RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 RFNGQ9Y644 331 aa16.68■□□□□ 0.26
DDX55-205ENST00000538744 A0A087X0M5 115 aa16.67■□□□□ 0.26
DDX55-205ENST00000538744 A0A1B0GX30 115 aa16.67■□□□□ 0.26
DDX55-205ENST00000538744 J3QR06 171 aa16.67■□□□□ 0.26
DDX55-205ENST00000538744 FHITP49789 147 aa16.67■□□□□ 0.26
DDX55-205ENST00000538744 PDLIM3Q53GG5 364 aaPredicted RBP16.67■□□□□ 0.26
DDX55-205ENST00000538744 SPINK9Q5DT21 86 aa16.67■□□□□ 0.26
DDX55-205ENST00000538744 FAM71F2Q6NXP2 309 aa16.67■□□□□ 0.26
DDX55-205ENST00000538744 THNSL2Q86YJ6 484 aa16.67■□□□□ 0.26
DDX55-205ENST00000538744 OR10X1Q8NGY0 326 aa16.67■□□□□ 0.26
DDX55-205ENST00000538744 TIMD4Q96H15 378 aa16.67■□□□□ 0.26
DDX55-205ENST00000538744 TMEM218A2RU14 115 aa16.67■□□□□ 0.26
DDX55-205ENST00000538744 PPIHO43447 177 aaKnown RBP16.67■□□□□ 0.26
DDX55-205ENST00000538744 SCAF4O95104 1147 aaKnown RBP16.67■□□□□ 0.26
DDX55-205ENST00000538744 OR8U8P0C7N1 319 aa16.67■□□□□ 0.26
DDX55-205ENST00000538744 IGHV1-8P0DP01 117 aa16.67■□□□□ 0.26
DDX55-205ENST00000538744 PLA2G5P39877 138 aa16.67■□□□□ 0.26
DDX55-205ENST00000538744 TAGLNQ01995 201 aaKnown RBP16.67■□□□□ 0.26
DDX55-205ENST00000538744 AKR1C1Q04828 323 aa16.67■□□□□ 0.26
DDX55-205ENST00000538744 ATP6V1FQ16864 119 aa16.67■□□□□ 0.26
DDX55-205ENST00000538744 OR4A47Q6IF82 309 aa16.67■□□□□ 0.26
DDX55-205ENST00000538744 ZNF429Q86V71 674 aa16.67■□□□□ 0.26
DDX55-205ENST00000538744 OR8B3Q8NGG8 313 aa16.67■□□□□ 0.26
DDX55-205ENST00000538744 RAB1CQ92928 201 aa16.67■□□□□ 0.26
DDX55-205ENST00000538744 OR8B2Q96RD0 313 aa16.67■□□□□ 0.26
DDX55-205ENST00000538744 NARFLQ9H6Q4 476 aa16.67■□□□□ 0.26
DDX55-205ENST00000538744 TREM1Q9NP99 234 aa16.67■□□□□ 0.26
DDX55-205ENST00000538744 MIOXQ9UGB7 285 aa16.67■□□□□ 0.26
DDX55-205ENST00000538744 TRAV3A0A0B4J244 114 aa16.66■□□□□ 0.26
DDX55-205ENST00000538744 C15orf61A6NNL5 157 aa16.66■□□□□ 0.26
DDX55-205ENST00000538744 APOA2P02652 100 aa16.66■□□□□ 0.26
DDX55-205ENST00000538744 SRSF3P84103 164 aaKnown RBP16.66■□□□□ 0.26
DDX55-205ENST00000538744 LRRC75BQ2VPJ9 315 aa16.66■□□□□ 0.26
DDX55-205ENST00000538744 AKR1C8PQ5T2L2 129 aa16.66■□□□□ 0.26
DDX55-205ENST00000538744 OR13D1Q8NGV5 346 aa16.66■□□□□ 0.26
DDX55-205ENST00000538744 OR9G1Q8NH87 305 aa16.66■□□□□ 0.26
DDX55-205ENST00000538744 TMEM186Q96B77 213 aa16.66■□□□□ 0.26
DDX55-205ENST00000538744 PINX1Q96BK5 328 aaKnown RBP16.66■□□□□ 0.26
DDX55-205ENST00000538744 AIFM2Q9BRQ8 373 aa16.66■□□□□ 0.26
DDX55-205ENST00000538744 MRPL20Q9BYC9 149 aaKnown RBP16.66■□□□□ 0.26
DDX55-205ENST00000538744 A0A1W2PPH5 198 aa16.65■□□□□ 0.26
DDX55-205ENST00000538744 AGPAT2O15120 278 aa16.65■□□□□ 0.26
DDX55-205ENST00000538744 SCO1O75880 301 aa16.65■□□□□ 0.26
DDX55-205ENST00000538744 OR10P1Q8NGE3 313 aa16.65■□□□□ 0.26
DDX55-205ENST00000538744 NEIL1Q96FI4 390 aaPredicted RBP16.65■□□□□ 0.26
DDX55-205ENST00000538744 PSMG3Q9BT73 122 aaPredicted RBP16.65■□□□□ 0.26
DDX55-205ENST00000538744 PMS2P5A8MQ11 134 aa16.65■□□□□ 0.26
DDX55-205ENST00000538744 LY6HO94772 140 aa16.65■□□□□ 0.26
DDX55-205ENST00000538744 APOC3P02656 99 aa16.65■□□□□ 0.26
DDX55-205ENST00000538744 ARG1P05089 322 aa16.65■□□□□ 0.26
DDX55-205ENST00000538744 RPP30P78346 268 aaKnown RBP16.65■□□□□ 0.26
DDX55-205ENST00000538744 DPPA3Q6W0C5 159 aa16.65■□□□□ 0.26
DDX55-205ENST00000538744 C11orf42Q8N5U0 333 aa16.65■□□□□ 0.26
DDX55-205ENST00000538744 TMEM147Q9BVK8 224 aa16.65■□□□□ 0.26
DDX55-205ENST00000538744 WDR61Q9GZS3 305 aaKnown RBP16.65■□□□□ 0.26
DDX55-205ENST00000538744 TMEM133Q9H2Q1 129 aa16.65■□□□□ 0.26
DDX55-205ENST00000538744 TMEM231Q9H6L2 316 aa16.65■□□□□ 0.26
DDX55-205ENST00000538744 FOXA2Q9Y261 457 aaPredicted RBP16.65■□□□□ 0.26
DDX55-205ENST00000538744 DOCK11Q5JSL3 2073 aa16.65■□□□□ 0.26
DDX55-205ENST00000538744 ABCA4P78363 2273 aa16.64■□□□□ 0.26
DDX55-205ENST00000538744 SNCAP37840 140 aa16.64■□□□□ 0.25
DDX55-205ENST00000538744 ZNF137PP52743 207 aa16.64■□□□□ 0.25
DDX55-205ENST00000538744 ABHD12Q8N2K0 398 aa16.64■□□□□ 0.25
DDX55-205ENST00000538744 HIPK2Q9H2X6 1198 aa16.64■□□□□ 0.25
DDX55-205ENST00000538744 HEYLQ9NQ87 328 aaPredicted RBP16.64■□□□□ 0.25
DDX55-205ENST00000538744 TMEM14BQ9NUH8 114 aa16.64■□□□□ 0.25
DDX55-205ENST00000538744 TCF19Q9Y242 345 aa16.64■□□□□ 0.25
DDX55-205ENST00000538744 FBXO7Q9Y3I1 522 aa16.64■□□□□ 0.25
DDX55-205ENST00000538744 TET2Q6N021 2002 aaPredicted RBP16.64■□□□□ 0.25
DDX55-205ENST00000538744 UBE2L5PA0A1B0GUS4 154 aa16.63■□□□□ 0.25
DDX55-205ENST00000538744 A0A1W2PPR1 153 aa16.63■□□□□ 0.25
DDX55-205ENST00000538744 C15orf62A8K5M9 175 aa16.63■□□□□ 0.25
DDX55-205ENST00000538744 RNASEK-C17orf49H0YIS7 233 aa16.63■□□□□ 0.25
DDX55-205ENST00000538744 RBP4P02753 201 aa16.63■□□□□ 0.25
DDX55-205ENST00000538744 GNB2P62879 340 aa16.63■□□□□ 0.25
DDX55-205ENST00000538744 LFNGQ8NES3 379 aa16.63■□□□□ 0.25
DDX55-205ENST00000538744 OR5AN1Q8NGI8 311 aa16.63■□□□□ 0.25
DDX55-205ENST00000538744 C8orf46Q8TAG6 207 aa16.63■□□□□ 0.25
DDX55-205ENST00000538744 OSR1Q8TAX0 266 aaPredicted RBP16.63■□□□□ 0.25
DDX55-205ENST00000538744 RSG1Q9BU20 258 aa16.63■□□□□ 0.25
DDX55-205ENST00000538744 UQCC1Q9NVA1 299 aa16.63■□□□□ 0.25
DDX55-205ENST00000538744 FAM96BQ9Y3D0 163 aa16.63■□□□□ 0.25
DDX55-205ENST00000538744 TPRP12270 2363 aaKnown RBP16.63■□□□□ 0.25
DDX55-205ENST00000538744 H0YJW9 148 aa16.62■□□□□ 0.25
DDX55-205ENST00000538744 H7C2Y5 167 aa16.62■□□□□ 0.25
DDX55-205ENST00000538744 C19orf84I3L1E1 186 aa16.62■□□□□ 0.25
DDX55-205ENST00000538744 IGKV1-16P04430 117 aa16.62■□□□□ 0.25
DDX55-205ENST00000538744 IL3RAP26951 378 aa16.62■□□□□ 0.25
DDX55-205ENST00000538744 VDAC2P45880 294 aaPredicted RBP16.62■□□□□ 0.25
DDX55-205ENST00000538744 DVL1P1P54792 670 aaPredicted RBP16.62■□□□□ 0.25
DDX55-205ENST00000538744 WDR25Q64LD2 544 aaPredicted RBP16.62■□□□□ 0.25
DDX55-205ENST00000538744 TAF15Q92804 592 aaKnown RBP eCLIP16.62■□□□□ 0.25
DDX55-205ENST00000538744 TNFRSF14Q92956 283 aa16.62■□□□□ 0.25
DDX55-205ENST00000538744 ST6GALNAC6Q969X2 333 aa16.62■□□□□ 0.25
DDX55-205ENST00000538744 CHODLQ9H9P2 273 aa16.62■□□□□ 0.25
DDX55-205ENST00000538744 PRNDQ9UKY0 176 aa16.62■□□□□ 0.25
DDX55-205ENST00000538744 PPIAL4CA0A0B4J2A2 164 aa16.62■□□□□ 0.25
DDX55-205ENST00000538744 CD5P06127 495 aa16.62■□□□□ 0.25
DDX55-205ENST00000538744 IL6RP08887 468 aaPredicted RBP16.62■□□□□ 0.25
DDX55-205ENST00000538744 PPIAL4GP0DN37 164 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms