RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 SFTPA1Q8IWL2 248 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 FNDC4Q9H6D8 234 aaPredicted RBP4.61□□□□□ -1.67
PTPRD-213ENST00000537002 VSIRQ9H7M9 311 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 SAP30LQ9HAJ7 183 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 ZNF355PQ9NSJ1 428 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 RFNGQ9Y644 331 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 GFRA3O60609 400 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 TSPOP30536 169 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 TRA2AQ13595 282 aaKnown RBP eCLIP4.61□□□□□ -1.67
PTPRD-213ENST00000537002 PARM1Q6UWI2 310 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 LINC00596Q86U02 117 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 MRGPRX1Q96LB2 322 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 Q96M66 194 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 CYC1P08574 325 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 LINC00869P0C866 280 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 ARL14EPLP0DKL9 152 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 ATP5G3P48201 142 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 SMIM21Q3B7S5 101 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 STPG1Q5TH74 334 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 PDPNQ86YL7 162 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 TMEM116Q8NCL8 245 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 OR2V2Q96R30 315 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 GNB4Q9HAV0 340 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 TDRD6O60522 2096 aaKnown RBP4.61□□□□□ -1.67
PTPRD-213ENST00000537002 EML2O95834 649 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 CELA2BP08218 269 aaPredicted RBP4.61□□□□□ -1.67
PTPRD-213ENST00000537002 MYF5P13349 255 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 ZNF841Q6ZN19 808 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 ZBTB34Q8NCN2 500 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 OR1B1Q8NGR6 318 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 RNASE8Q8TDE3 154 aaKnown RBP4.61□□□□□ -1.67
PTPRD-213ENST00000537002 GATAD1Q8WUU5 269 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 TMEM70Q9BUB7 260 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 CST9LQ9H4G1 147 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 VWA8A3KMH1 1905 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 IGHV2-26A0A0B4J1V2 119 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 C9JCJ5 164 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 CISD3P0C7P0 127 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 C1QTNF9P0C862 333 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 LYRM7Q5U5X0 104 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 CLEC2AQ6UVW9 174 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 TMEM136Q6ZRR5 245 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 CALHM1Q8IU99 346 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 RTN4RQ9BZR6 473 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 DENND4CQ5VZ89 1909 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 RBP4P02753 201 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 SCGB1D4Q6XE38 83 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 LINC00696Q6ZRV3 163 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 GUCD1Q96NT3 240 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 C1RLQ9NZP8 487 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 PPIAL4AQ9Y536 164 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 C1QTNF9BB2RNN3 333 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 CD5LO43866 347 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 GNG3P63215 75 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 CFAP161Q6P656 301 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 RPS19BP1Q86WX3 136 aaKnown RBP4.6□□□□□ -1.67
PTPRD-213ENST00000537002 SPACA9Q96E40 222 aaPredicted RBP4.6□□□□□ -1.67
PTPRD-213ENST00000537002 TMSB15BA0A087X1C1 80 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 KLF7O75840 302 aaPredicted RBP4.6□□□□□ -1.67
PTPRD-213ENST00000537002 CNIH1O95406 144 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 RPL15P61313 204 aaKnown RBP4.6□□□□□ -1.67
PTPRD-213ENST00000537002 AMMECR1LQ6DCA0 310 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 ASPHD2Q6ICH7 369 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 OCIAD1Q9NX40 245 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 PLA2G2EQ9NZK7 142 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 MMP17Q9ULZ9 603 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 ZG16O60844 167 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 GPX1P07203 203 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 COL8A1P27658 744 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 TEPPQ6URK8 271 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 SMRP1Q8NCR6 262 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 ANAPC1Q9H1A4 1944 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 C17orf51A8MQB3 221 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 FOXI3A8MTJ6 420 aaPredicted RBP4.6□□□□□ -1.67
PTPRD-213ENST00000537002 RBFOX2O43251 390 aaKnown RBP eCLIP4.6□□□□□ -1.67
PTPRD-213ENST00000537002 HBZP02008 142 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 CD33P20138 364 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 NPY1RP25929 384 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 CRYBB3P26998 211 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 TFF3Q07654 80 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 DOLPP1Q86YN1 238 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 TMEM45BQ96B21 275 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 PGLYRP4Q96LB8 373 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 C1orf147Q96MC9 270 aaPredicted RBP4.6□□□□□ -1.67
PTPRD-213ENST00000537002 MS4A6AQ9H2W1 248 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 VCX2Q9H322 139 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 C11orf1Q9H5F2 150 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 STAG3L2P0CL84 134 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 GPR6P46095 362 aaPredicted RBP4.6□□□□□ -1.67
PTPRD-213ENST00000537002 FOXA3P55318 350 aaPredicted RBP4.6□□□□□ -1.67
PTPRD-213ENST00000537002 SMAGPQ0VAQ4 97 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 IGFBP7Q16270 282 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 C10orf113Q5VZT2 155 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 C1QL2Q7Z5L3 287 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 TMEM256Q8N2U0 113 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 OR10X1Q8NGY0 326 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 LOXL4Q96JB6 756 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 DUSP23Q9BVJ7 150 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 WDR54Q9H977 334 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms