RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 RABL2AQ9UBK7 228 aaPredicted RBP11.54□□□□□ -0.56
LRRK1-211ENST00000538064 RABL2BQ9UNT1 228 aa11.54□□□□□ -0.56
LRRK1-211ENST00000538064 LSM4Q9Y4Z0 139 aaKnown RBP11.54□□□□□ -0.56
LRRK1-211ENST00000538064 LINC01619G3V211 115 aa11.53□□□□□ -0.56
LRRK1-211ENST00000538064 OVOL1O14753 267 aa11.53□□□□□ -0.56
LRRK1-211ENST00000538064 ARPC1BO15143 372 aaKnown RBP11.53□□□□□ -0.56
LRRK1-211ENST00000538064 IGLV2-23P01705 113 aa11.53□□□□□ -0.56
LRRK1-211ENST00000538064 TAGLNQ01995 201 aaKnown RBP11.53□□□□□ -0.56
LRRK1-211ENST00000538064 CDK10Q15131 360 aa11.53□□□□□ -0.56
LRRK1-211ENST00000538064 LAX1Q8IWV1 398 aa11.53□□□□□ -0.56
LRRK1-211ENST00000538064 LFNGQ8NES3 379 aa11.53□□□□□ -0.56
LRRK1-211ENST00000538064 MCFD2Q8NI22 146 aa11.53□□□□□ -0.56
LRRK1-211ENST00000538064 DCUN1D4Q92564 292 aa11.53□□□□□ -0.56
LRRK1-211ENST00000538064 SNAPC3Q92966 411 aa11.53□□□□□ -0.56
LRRK1-211ENST00000538064 HARBI1Q96MB7 349 aa11.53□□□□□ -0.56
LRRK1-211ENST00000538064 MIXL1Q9H2W2 232 aa11.53□□□□□ -0.56
LRRK1-211ENST00000538064 ANAPC10Q9UM13 185 aa11.53□□□□□ -0.56
LRRK1-211ENST00000538064 ZNF256Q9Y2P7 627 aaPredicted RBP11.53□□□□□ -0.56
LRRK1-211ENST00000538064 TNCP24821 2201 aa11.52□□□□□ -0.56
LRRK1-211ENST00000538064 IGHV4OR15-8A0A075B7B6 117 aa11.52□□□□□ -0.57
LRRK1-211ENST00000538064 A0A087WW49 117 aa11.52□□□□□ -0.57
LRRK1-211ENST00000538064 CRYGBP07316 175 aa11.52□□□□□ -0.57
LRRK1-211ENST00000538064 NAT1P18440 290 aa11.52□□□□□ -0.57
LRRK1-211ENST00000538064 CD40LGP29965 261 aa11.52□□□□□ -0.57
LRRK1-211ENST00000538064 FCGR2CP31995 323 aa11.52□□□□□ -0.57
LRRK1-211ENST00000538064 RCVRNP35243 200 aa11.52□□□□□ -0.57
LRRK1-211ENST00000538064 LGALS7P47929 136 aa11.52□□□□□ -0.57
LRRK1-211ENST00000538064 SLURP1P55000 103 aa11.52□□□□□ -0.57
LRRK1-211ENST00000538064 TPPP2P59282 170 aa11.52□□□□□ -0.57
LRRK1-211ENST00000538064 SSBP2P81877 361 aaPredicted RBP11.52□□□□□ -0.57
LRRK1-211ENST00000538064 MRPS10P82664 201 aaKnown RBP11.52□□□□□ -0.57
LRRK1-211ENST00000538064 CBX3Q13185 183 aa11.52□□□□□ -0.57
LRRK1-211ENST00000538064 FXYD3Q14802 87 aa11.52□□□□□ -0.57
LRRK1-211ENST00000538064 RTL8BQ17RB0 113 aa11.52□□□□□ -0.57
LRRK1-211ENST00000538064 ZNF429Q86V71 674 aa11.52□□□□□ -0.57
LRRK1-211ENST00000538064 ZNF645Q8N7E2 425 aa11.52□□□□□ -0.57
LRRK1-211ENST00000538064 OR5H2Q8NGV7 314 aa11.52□□□□□ -0.57
LRRK1-211ENST00000538064 GRPEL2Q8TAA5 225 aa11.52□□□□□ -0.57
LRRK1-211ENST00000538064 DIRAS2Q96HU8 199 aa11.52□□□□□ -0.57
LRRK1-211ENST00000538064 ADTRPQ96IZ2 230 aa11.52□□□□□ -0.57
LRRK1-211ENST00000538064 DCUN1D5Q9BTE7 237 aa11.52□□□□□ -0.57
LRRK1-211ENST00000538064 KMT2CQ8NEZ4 4911 aaKnown RBP11.52□□□□□ -0.57
LRRK1-211ENST00000538064 HUWE1Q7Z6Z7 4374 aaKnown RBP11.51□□□□□ -0.57
LRRK1-211ENST00000538064 H3BUA1 57 aa11.51□□□□□ -0.57
LRRK1-211ENST00000538064 J3QRK9 145 aa11.51□□□□□ -0.57
LRRK1-211ENST00000538064 TUSC2O75896 110 aa11.51□□□□□ -0.57
LRRK1-211ENST00000538064 RRASP10301 218 aa11.51□□□□□ -0.57
LRRK1-211ENST00000538064 TMEM177Q53S58 311 aa11.51□□□□□ -0.57
LRRK1-211ENST00000538064 POC5Q8NA72 575 aa11.51□□□□□ -0.57
LRRK1-211ENST00000538064 GIMAP1Q8WWP7 306 aa11.51□□□□□ -0.57
LRRK1-211ENST00000538064 FCAMRQ8WWV6 532 aa11.51□□□□□ -0.57
LRRK1-211ENST00000538064 DLX4Q92988 240 aaPredicted RBP11.51□□□□□ -0.57
LRRK1-211ENST00000538064 MS4A10Q96PG2 267 aa11.51□□□□□ -0.57
LRRK1-211ENST00000538064 NXF2Q9GZY0 626 aaKnown RBP11.51□□□□□ -0.57
LRRK1-211ENST00000538064 EHFQ9NZC4 300 aa11.51□□□□□ -0.57
LRRK1-211ENST00000538064 PPYP01298 95 aa11.5□□□□□ -0.57
LRRK1-211ENST00000538064 IGHV3-11P01762 117 aa11.5□□□□□ -0.57
LRRK1-211ENST00000538064 PMP2P02689 132 aa11.5□□□□□ -0.57
LRRK1-211ENST00000538064 TRGV3P03979 118 aa11.5□□□□□ -0.57
LRRK1-211ENST00000538064 NHLRC4P0CG21 123 aaPredicted RBP11.5□□□□□ -0.57
LRRK1-211ENST00000538064 AADACP22760 399 aa11.5□□□□□ -0.57
LRRK1-211ENST00000538064 HLA-DMAP28067 261 aa11.5□□□□□ -0.57
LRRK1-211ENST00000538064 DUTP33316 252 aaKnown RBP11.5□□□□□ -0.57
LRRK1-211ENST00000538064 HERV-K104P61576 105 aa11.5□□□□□ -0.57
LRRK1-211ENST00000538064 DYRK1AQ13627 763 aa11.5□□□□□ -0.57
LRRK1-211ENST00000538064 IL18Q14116 193 aa11.5□□□□□ -0.57
LRRK1-211ENST00000538064 OVCH2Q7RTZ1 564 aa11.5□□□□□ -0.57
LRRK1-211ENST00000538064 BVESQ8NE79 360 aa11.5□□□□□ -0.57
LRRK1-211ENST00000538064 DDB2Q92466 427 aa11.5□□□□□ -0.57
LRRK1-211ENST00000538064 BORCS5Q969J3 196 aa11.5□□□□□ -0.57
LRRK1-211ENST00000538064 DGCR14Q96DF8 476 aaKnown RBP11.5□□□□□ -0.57
LRRK1-211ENST00000538064 RHOVQ96L33 236 aa11.5□□□□□ -0.57
LRRK1-211ENST00000538064 ABHD1Q96SE0 405 aa11.5□□□□□ -0.57
LRRK1-211ENST00000538064 GABARAPH6UMI1 98 aa11.49□□□□□ -0.57
LRRK1-211ENST00000538064 SHOXO15266 292 aa11.49□□□□□ -0.57
LRRK1-211ENST00000538064 SAP30O75446 220 aa11.49□□□□□ -0.57
LRRK1-211ENST00000538064 CNIH1O95406 144 aa11.49□□□□□ -0.57
LRRK1-211ENST00000538064 HSPB1P04792 205 aaKnown RBP11.49□□□□□ -0.57
LRRK1-211ENST00000538064 S100A5P33763 92 aa11.49□□□□□ -0.57
LRRK1-211ENST00000538064 RFX2P48378 723 aa11.49□□□□□ -0.57
LRRK1-211ENST00000538064 PJVKQ0ZLH3 352 aa11.49□□□□□ -0.57
LRRK1-211ENST00000538064 MSMO1Q15800 293 aa11.49□□□□□ -0.57
LRRK1-211ENST00000538064 RNASE12Q5GAN4 147 aaKnown RBP11.49□□□□□ -0.57
LRRK1-211ENST00000538064 ACSM6Q6P461 480 aa11.49□□□□□ -0.57
LRRK1-211ENST00000538064 OR6F1Q8NGZ6 308 aa11.49□□□□□ -0.57
LRRK1-211ENST00000538064 TMEM68Q96MH6 324 aa11.49□□□□□ -0.57
LRRK1-211ENST00000538064 RBMX2Q9Y388 322 aaKnown RBP11.49□□□□□ -0.57
LRRK1-211ENST00000538064 IGKV1D-13A0A0B4J2D9 117 aa11.48□□□□□ -0.57
LRRK1-211ENST00000538064 FABP12A6NFH5 140 aa11.48□□□□□ -0.57
LRRK1-211ENST00000538064 SRRM4A7MD48 611 aaKnown RBP11.48□□□□□ -0.57
LRRK1-211ENST00000538064 LINC00473A8K010 186 aa11.48□□□□□ -0.57
LRRK1-211ENST00000538064 CTDSPLO15194 276 aa11.48□□□□□ -0.57
LRRK1-211ENST00000538064 BRI3O95415 125 aa11.48□□□□□ -0.57
LRRK1-211ENST00000538064 LY86O95711 162 aa11.48□□□□□ -0.57
LRRK1-211ENST00000538064 IGKV1-13P0DP09 117 aa11.48□□□□□ -0.57
LRRK1-211ENST00000538064 TBPP20226 339 aa11.48□□□□□ -0.57
LRRK1-211ENST00000538064 HRH1P35367 487 aa11.48□□□□□ -0.57
LRRK1-211ENST00000538064 FXYD4P59646 89 aa11.48□□□□□ -0.57
LRRK1-211ENST00000538064 UBE2KP61086 200 aa11.48□□□□□ -0.57
LRRK1-211ENST00000538064 TSPAN5P62079 268 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms