RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 TRAT1Q6PIZ9 186 aa10.13□□□□□ -0.79
CPSF7-218ENST00000537641 OR10G8Q8NGN5 311 aa10.13□□□□□ -0.79
CPSF7-218ENST00000537641 SGMS2Q8NHU3 365 aa10.13□□□□□ -0.79
CPSF7-218ENST00000537641 TMEM204Q9BSN7 226 aa10.13□□□□□ -0.79
CPSF7-218ENST00000537641 ZNF407Q9C0G0 2248 aa10.13□□□□□ -0.79
CPSF7-218ENST00000537641 ZNF705FA8MVS1 300 aaPredicted RBP10.13□□□□□ -0.79
CPSF7-218ENST00000537641 PSPNO60542 156 aa10.13□□□□□ -0.79
CPSF7-218ENST00000537641 RBMXL2O75526 392 aaKnown RBP10.13□□□□□ -0.79
CPSF7-218ENST00000537641 CXorf1O96002 111 aa10.13□□□□□ -0.79
CPSF7-218ENST00000537641 ZNF705DP0CH99 300 aaPredicted RBP10.13□□□□□ -0.79
CPSF7-218ENST00000537641 ZNF705BP0CI00 300 aaPredicted RBP10.13□□□□□ -0.79
CPSF7-218ENST00000537641 RANP62826 216 aaKnown RBP10.13□□□□□ -0.79
CPSF7-218ENST00000537641 TMEM256Q8N2U0 113 aa10.13□□□□□ -0.79
CPSF7-218ENST00000537641 OR52E5Q8NH55 327 aa10.13□□□□□ -0.79
CPSF7-218ENST00000537641 TMEM68Q96MH6 324 aa10.13□□□□□ -0.79
CPSF7-218ENST00000537641 C20orf144Q9BQM9 153 aa10.13□□□□□ -0.79
CPSF7-218ENST00000537641 IL36BQ9NZH7 164 aa10.13□□□□□ -0.79
CPSF7-218ENST00000537641 LY96Q9Y6Y9 160 aa10.13□□□□□ -0.79
CPSF7-218ENST00000537641 DNAJC13O75165 2243 aa10.12□□□□□ -0.79
CPSF7-218ENST00000537641 KNTC1P50748 2209 aa10.12□□□□□ -0.79
CPSF7-218ENST00000537641 MED12LQ86YW9 2145 aa10.12□□□□□ -0.79
CPSF7-218ENST00000537641 TRAV38-1A0A0B4J264 116 aa10.12□□□□□ -0.79
CPSF7-218ENST00000537641 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.12□□□□□ -0.79
CPSF7-218ENST00000537641 MARCH11A6NNE9 402 aa10.12□□□□□ -0.79
CPSF7-218ENST00000537641 EGR1P18146 543 aa10.12□□□□□ -0.79
CPSF7-218ENST00000537641 GCH1P30793 250 aa10.12□□□□□ -0.79
CPSF7-218ENST00000537641 TIMP3P35625 211 aa10.12□□□□□ -0.79
CPSF7-218ENST00000537641 TMPRSS3P57727 454 aa10.12□□□□□ -0.79
CPSF7-218ENST00000537641 UBE2G2P60604 165 aa10.12□□□□□ -0.79
CPSF7-218ENST00000537641 RPS16P62249 146 aaKnown RBP10.12□□□□□ -0.79
CPSF7-218ENST00000537641 PDLIM3Q53GG5 364 aaPredicted RBP10.12□□□□□ -0.79
CPSF7-218ENST00000537641 TEX43Q6ZNM6 134 aa10.12□□□□□ -0.79
CPSF7-218ENST00000537641 MYPOPQ86VE0 399 aaPredicted RBP10.12□□□□□ -0.79
CPSF7-218ENST00000537641 ZNF114Q8NC26 417 aa10.12□□□□□ -0.79
CPSF7-218ENST00000537641 C11orf52Q96A22 123 aa10.12□□□□□ -0.79
CPSF7-218ENST00000537641 TBX15Q96SF7 602 aa10.12□□□□□ -0.79
CPSF7-218ENST00000537641 DERL1Q9BUN8 251 aa10.12□□□□□ -0.79
CPSF7-218ENST00000537641 QTRT1Q9BXR0 403 aaKnown RBP10.12□□□□□ -0.79
CPSF7-218ENST00000537641 OR2J1Q9GZK6 312 aa10.12□□□□□ -0.79
CPSF7-218ENST00000537641 ZDHHC11Q9H8X9 412 aa10.12□□□□□ -0.79
CPSF7-218ENST00000537641 TMEM106BQ9NUM4 274 aa10.12□□□□□ -0.79
CPSF7-218ENST00000537641 A0A1B0GWJ7 208 aa10.11□□□□□ -0.79
CPSF7-218ENST00000537641 C9JCJ5 164 aa10.11□□□□□ -0.79
CPSF7-218ENST00000537641 RBFOX2O43251 390 aaKnown RBP eCLIP10.11□□□□□ -0.794e-7■□□□□ 10.3
CPSF7-218ENST00000537641 TNFSF13O75888 250 aa10.11□□□□□ -0.79
CPSF7-218ENST00000537641 CD46P15529 392 aa10.11□□□□□ -0.79
CPSF7-218ENST00000537641 CEBPDP49716 269 aaPredicted RBP10.11□□□□□ -0.79
CPSF7-218ENST00000537641 EDDM3BP56851 147 aa10.11□□□□□ -0.79
CPSF7-218ENST00000537641 HTD2P86397 168 aa10.11□□□□□ -0.79
CPSF7-218ENST00000537641 TGFBR3Q03167 851 aa10.11□□□□□ -0.79
CPSF7-218ENST00000537641 ZNF718Q3SXZ3 478 aa10.11□□□□□ -0.79
CPSF7-218ENST00000537641 SLC25A40Q8TBP6 338 aa10.11□□□□□ -0.79
CPSF7-218ENST00000537641 COQ2Q96H96 371 aa10.11□□□□□ -0.79
CPSF7-218ENST00000537641 WFIKKN1Q96NZ8 548 aa10.11□□□□□ -0.79
CPSF7-218ENST00000537641 PPP1R14DQ9NXH3 145 aa10.11□□□□□ -0.79
CPSF7-218ENST00000537641 PTPRBP23467 1997 aa10.11□□□□□ -0.79
CPSF7-218ENST00000537641 TRBV9A0A0B4J1U6 114 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 LINC00473A8K010 186 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 IFNL4K9M1U5 179 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 GALR2O43603 387 aaPredicted RBP10.1□□□□□ -0.79
CPSF7-218ENST00000537641 YPEL1O60688 119 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 HPRT1P00492 218 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 CRYABP02511 175 aaKnown RBP10.1□□□□□ -0.79
CPSF7-218ENST00000537641 RPLP1P05386 114 aaKnown RBP10.1□□□□□ -0.79
CPSF7-218ENST00000537641 GRPP07492 148 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 ADH4P08319 380 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 OR9G9P0C7N8 305 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 ARL14EPLP0DKL9 152 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 DEFA4P12838 97 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 BTF3P20290 206 aaKnown RBP10.1□□□□□ -0.79
CPSF7-218ENST00000537641 AESQ08117 197 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 MRGPRDQ8TDS7 321 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 YPEL2Q96QA6 119 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 GGTLC1Q9BX51 225 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 C12orf49Q9H741 205 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 ARL2-SNX15V9GYD0 113 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 PCNX2A6NKB5 2137 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 TRBV20OR9-2A0A075B6H5 130 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 SCO2A0A1W2PP80 73 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 PRSS46E5RG02 174 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 NUPR1O60356 82 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 MT-CO2P00403 227 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 VDAC2P45880 294 aaPredicted RBP10.1□□□□□ -0.79
CPSF7-218ENST00000537641 GABRA2P47869 451 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 ZNF90Q03938 601 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 TMEM183BQ1AE95 376 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 SPINK9Q5DT21 86 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 GCSAMLQ5JQS6 135 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 PRAMEF5Q5TYX0 476 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 PRAMEF6Q5VXH4 476 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 TREML4Q6UXN2 200 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 ACP7Q6ZNF0 438 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 MGST2Q99735 147 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 ATG101Q9BSB4 218 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 CXXC4Q9H2H0 198 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 TP53TG3Q9ULZ0 132 aa10.1□□□□□ -0.79
CPSF7-218ENST00000537641 FREM2Q5SZK8 3169 aa10.09□□□□□ -0.79
CPSF7-218ENST00000537641 TRGV10A0A0A0MS01 117 aa10.09□□□□□ -0.79
CPSF7-218ENST00000537641 TRGV8A0A0C4DH27 118 aa10.09□□□□□ -0.79
CPSF7-218ENST00000537641 PGPEP1LA6NFU8 196 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms