RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 ELOA3CA0A087WX78 387 aaPredicted RBP12.11□□□□□ -0.47
CDCA3-207ENST00000538862 TMEM250H0YL14 139 aa12.11□□□□□ -0.47
CDCA3-207ENST00000538862 AQP7O14520 342 aa12.11□□□□□ -0.47
CDCA3-207ENST00000538862 TIMM8AO60220 97 aaPredicted RBP12.11□□□□□ -0.47
CDCA3-207ENST00000538862 TRGC2P03986 189 aa12.11□□□□□ -0.47
CDCA3-207ENST00000538862 KIR2DL2P43627 348 aaPredicted RBP12.11□□□□□ -0.47
CDCA3-207ENST00000538862 CD81P60033 236 aa12.11□□□□□ -0.47
CDCA3-207ENST00000538862 MEF2BQ02080 365 aaPredicted RBP12.11□□□□□ -0.47
CDCA3-207ENST00000538862 COL10A1Q03692 680 aa12.11□□□□□ -0.47
CDCA3-207ENST00000538862 OR2B11Q5JQS5 317 aa12.11□□□□□ -0.47
CDCA3-207ENST00000538862 ACSM6Q6P461 480 aa12.11□□□□□ -0.47
CDCA3-207ENST00000538862 Q6ZR03 302 aa12.11□□□□□ -0.47
CDCA3-207ENST00000538862 CYP2G1PQ6ZSU1 146 aa12.11□□□□□ -0.47
CDCA3-207ENST00000538862 ST6GALNAC3Q8NDV1 305 aa12.11□□□□□ -0.47
CDCA3-207ENST00000538862 GGACTQ9BVM4 153 aa12.11□□□□□ -0.47
CDCA3-207ENST00000538862 CLN8Q9UBY8 286 aa12.11□□□□□ -0.47
CDCA3-207ENST00000538862 IFITM10A6NMD0 228 aa12.11□□□□□ -0.47
CDCA3-207ENST00000538862 ZG16O60844 167 aa12.11□□□□□ -0.47
CDCA3-207ENST00000538862 AGFG2O95081 481 aa12.11□□□□□ -0.47
CDCA3-207ENST00000538862 LY86O95711 162 aa12.11□□□□□ -0.47
CDCA3-207ENST00000538862 ADH4P08319 380 aa12.11□□□□□ -0.47
CDCA3-207ENST00000538862 FGF7P21781 194 aa12.11□□□□□ -0.47
CDCA3-207ENST00000538862 S100A2P29034 98 aa12.11□□□□□ -0.47
CDCA3-207ENST00000538862 GPX4P36969 197 aaPredicted RBP12.11□□□□□ -0.47
CDCA3-207ENST00000538862 PSMB3P49720 205 aa12.11□□□□□ -0.47
CDCA3-207ENST00000538862 TDGF1P3P51864 188 aa12.11□□□□□ -0.47
CDCA3-207ENST00000538862 GNB2P62879 340 aa12.11□□□□□ -0.47
CDCA3-207ENST00000538862 HTD2P86397 168 aa12.11□□□□□ -0.47
CDCA3-207ENST00000538862 DEFA6Q01524 100 aa12.11□□□□□ -0.47
CDCA3-207ENST00000538862 MZT1Q08AG7 82 aa12.11□□□□□ -0.47
CDCA3-207ENST00000538862 ZNF718Q3SXZ3 478 aa12.11□□□□□ -0.47
CDCA3-207ENST00000538862 AARDQ4LEZ3 155 aa12.11□□□□□ -0.47
CDCA3-207ENST00000538862 LBHQ53QV2 105 aaPredicted RBP12.11□□□□□ -0.47
CDCA3-207ENST00000538862 CNEP1R1Q8N9A8 125 aa12.11□□□□□ -0.47
CDCA3-207ENST00000538862 FAM216AQ8WUB2 273 aa12.11□□□□□ -0.47
CDCA3-207ENST00000538862 CACNA1DQ01668 2161 aa12.1□□□□□ -0.47
CDCA3-207ENST00000538862 KBTBD11O94819 623 aa12.1□□□□□ -0.47
CDCA3-207ENST00000538862 PTBP3O95758 552 aaKnown RBP12.1□□□□□ -0.47
CDCA3-207ENST00000538862 CD55P08174 381 aa12.1□□□□□ -0.47
CDCA3-207ENST00000538862 NKX6-1P78426 367 aaPredicted RBP12.1□□□□□ -0.47
CDCA3-207ENST00000538862 TMEM241Q24JQ0 296 aa12.1□□□□□ -0.47
CDCA3-207ENST00000538862 PRAMEF6Q5VXH4 476 aa12.1□□□□□ -0.47
CDCA3-207ENST00000538862 MBNL2Q5VZF2 373 aaKnown RBP12.1□□□□□ -0.47
CDCA3-207ENST00000538862 FAM53AQ6NSI3 398 aaPredicted RBP12.1□□□□□ -0.47
CDCA3-207ENST00000538862 OR10G9Q8NGN4 311 aa12.1□□□□□ -0.47
CDCA3-207ENST00000538862 OR10G7Q8NGN6 311 aa12.1□□□□□ -0.47
CDCA3-207ENST00000538862 OR13A1Q8NGR1 328 aa12.1□□□□□ -0.47
CDCA3-207ENST00000538862 EDARADDQ8WWZ3 215 aa12.1□□□□□ -0.47
CDCA3-207ENST00000538862 SMIM7Q9BQ49 75 aa12.1□□□□□ -0.47
CDCA3-207ENST00000538862 ACTR3CQ9C0K3 210 aaPredicted RBP12.1□□□□□ -0.47
CDCA3-207ENST00000538862 MANBALQ9NQG1 85 aa12.1□□□□□ -0.47
CDCA3-207ENST00000538862 PCNX1Q96RV3 2341 aa12.1□□□□□ -0.47
CDCA3-207ENST00000538862 OR5H1A6NKK0 313 aa12.09□□□□□ -0.47
CDCA3-207ENST00000538862 SPINT2O43291 252 aa12.09□□□□□ -0.47
CDCA3-207ENST00000538862 IGLV1-44P01699 117 aa12.09□□□□□ -0.47
CDCA3-207ENST00000538862 MDKP21741 143 aaPredicted RBP12.09□□□□□ -0.47
CDCA3-207ENST00000538862 GCH1P30793 250 aa12.09□□□□□ -0.47
CDCA3-207ENST00000538862 NCR3LG1Q68D85 454 aa12.09□□□□□ -0.47
CDCA3-207ENST00000538862 VWA1Q6PCB0 445 aa12.09□□□□□ -0.47
CDCA3-207ENST00000538862 BTNL3Q6UXE8 466 aa12.09□□□□□ -0.47
CDCA3-207ENST00000538862 SSX9Q7RTT3 188 aa12.09□□□□□ -0.47
CDCA3-207ENST00000538862 ZNF709Q8N972 641 aa12.09□□□□□ -0.47
CDCA3-207ENST00000538862 FAM90A9PA6NNJ1 464 aa12.09□□□□□ -0.47
CDCA3-207ENST00000538862 LINC00473A8K010 186 aa12.09□□□□□ -0.47
CDCA3-207ENST00000538862 C17orf112F2Z3M2 114 aa12.09□□□□□ -0.47
CDCA3-207ENST00000538862 C15orf65H3BRN8 121 aa12.09□□□□□ -0.47
CDCA3-207ENST00000538862 CRYABP02511 175 aaKnown RBP12.09□□□□□ -0.47
CDCA3-207ENST00000538862 CECR9P0C854 216 aa12.09□□□□□ -0.47
CDCA3-207ENST00000538862 SSTR5P35346 364 aa12.09□□□□□ -0.47
CDCA3-207ENST00000538862 FFAR4Q5NUL3 377 aa12.09□□□□□ -0.47
CDCA3-207ENST00000538862 SPNS3Q6ZMD2 512 aa12.09□□□□□ -0.47
CDCA3-207ENST00000538862 C9orf106Q8NAJ2 232 aa12.09□□□□□ -0.47
CDCA3-207ENST00000538862 ABHD5Q8WTS1 349 aa12.09□□□□□ -0.47
CDCA3-207ENST00000538862 SARAFQ96BY9 339 aa12.09□□□□□ -0.47
CDCA3-207ENST00000538862 NEU1Q99519 415 aa12.09□□□□□ -0.47
CDCA3-207ENST00000538862 NPCDR1Q9BY65 106 aa12.09□□□□□ -0.47
CDCA3-207ENST00000538862 PLSCR4Q9NRQ2 329 aa12.09□□□□□ -0.47
CDCA3-207ENST00000538862 METRNQ9UJH8 293 aa12.09□□□□□ -0.47
CDCA3-207ENST00000538862 PPP1R2P9O14990 202 aa12.08□□□□□ -0.48
CDCA3-207ENST00000538862 SOX15O60248 233 aa12.08□□□□□ -0.48
CDCA3-207ENST00000538862 TRGC1P0CF51 173 aa12.08□□□□□ -0.48
CDCA3-207ENST00000538862 FABP6P51161 128 aa12.08□□□□□ -0.48
CDCA3-207ENST00000538862 GFRALQ6UXV0 394 aa12.08□□□□□ -0.48
CDCA3-207ENST00000538862 FRZBQ92765 325 aa12.08□□□□□ -0.48
CDCA3-207ENST00000538862 ZDHHC16Q969W1 377 aa12.08□□□□□ -0.48
CDCA3-207ENST00000538862 SLC25A22Q9H936 323 aa12.08□□□□□ -0.48
CDCA3-207ENST00000538862 PSG11Q9UQ72 335 aa12.08□□□□□ -0.48
CDCA3-207ENST00000538862 IGHV2OR16-5A0A0B4J2B6 119 aa12.07□□□□□ -0.48
CDCA3-207ENST00000538862 MARCH11A6NNE9 402 aa12.07□□□□□ -0.48
CDCA3-207ENST00000538862 PHOX2AO14813 284 aa12.07□□□□□ -0.48
CDCA3-207ENST00000538862 RBMXL2O75526 392 aaKnown RBP12.07□□□□□ -0.48
CDCA3-207ENST00000538862 GZMHP20718 246 aa12.07□□□□□ -0.48
CDCA3-207ENST00000538862 BSXQ3C1V8 233 aa12.07□□□□□ -0.48
CDCA3-207ENST00000538862 HIST3H2BBQ8N257 126 aa12.07□□□□□ -0.48
CDCA3-207ENST00000538862 CD177Q8N6Q3 437 aa12.07□□□□□ -0.48
CDCA3-207ENST00000538862 FAM169BQ8N8A8 192 aa12.07□□□□□ -0.48
CDCA3-207ENST00000538862 PYGO2Q9BRQ0 406 aa12.07□□□□□ -0.48
CDCA3-207ENST00000538862 MSL2Q9HCI7 577 aa12.07□□□□□ -0.48
CDCA3-207ENST00000538862 DOPEY1Q5JWR5 2465 aa12.07□□□□□ -0.48
CDCA3-207ENST00000538862 DOCK11Q5JSL3 2073 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms