RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 GRIN2BQ13224 1484 aa2.33□□□□□ -2.04
PRKDC-208ENST00000536710 TMEM269A0A1B0GVZ9 245 aa2.33□□□□□ -2.04
PRKDC-208ENST00000536710 AHSA1O95433 338 aa2.33□□□□□ -2.04
PRKDC-208ENST00000536710 UCHL1P09936 223 aa2.33□□□□□ -2.04
PRKDC-208ENST00000536710 NKX2-5P52952 324 aaPredicted RBP2.33□□□□□ -2.04
PRKDC-208ENST00000536710 EMX1Q04741 257 aaPredicted RBP2.33□□□□□ -2.04
PRKDC-208ENST00000536710 FABP9Q0Z7S8 132 aa2.33□□□□□ -2.04
PRKDC-208ENST00000536710 LRRC75BQ2VPJ9 315 aa2.33□□□□□ -2.04
PRKDC-208ENST00000536710 SLC35E3Q7Z769 313 aa2.33□□□□□ -2.04
PRKDC-208ENST00000536710 ZNF283Q8N7M2 679 aa2.33□□□□□ -2.04
PRKDC-208ENST00000536710 SMCR5Q8TEV8 140 aa2.33□□□□□ -2.04
PRKDC-208ENST00000536710 ASB17Q8WXJ9 295 aa2.33□□□□□ -2.04
PRKDC-208ENST00000536710 GPR84Q9NQS5 396 aa2.33□□□□□ -2.04
PRKDC-208ENST00000536710 TMEM106BQ9NUM4 274 aa2.33□□□□□ -2.04
PRKDC-208ENST00000536710 MAP3K5Q99683 1374 aa2.33□□□□□ -2.04
PRKDC-208ENST00000536710 CACNA1SQ13698 1873 aa2.33□□□□□ -2.04
PRKDC-208ENST00000536710 NLRC5Q86WI3 1866 aa2.33□□□□□ -2.04
PRKDC-208ENST00000536710 SLIT2O94813 1529 aa2.32□□□□□ -2.04
PRKDC-208ENST00000536710 PEG3Q9GZU2 1588 aa2.32□□□□□ -2.04
PRKDC-208ENST00000536710 TRGV5A0A0B4J1U4 118 aa2.32□□□□□ -2.04
PRKDC-208ENST00000536710 OR4C45A6NMZ5 311 aa2.32□□□□□ -2.04
PRKDC-208ENST00000536710 H3BRN7 92 aa2.32□□□□□ -2.04
PRKDC-208ENST00000536710 CCL1P22362 96 aa2.32□□□□□ -2.04
PRKDC-208ENST00000536710 CD24P25063 80 aa2.32□□□□□ -2.04
PRKDC-208ENST00000536710 CCR2P41597 374 aa2.32□□□□□ -2.04
PRKDC-208ENST00000536710 PSMD8P48556 350 aa2.32□□□□□ -2.04
PRKDC-208ENST00000536710 FXYD7P58549 80 aa2.32□□□□□ -2.04
PRKDC-208ENST00000536710 FKBP1AP62942 108 aaKnown RBP2.32□□□□□ -2.04
PRKDC-208ENST00000536710 HIST2H3PS2Q5TEC6 136 aa2.32□□□□□ -2.04
PRKDC-208ENST00000536710 C8orf74Q6P047 294 aa2.32□□□□□ -2.04
PRKDC-208ENST00000536710 ZNF550Q7Z398 422 aa2.32□□□□□ -2.04
PRKDC-208ENST00000536710 GPR32P1Q8NGA4 272 aa2.32□□□□□ -2.04
PRKDC-208ENST00000536710 OR5J2Q8NH18 312 aa2.32□□□□□ -2.04
PRKDC-208ENST00000536710 ZNF675Q8TD23 568 aa2.32□□□□□ -2.04
PRKDC-208ENST00000536710 OPTNQ96CV9 577 aa2.32□□□□□ -2.04
PRKDC-208ENST00000536710 Q9BRP9 147 aa2.32□□□□□ -2.04
PRKDC-208ENST00000536710 FAM215AQ9Y5M1 114 aa2.32□□□□□ -2.04
PRKDC-208ENST00000536710 HMGXB3Q12766 1538 aa2.32□□□□□ -2.04
PRKDC-208ENST00000536710 SMARCA4P51532 1647 aa2.31□□□□□ -2.04
PRKDC-208ENST00000536710 HIVEP2P31629 2446 aa2.31□□□□□ -2.04
PRKDC-208ENST00000536710 KMT2EQ8IZD2 1858 aa2.31□□□□□ -2.04
PRKDC-208ENST00000536710 IGHV1-69-2A0A0G2JMI3 117 aa2.31□□□□□ -2.04
PRKDC-208ENST00000536710 J3QQQ9 107 aa2.31□□□□□ -2.04
PRKDC-208ENST00000536710 M0R036 132 aa2.31□□□□□ -2.04
PRKDC-208ENST00000536710 BHLHE40O14503 412 aa2.31□□□□□ -2.04
PRKDC-208ENST00000536710 FAM228BP0C875 321 aa2.31□□□□□ -2.04
PRKDC-208ENST00000536710 PEBP1P30086 187 aaKnown RBP2.31□□□□□ -2.04
PRKDC-208ENST00000536710 RPL26P61254 145 aaKnown RBP2.31□□□□□ -2.04
PRKDC-208ENST00000536710 AP1S1P61966 158 aa2.31□□□□□ -2.04
PRKDC-208ENST00000536710 RPL30P62888 115 aaKnown RBP2.31□□□□□ -2.04
PRKDC-208ENST00000536710 ERHP84090 104 aaKnown RBP2.31□□□□□ -2.04
PRKDC-208ENST00000536710 ACSM3Q53FZ2 586 aa2.31□□□□□ -2.04
PRKDC-208ENST00000536710 SLC22A24Q8N4F4 322 aa2.31□□□□□ -2.04
PRKDC-208ENST00000536710 TBC1D19Q8N5T2 526 aa2.31□□□□□ -2.04
PRKDC-208ENST00000536710 RNASE11Q8TAA1 199 aaKnown RBP2.31□□□□□ -2.04
PRKDC-208ENST00000536710 PARD6GQ9BYG4 376 aaPredicted RBP2.31□□□□□ -2.04
PRKDC-208ENST00000536710 RPL26L1Q9UNX3 145 aaKnown RBP2.31□□□□□ -2.04
PRKDC-208ENST00000536710 PRELID1Q9Y255 219 aa2.31□□□□□ -2.04
PRKDC-208ENST00000536710 NCAPD3P42695 1498 aa2.31□□□□□ -2.04
PRKDC-208ENST00000536710 ZNF638Q14966 1978 aaKnown RBP2.3□□□□□ -2.04
PRKDC-208ENST00000536710 DSCAML1Q8TD84 2053 aa2.3□□□□□ -2.04
PRKDC-208ENST00000536710 A0A0G2JQZ4 141 aa2.3□□□□□ -2.04
PRKDC-208ENST00000536710 RFPL4AA6NLU0 287 aa2.3□□□□□ -2.04
PRKDC-208ENST00000536710 RFPL4AL1F8VTS6 287 aa2.3□□□□□ -2.04
PRKDC-208ENST00000536710 KCNK1O00180 336 aa2.3□□□□□ -2.04
PRKDC-208ENST00000536710 OVOL1O14753 267 aa2.3□□□□□ -2.04
PRKDC-208ENST00000536710 IFI30P13284 250 aa2.3□□□□□ -2.04
PRKDC-208ENST00000536710 MARCKSL1P49006 195 aa2.3□□□□□ -2.04
PRKDC-208ENST00000536710 ZNF90Q03938 601 aa2.3□□□□□ -2.04
PRKDC-208ENST00000536710 PABPC1L2AQ5JQF8 200 aa2.3□□□□□ -2.04
PRKDC-208ENST00000536710 OR51T1Q8NGJ9 327 aa2.3□□□□□ -2.04
PRKDC-208ENST00000536710 SGMS2Q8NHU3 365 aa2.3□□□□□ -2.04
PRKDC-208ENST00000536710 CXCL16Q9H2A7 254 aa2.3□□□□□ -2.04
PRKDC-208ENST00000536710 AK3Q9UIJ7 227 aa2.3□□□□□ -2.04
PRKDC-208ENST00000536710 HHLA3Q9XRX5 114 aa2.3□□□□□ -2.04
PRKDC-208ENST00000536710 SAMHD1Q9Y3Z3 626 aaKnown RBP2.3□□□□□ -2.04
PRKDC-208ENST00000536710 THOC2Q8NI27 1593 aaKnown RBP2.3□□□□□ -2.04
PRKDC-208ENST00000536710 SMARCA2P51531 1590 aa2.29□□□□□ -2.04
PRKDC-208ENST00000536710 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.29□□□□□ -2.04
PRKDC-208ENST00000536710 TRAV41A0A0B4J266 112 aa2.29□□□□□ -2.04
PRKDC-208ENST00000536710 A0A1B0GW54 56 aa2.29□□□□□ -2.04
PRKDC-208ENST00000536710 ARRDC5A6NEK1 342 aa2.29□□□□□ -2.04
PRKDC-208ENST00000536710 PLA2G10O15496 165 aa2.29□□□□□ -2.04
PRKDC-208ENST00000536710 KLRC4O43908 158 aa2.29□□□□□ -2.04
PRKDC-208ENST00000536710 CA5AP35218 305 aa2.29□□□□□ -2.04
PRKDC-208ENST00000536710 RAB13P51153 203 aa2.29□□□□□ -2.04
PRKDC-208ENST00000536710 MYL6P60660 151 aa2.29□□□□□ -2.04
PRKDC-208ENST00000536710 AKR1C1Q04828 323 aa2.29□□□□□ -2.04
PRKDC-208ENST00000536710 MIAQ16674 131 aa2.29□□□□□ -2.04
PRKDC-208ENST00000536710 SFXN4Q6P4A7 337 aa2.29□□□□□ -2.04
PRKDC-208ENST00000536710 LHFPL5Q8TAF8 219 aa2.29□□□□□ -2.04
PRKDC-208ENST00000536710 ANGPT4Q9Y264 503 aa2.29□□□□□ -2.04
PRKDC-208ENST00000536710 DOCK6Q96HP0 2047 aa2.29□□□□□ -2.04
PRKDC-208ENST00000536710 LTBP2Q14767 1821 aa2.28□□□□□ -2.04
PRKDC-208ENST00000536710 KIF21AQ7Z4S6 1674 aa2.28□□□□□ -2.04
PRKDC-208ENST00000536710 BAZ1AQ9NRL2 1556 aaPredicted RBP2.28□□□□□ -2.04
PRKDC-208ENST00000536710 ADGRB3O60242 1522 aa2.28□□□□□ -2.04
PRKDC-208ENST00000536710 DHX57Q6P158 1386 aaKnown RBP2.28□□□□□ -2.04
PRKDC-208ENST00000536710 ABCC12Q96J65 1359 aa2.28□□□□□ -2.04
PRKDC-208ENST00000536710 TGIF2-C20orf24A0A0A6YYL0 155 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms