RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 ARFRP1Q13795 201 aa6.78□□□□□ -1.32
SMAD3-203ENST00000537194 ARL6IP1Q15041 203 aa6.78□□□□□ -1.32
SMAD3-203ENST00000537194 SSX1Q16384 188 aa6.78□□□□□ -1.32
SMAD3-203ENST00000537194 CD300EQ496F6 205 aaPredicted RBP6.78□□□□□ -1.32
SMAD3-203ENST00000537194 FAM106AQ4KMX7 169 aa6.78□□□□□ -1.32
SMAD3-203ENST00000537194 LIPKQ5VXJ0 399 aa6.78□□□□□ -1.32
SMAD3-203ENST00000537194 TMEM203Q969S6 136 aa6.78□□□□□ -1.32
SMAD3-203ENST00000537194 FAM3DQ96BQ1 224 aa6.78□□□□□ -1.32
SMAD3-203ENST00000537194 TSC22D3Q99576 134 aa6.78□□□□□ -1.32
SMAD3-203ENST00000537194 FAM110AQ9BQ89 295 aa6.78□□□□□ -1.32
SMAD3-203ENST00000537194 RETNQ9HD89 108 aa6.78□□□□□ -1.32
SMAD3-203ENST00000537194 AK6Q9Y3D8 172 aaKnown RBP6.78□□□□□ -1.32
SMAD3-203ENST00000537194 TRBV6-7A0A0A0MS04 114 aa6.77□□□□□ -1.33
SMAD3-203ENST00000537194 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.77□□□□□ -1.33
SMAD3-203ENST00000537194 IZUMO1RA6ND01 250 aa6.77□□□□□ -1.33
SMAD3-203ENST00000537194 PDCD5O14737 125 aa6.77□□□□□ -1.33
SMAD3-203ENST00000537194 NOL3O60936 208 aaKnown RBP6.77□□□□□ -1.33
SMAD3-203ENST00000537194 PROP1O75360 226 aa6.77□□□□□ -1.33
SMAD3-203ENST00000537194 GABARAPO95166 117 aa6.77□□□□□ -1.33
SMAD3-203ENST00000537194 TRBV12-3P01733 135 aa6.77□□□□□ -1.33
SMAD3-203ENST00000537194 FCGR3AP08637 254 aa6.77□□□□□ -1.33
SMAD3-203ENST00000537194 CD36P16671 472 aa6.77□□□□□ -1.33
SMAD3-203ENST00000537194 TMEM50BP56557 158 aa6.77□□□□□ -1.33
SMAD3-203ENST00000537194 LINC00205P59089 165 aa6.77□□□□□ -1.33
SMAD3-203ENST00000537194 DEFA5Q01523 94 aa6.77□□□□□ -1.33
SMAD3-203ENST00000537194 IRF3Q14653 427 aa6.77□□□□□ -1.33
SMAD3-203ENST00000537194 CDK10Q15131 360 aa6.77□□□□□ -1.33
SMAD3-203ENST00000537194 DEFB114Q30KQ6 69 aa6.77□□□□□ -1.33
SMAD3-203ENST00000537194 C2orf76Q3KRA6 126 aa6.77□□□□□ -1.33
SMAD3-203ENST00000537194 OR4A47Q6IF82 309 aa6.77□□□□□ -1.33
SMAD3-203ENST00000537194 LINC00299Q6ZSB3 139 aa6.77□□□□□ -1.33
SMAD3-203ENST00000537194 DEFB125Q8N687 156 aa6.77□□□□□ -1.33
SMAD3-203ENST00000537194 VSTM2AQ8TAG5 236 aa6.77□□□□□ -1.33
SMAD3-203ENST00000537194 CYYR1Q96J86 154 aa6.77□□□□□ -1.33
SMAD3-203ENST00000537194 THAP7Q9BT49 309 aaPredicted RBP6.77□□□□□ -1.33
SMAD3-203ENST00000537194 CABLES2Q9BTV7 478 aa6.77□□□□□ -1.33
SMAD3-203ENST00000537194 ACOT13Q9NPJ3 140 aa6.77□□□□□ -1.33
SMAD3-203ENST00000537194 AKIP1Q9NQ31 210 aa6.77□□□□□ -1.33
SMAD3-203ENST00000537194 ZNF257Q9Y2Q1 563 aa6.77□□□□□ -1.33
SMAD3-203ENST00000537194 V9GY05 133 aa6.77□□□□□ -1.33
SMAD3-203ENST00000537194 A0A075B6Q4 140 aa6.76□□□□□ -1.33
SMAD3-203ENST00000537194 IGKV1-6A0A0C4DH72 117 aa6.76□□□□□ -1.33
SMAD3-203ENST00000537194 ZNF320A2RRD8 509 aa6.76□□□□□ -1.33
SMAD3-203ENST00000537194 CXorf65A6NEN9 183 aa6.76□□□□□ -1.33
SMAD3-203ENST00000537194 C2orf70A6NJV1 201 aa6.76□□□□□ -1.33
SMAD3-203ENST00000537194 BMPR1BO00238 502 aa6.76□□□□□ -1.33
SMAD3-203ENST00000537194 FCGR3BO75015 233 aa6.76□□□□□ -1.33
SMAD3-203ENST00000537194 OR2J3O76001 311 aa6.76□□□□□ -1.33
SMAD3-203ENST00000537194 NDUFB8O95169 186 aa6.76□□□□□ -1.33
SMAD3-203ENST00000537194 CD7P09564 240 aa6.76□□□□□ -1.33
SMAD3-203ENST00000537194 CTXN2P0C2S0 81 aa6.76□□□□□ -1.33
SMAD3-203ENST00000537194 CD37P11049 281 aa6.76□□□□□ -1.33
SMAD3-203ENST00000537194 FOLR2P14207 255 aa6.76□□□□□ -1.33
SMAD3-203ENST00000537194 CALRP27797 417 aaKnown RBP6.76□□□□□ -1.33
SMAD3-203ENST00000537194 DUTP33316 252 aaKnown RBP6.76□□□□□ -1.33
SMAD3-203ENST00000537194 KIR2DS2P43631 304 aa6.76□□□□□ -1.33
SMAD3-203ENST00000537194 NEDD8Q15843 81 aa6.76□□□□□ -1.33
SMAD3-203ENST00000537194 C15orf32Q32M92 178 aa6.76□□□□□ -1.33
SMAD3-203ENST00000537194 IGSF11Q5DX21 431 aa6.76□□□□□ -1.33
SMAD3-203ENST00000537194 ZNF57Q68EA5 555 aaPredicted RBP6.76□□□□□ -1.33
SMAD3-203ENST00000537194 IDO2Q6ZQW0 420 aa6.76□□□□□ -1.33
SMAD3-203ENST00000537194 ZNF367Q7RTV3 350 aa6.76□□□□□ -1.33
SMAD3-203ENST00000537194 TTC9CQ8N5M4 171 aa6.76□□□□□ -1.33
SMAD3-203ENST00000537194 OR52B4Q8NGK2 314 aa6.76□□□□□ -1.33
SMAD3-203ENST00000537194 AIFM2Q9BRQ8 373 aa6.76□□□□□ -1.33
SMAD3-203ENST00000537194 CCDC90BQ9GZT6 254 aa6.76□□□□□ -1.33
SMAD3-203ENST00000537194 ZNF430Q9H8G1 570 aaPredicted RBP6.76□□□□□ -1.33
SMAD3-203ENST00000537194 ZNF230Q9UIE0 474 aaPredicted RBP6.76□□□□□ -1.33
SMAD3-203ENST00000537194 ADAM30Q9UKF2 790 aa6.76□□□□□ -1.33
SMAD3-203ENST00000537194 BIRC6Q9NR09 4857 aa6.76□□□□□ -1.33
SMAD3-203ENST00000537194 LOC102724200A0A096LPH7 203 aaPredicted RBP6.75□□□□□ -1.33
SMAD3-203ENST00000537194 TRBV9A0A0B4J1U6 114 aa6.75□□□□□ -1.33
SMAD3-203ENST00000537194 RBMY1BA6NDE4 496 aaKnown RBP6.75□□□□□ -1.33
SMAD3-203ENST00000537194 RBMY1EA6NEQ0 496 aaKnown RBP6.75□□□□□ -1.33
SMAD3-203ENST00000537194 NUPR2A6NF83 97 aa6.75□□□□□ -1.33
SMAD3-203ENST00000537194 CCDC160A6NGH7 325 aa6.75□□□□□ -1.33
SMAD3-203ENST00000537194 SRRM4A7MD48 611 aaKnown RBP6.75□□□□□ -1.33
SMAD3-203ENST00000537194 H3BMQ9 156 aa6.75□□□□□ -1.33
SMAD3-203ENST00000537194 LGALS9O00182 355 aa6.75□□□□□ -1.33
SMAD3-203ENST00000537194 CYB5BO43169 146 aa6.75□□□□□ -1.33
SMAD3-203ENST00000537194 LY6G6CO95867 125 aa6.75□□□□□ -1.33
SMAD3-203ENST00000537194 PRH1P02810 166 aa6.75□□□□□ -1.33
SMAD3-203ENST00000537194 RBMY1DP0C7P1 496 aaKnown RBP6.75□□□□□ -1.33
SMAD3-203ENST00000537194 DEFA4P12838 97 aa6.75□□□□□ -1.33
SMAD3-203ENST00000537194 HIST1H1BP16401 226 aaKnown RBP6.75□□□□□ -1.33
SMAD3-203ENST00000537194 MYL9P24844 172 aa6.75□□□□□ -1.33
SMAD3-203ENST00000537194 MAS1LP35410 378 aa6.75□□□□□ -1.33
SMAD3-203ENST00000537194 ARL3P36405 182 aa6.75□□□□□ -1.33
SMAD3-203ENST00000537194 MECP2P51608 486 aaKnown RBP6.75□□□□□ -1.33
SMAD3-203ENST00000537194 CLDN12P56749 244 aa6.75□□□□□ -1.33
SMAD3-203ENST00000537194 SSBP2P81877 361 aaPredicted RBP6.75□□□□□ -1.33
SMAD3-203ENST00000537194 HES5Q5TA89 166 aa6.75□□□□□ -1.33
SMAD3-203ENST00000537194 LINC00322Q6ZN03 302 aaPredicted RBP6.75□□□□□ -1.33
SMAD3-203ENST00000537194 RBPMS2Q6ZRY4 209 aaKnown RBP6.75□□□□□ -1.33
SMAD3-203ENST00000537194 KCTD9Q7L273 389 aa6.75□□□□□ -1.33
SMAD3-203ENST00000537194 GPHB5Q86YW7 130 aa6.75□□□□□ -1.33
SMAD3-203ENST00000537194 CLVS1Q8IUQ0 354 aaPredicted RBP6.75□□□□□ -1.33
SMAD3-203ENST00000537194 SLC38A6Q8IZM9 456 aa6.75□□□□□ -1.33
SMAD3-203ENST00000537194 OR10R2Q8NGX6 335 aa6.75□□□□□ -1.33
SMAD3-203ENST00000537194 OR4S2Q8NH73 311 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms