP1-207ENST00000539047 TMEM11P17152 192 aa12.41□□□□□ -0.42
VAMP1-207ENST00000539047 VAMP2P63027 116 aa12.41□□□□□ -0.42
VAMP1-207ENST00000539047 CD300CQ08708 224 aa12.41□□□□□ -0.42
VAMP1-207ENST00000539047 RAB32Q13637 225 aa12.41□□□□□ -0.42
VAMP1-207ENST00000539047 LDLRAD2Q5SZI1 272 aa12.41□□□□□ -0.42
VAMP1-207ENST00000539047 NOXA1Q86UR1 476 aa12.41□□□□□ -0.42
VAMP1-207ENST00000539047 VKORC1L1Q8N0U8 176 aa12.41□□□□□ -0.42
VAMP1-207ENST00000539047 CIARTQ8N365 385 aaPredicted RBP12.41□□□□□ -0.42
VAMP1-207ENST00000539047 OR4D5Q8NGN0 318 aa12.41□□□□□ -0.42
VAMP1-207ENST00000539047 CFHR4Q92496 578 aa12.41□□□□□ -0.42
VAMP1-207ENST00000539047 C1RLQ9NZP8 487 aa12.41□□□□□ -0.42
VAMP1-207ENST00000539047 POMT1Q9Y6A1 747 aa12.41□□□□□ -0.42
VAMP1-207ENST00000539047 A0A0U1RQK1 487 aa12.4□□□□□ -0.42
VAMP1-207ENST00000539047 SMLR1H3BR10 107 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms