RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 MZT1Q08AG7 82 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 TMEM41BQ5BJD5 291 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 TIMM23BQ5SRD1 257 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 PRSS33Q8NF86 280 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 RAB24Q969Q5 203 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 HIPK2Q9H2X6 1198 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 DYNLRB1Q9NP97 96 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 NIT2Q9NQR4 276 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 IGHV3-72A0A0B4J1Y9 119 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 PROP1O75360 226 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 IFNA1P01562 189 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 CRYABP02511 175 aaKnown RBP7.22□□□□□ -1.25
UBE3B-208ENST00000538070 OR4A8P0C604 315 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 CD40P25942 277 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 DUTP33316 252 aaKnown RBP7.22□□□□□ -1.25
UBE3B-208ENST00000538070 GLRXP35754 106 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 PSMB3P49720 205 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 MIC13Q5XKP0 118 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 OR51G1Q8NGK1 321 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 Q8WTZ3 238 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 SNX22Q96L94 193 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 HSD17B10Q99714 261 aaKnown RBP7.22□□□□□ -1.25
UBE3B-208ENST00000538070 TMEM147Q9BVK8 224 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 IFT22Q9H7X7 185 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 HES4Q9HCC6 221 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 TMEM140Q9NV12 185 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 LOC102723971A0A1B0GUV8 181 aa7.21□□□□□ -1.25
UBE3B-208ENST00000538070 PGPEP1LA6NFU8 196 aa7.21□□□□□ -1.25
UBE3B-208ENST00000538070 LYNX1G3V0Z9 82 aa7.21□□□□□ -1.25
UBE3B-208ENST00000538070 ENSAO43768 121 aaKnown RBP7.21□□□□□ -1.25
UBE3B-208ENST00000538070 IGHV1-46P01743 117 aa7.21□□□□□ -1.25
UBE3B-208ENST00000538070 TRGC2P03986 189 aa7.21□□□□□ -1.25
UBE3B-208ENST00000538070 LYNX1P0DP58 116 aa7.21□□□□□ -1.25
UBE3B-208ENST00000538070 HOXB1P14653 301 aaPredicted RBP7.21□□□□□ -1.25
UBE3B-208ENST00000538070 CHRNA7P36544 502 aa7.21□□□□□ -1.25
UBE3B-208ENST00000538070 C1orf229Q6ZS94 237 aaPredicted RBP7.21□□□□□ -1.25
UBE3B-208ENST00000538070 C1orf162Q8NEQ5 155 aaPredicted RBP7.21□□□□□ -1.25
UBE3B-208ENST00000538070 LRFN3Q9BTN0 628 aa7.21□□□□□ -1.25
UBE3B-208ENST00000538070 GCM1Q9NP62 436 aa7.21□□□□□ -1.25
UBE3B-208ENST00000538070 ASH1LQ9NR48 2969 aaKnown RBP7.21□□□□□ -1.26
UBE3B-208ENST00000538070 MBD3L4A6NDZ8 208 aaPredicted RBP7.21□□□□□ -1.26
UBE3B-208ENST00000538070 BTBD17A6NE02 478 aa7.21□□□□□ -1.26
UBE3B-208ENST00000538070 MBD3L3A6NE82 208 aaPredicted RBP7.21□□□□□ -1.26
UBE3B-208ENST00000538070 MBD3L5A6NJ08 208 aaPredicted RBP7.21□□□□□ -1.26
UBE3B-208ENST00000538070 IGLV1-44P01699 117 aa7.21□□□□□ -1.26
UBE3B-208ENST00000538070 HSPB1P04792 205 aaKnown RBP7.21□□□□□ -1.26
UBE3B-208ENST00000538070 ADH4P08319 380 aa7.21□□□□□ -1.26
UBE3B-208ENST00000538070 CEACAM1P13688 526 aa7.21□□□□□ -1.26
UBE3B-208ENST00000538070 BSPH1Q075Z2 132 aa7.21□□□□□ -1.26
UBE3B-208ENST00000538070 GUSBP1Q15486 140 aa7.21□□□□□ -1.26
UBE3B-208ENST00000538070 RNF212Q495C1 297 aa7.21□□□□□ -1.26
UBE3B-208ENST00000538070 ZNF506Q5JVG8 444 aa7.21□□□□□ -1.26
UBE3B-208ENST00000538070 IGFL2Q6UWQ7 119 aa7.21□□□□□ -1.26
UBE3B-208ENST00000538070 MBD3L2Q8NHZ7 208 aaPredicted RBP7.21□□□□□ -1.26
UBE3B-208ENST00000538070 HSPB7Q9UBY9 170 aa7.21□□□□□ -1.26
UBE3B-208ENST00000538070 NAV3Q8IVL0 2385 aa7.21□□□□□ -1.26
UBE3B-208ENST00000538070 SAA2-SAA4A0A096LPE2 208 aa7.21□□□□□ -1.26
UBE3B-208ENST00000538070 FAM90A27PA6NNH2 459 aa7.21□□□□□ -1.26
UBE3B-208ENST00000538070 C16orf97H3BN30 126 aa7.21□□□□□ -1.26
UBE3B-208ENST00000538070 SAA2P0DJI9 122 aaPredicted RBP7.21□□□□□ -1.26
UBE3B-208ENST00000538070 GATA2P23769 480 aaPredicted RBP7.21□□□□□ -1.26
UBE3B-208ENST00000538070 LMO1P25800 156 aa7.21□□□□□ -1.26
UBE3B-208ENST00000538070 MBNL2Q5VZF2 373 aaKnown RBP7.21□□□□□ -1.26
UBE3B-208ENST00000538070 MOB3BQ86TA1 216 aa7.21□□□□□ -1.26
UBE3B-208ENST00000538070 PINX1Q96BK5 328 aaKnown RBP7.21□□□□□ -1.26
UBE3B-208ENST00000538070 LURAP1Q96LR2 239 aa7.21□□□□□ -1.26
UBE3B-208ENST00000538070 AGMATQ9BSE5 352 aa7.21□□□□□ -1.26
UBE3B-208ENST00000538070 ACTR3CQ9C0K3 210 aaPredicted RBP7.21□□□□□ -1.26
UBE3B-208ENST00000538070 A0A0G2JNJ9 132 aa7.2□□□□□ -1.26
UBE3B-208ENST00000538070 A0A1W2PPQ1 181 aa7.2□□□□□ -1.26
UBE3B-208ENST00000538070 NPIPB11E5RHQ5 1161 aa7.2□□□□□ -1.26
UBE3B-208ENST00000538070 C15orf65H3BRN8 121 aa7.2□□□□□ -1.26
UBE3B-208ENST00000538070 CD1BP29016 333 aa7.2□□□□□ -1.26
UBE3B-208ENST00000538070 KHDC3LQ587J8 217 aa7.2□□□□□ -1.26
UBE3B-208ENST00000538070 CT45A1Q5HYN5 189 aa7.2□□□□□ -1.26
UBE3B-208ENST00000538070 TMEM108Q6UXF1 575 aa7.2□□□□□ -1.26
UBE3B-208ENST00000538070 Q6ZS92 163 aa7.2□□□□□ -1.26
UBE3B-208ENST00000538070 DOLPP1Q86YN1 238 aa7.2□□□□□ -1.26
UBE3B-208ENST00000538070 CT45A3Q8NHU0 189 aa7.2□□□□□ -1.26
UBE3B-208ENST00000538070 NPCDR1Q9BY65 106 aa7.2□□□□□ -1.26
UBE3B-208ENST00000538070 OR6C3Q9NZP0 311 aa7.2□□□□□ -1.26
UBE3B-208ENST00000538070 Q9UFV3 132 aa7.2□□□□□ -1.26
UBE3B-208ENST00000538070 PIGBOS1A0A0B4J2F0 54 aa7.2□□□□□ -1.26
UBE3B-208ENST00000538070 A8MXE2 369 aa7.2□□□□□ -1.26
UBE3B-208ENST00000538070 C1QTNF9BB2RNN3 333 aa7.2□□□□□ -1.26
UBE3B-208ENST00000538070 IFNL4K9M1U5 179 aa7.2□□□□□ -1.26
UBE3B-208ENST00000538070 RAB29O14966 203 aa7.2□□□□□ -1.26
UBE3B-208ENST00000538070 CDC34P49427 236 aaPredicted RBP7.2□□□□□ -1.26
UBE3B-208ENST00000538070 MLANAQ16655 118 aa7.2□□□□□ -1.26
UBE3B-208ENST00000538070 ZNF251Q9BRH9 671 aa7.2□□□□□ -1.26
UBE3B-208ENST00000538070 SCNM1Q9BWG6 230 aa7.2□□□□□ -1.26
UBE3B-208ENST00000538070 VAX2Q9UIW0 290 aa7.2□□□□□ -1.26
UBE3B-208ENST00000538070 TANC2Q9HCD6 1990 aa7.2□□□□□ -1.26
UBE3B-208ENST00000538070 ARHGAP32A7KAX9 2087 aa7.2□□□□□ -1.26
UBE3B-208ENST00000538070 MEOX2P50222 304 aa7.2□□□□□ -1.26
UBE3B-208ENST00000538070 NUBP1P53384 320 aa7.2□□□□□ -1.26
UBE3B-208ENST00000538070 TMEM14EPQ6UXP3 125 aa7.2□□□□□ -1.26
UBE3B-208ENST00000538070 ZBTB34Q8NCN2 500 aa7.2□□□□□ -1.26
UBE3B-208ENST00000538070 SAP30LQ9HAJ7 183 aa7.2□□□□□ -1.26
UBE3B-208ENST00000538070 LAMP3Q9UQV4 416 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms