RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 HCFC1P51610 2035 aa13.3□□□□□ -0.28
CHMP1A-202ENST00000535997 TRAV20A0A0B4J274 112 aa13.29□□□□□ -0.28
CHMP1A-202ENST00000535997 TMPRSS3P57727 454 aa13.29□□□□□ -0.28
CHMP1A-202ENST00000535997 LOXL3P58215 753 aa13.29□□□□□ -0.28
CHMP1A-202ENST00000535997 PRAMEF5Q5TYX0 476 aa13.29□□□□□ -0.28
CHMP1A-202ENST00000535997 M0R1X1 148 aa13.29□□□□□ -0.28
CHMP1A-202ENST00000535997 IFNA10P01566 189 aa13.29□□□□□ -0.28
CHMP1A-202ENST00000535997 IGHV3-13P01766 116 aa13.29□□□□□ -0.28
CHMP1A-202ENST00000535997 WT1P19544 449 aaPredicted RBP13.29□□□□□ -0.28
CHMP1A-202ENST00000535997 GALR1P47211 349 aa13.29□□□□□ -0.28
CHMP1A-202ENST00000535997 TLE1Q04724 770 aa13.29□□□□□ -0.28
CHMP1A-202ENST00000535997 GCSAMQ8N6F7 178 aa13.29□□□□□ -0.28
CHMP1A-202ENST00000535997 OR4X1Q8NH49 305 aa13.29□□□□□ -0.28
CHMP1A-202ENST00000535997 GAB2Q9UQC2 676 aa13.29□□□□□ -0.28
CHMP1A-202ENST00000535997 NBEAQ8NFP9 2946 aa13.29□□□□□ -0.28
CHMP1A-202ENST00000535997 C11orf94C9JXX5 98 aa13.28□□□□□ -0.28
CHMP1A-202ENST00000535997 PDE6DO43924 150 aa13.28□□□□□ -0.28
CHMP1A-202ENST00000535997 ZNF134P52741 427 aa13.28□□□□□ -0.28
CHMP1A-202ENST00000535997 ERVK-16P61578 105 aa13.28□□□□□ -0.28
CHMP1A-202ENST00000535997 DNLZQ5SXM8 178 aa13.28□□□□□ -0.28
CHMP1A-202ENST00000535997 LURAP1LQ8IV03 231 aa13.28□□□□□ -0.28
CHMP1A-202ENST00000535997 S100PBPQ96BU1 408 aa13.28□□□□□ -0.28
CHMP1A-202ENST00000535997 S1PR3Q99500 378 aa13.28□□□□□ -0.28
CHMP1A-202ENST00000535997 NCOR1P1Q9H4R4 102 aa13.28□□□□□ -0.28
CHMP1A-202ENST00000535997 MBD3L4A6NDZ8 208 aaPredicted RBP13.28□□□□□ -0.28
CHMP1A-202ENST00000535997 MBD3L3A6NE82 208 aaPredicted RBP13.28□□□□□ -0.28
CHMP1A-202ENST00000535997 MBD3L5A6NJ08 208 aaPredicted RBP13.28□□□□□ -0.28
CHMP1A-202ENST00000535997 ITGB1BP1O14713 200 aa13.28□□□□□ -0.28
CHMP1A-202ENST00000535997 FTH1P19P0C7X4 201 aa13.28□□□□□ -0.28
CHMP1A-202ENST00000535997 KIR2DS2P43631 304 aa13.28□□□□□ -0.28
CHMP1A-202ENST00000535997 LRP11Q86VZ4 500 aa13.28□□□□□ -0.28
CHMP1A-202ENST00000535997 MBD3L2Q8NHZ7 208 aaPredicted RBP13.28□□□□□ -0.28
CHMP1A-202ENST00000535997 PLPPR2Q96GM1 343 aa13.28□□□□□ -0.28
CHMP1A-202ENST00000535997 HEYLQ9NQ87 328 aaPredicted RBP13.28□□□□□ -0.28
CHMP1A-202ENST00000535997 A0A1W2PPV4 95 aa13.27□□□□□ -0.28
CHMP1A-202ENST00000535997 PPP5D1E7EU14 171 aa13.27□□□□□ -0.28
CHMP1A-202ENST00000535997 HRASP01112 189 aa13.27□□□□□ -0.28
CHMP1A-202ENST00000535997 LHBP01229 141 aa13.27□□□□□ -0.28
CHMP1A-202ENST00000535997 OPRK1P41145 380 aa13.27□□□□□ -0.28
CHMP1A-202ENST00000535997 VDAC2P45880 294 aaPredicted RBP13.27□□□□□ -0.28
CHMP1A-202ENST00000535997 MSMPQ1L6U9 139 aa13.27□□□□□ -0.28
CHMP1A-202ENST00000535997 PDZD11Q5EBL8 140 aa13.27□□□□□ -0.28
CHMP1A-202ENST00000535997 SSX9Q7RTT3 188 aa13.27□□□□□ -0.28
CHMP1A-202ENST00000535997 ZNRF1Q8ND25 227 aa13.27□□□□□ -0.28
CHMP1A-202ENST00000535997 OR2V2Q96R30 315 aa13.27□□□□□ -0.28
CHMP1A-202ENST00000535997 SVILO95425 2214 aa13.27□□□□□ -0.29
CHMP1A-202ENST00000535997 GYPAP02724 150 aa13.27□□□□□ -0.29
CHMP1A-202ENST00000535997 RELBQ01201 579 aa13.27□□□□□ -0.29
CHMP1A-202ENST00000535997 RPL39P5Q59GN2 51 aa13.27□□□□□ -0.29
CHMP1A-202ENST00000535997 TIMM23BQ5SRD1 257 aa13.27□□□□□ -0.29
CHMP1A-202ENST00000535997 TREML4Q6UXN2 200 aa13.27□□□□□ -0.29
CHMP1A-202ENST00000535997 SEM1Q6ZVN7 128 aa13.27□□□□□ -0.29
CHMP1A-202ENST00000535997 IFI27L2Q9H2X8 130 aa13.27□□□□□ -0.29
CHMP1A-202ENST00000535997 RAB9BQ9NP90 201 aa13.27□□□□□ -0.29
CHMP1A-202ENST00000535997 CACNA1HO95180 2353 aa13.27□□□□□ -0.29
CHMP1A-202ENST00000535997 ZNF729A6NN14 1252 aaPredicted RBP13.26□□□□□ -0.29
CHMP1A-202ENST00000535997 GFRA3O60609 400 aa13.26□□□□□ -0.29
CHMP1A-202ENST00000535997 CGB3P0DN86 165 aa13.26□□□□□ -0.29
CHMP1A-202ENST00000535997 CGB7P0DN87 165 aa13.26□□□□□ -0.29
CHMP1A-202ENST00000535997 FABP4P15090 132 aa13.26□□□□□ -0.29
CHMP1A-202ENST00000535997 HIST1H1BP16401 226 aaKnown RBP13.26□□□□□ -0.29
CHMP1A-202ENST00000535997 NPPCP23582 126 aa13.26□□□□□ -0.29
CHMP1A-202ENST00000535997 GLRXP35754 106 aa13.26□□□□□ -0.29
CHMP1A-202ENST00000535997 RAB7AP51149 207 aa13.26□□□□□ -0.29
CHMP1A-202ENST00000535997 FAM3BP58499 235 aaPredicted RBP13.26□□□□□ -0.29
CHMP1A-202ENST00000535997 NECAP1Q8NC96 275 aa13.26□□□□□ -0.29
CHMP1A-202ENST00000535997 DEFB124Q8NES8 71 aa13.26□□□□□ -0.29
CHMP1A-202ENST00000535997 Q8TCH9 128 aa13.26□□□□□ -0.29
CHMP1A-202ENST00000535997 TXNDC17Q9BRA2 123 aa13.26□□□□□ -0.29
CHMP1A-202ENST00000535997 CADP27708 2225 aa13.26□□□□□ -0.29
CHMP1A-202ENST00000535997 TRAV38-1A0A0B4J264 116 aa13.25□□□□□ -0.29
CHMP1A-202ENST00000535997 PRSS46E5RG02 174 aa13.25□□□□□ -0.29
CHMP1A-202ENST00000535997 RRHO14718 337 aa13.25□□□□□ -0.29
CHMP1A-202ENST00000535997 GALR2O43603 387 aaPredicted RBP13.25□□□□□ -0.29
CHMP1A-202ENST00000535997 CRYAAP02489 173 aa13.25□□□□□ -0.29
CHMP1A-202ENST00000535997 DEFA4P12838 97 aa13.25□□□□□ -0.29
CHMP1A-202ENST00000535997 SRP14P37108 136 aaKnown RBP13.25□□□□□ -0.29
CHMP1A-202ENST00000535997 EDDM3BP56851 147 aa13.25□□□□□ -0.29
CHMP1A-202ENST00000535997 KLF3P57682 345 aaPredicted RBP13.25□□□□□ -0.29
CHMP1A-202ENST00000535997 DEFB109BQ30KR1 87 aa13.25□□□□□ -0.29
CHMP1A-202ENST00000535997 VKORC1L1Q8N0U8 176 aa13.25□□□□□ -0.29
CHMP1A-202ENST00000535997 ZNF383Q8NA42 475 aa13.25□□□□□ -0.29
CHMP1A-202ENST00000535997 DDB2Q92466 427 aa13.25□□□□□ -0.29
CHMP1A-202ENST00000535997 MEGF10Q96KG7 1140 aa13.25□□□□□ -0.29
CHMP1A-202ENST00000535997 PFDN5Q99471 154 aa13.25□□□□□ -0.29
CHMP1A-202ENST00000535997 ZFHX4Q86UP3 3567 aa13.25□□□□□ -0.29
CHMP1A-202ENST00000535997 IGHV3OR15-7A0A075B7D8 119 aa13.25□□□□□ -0.29
CHMP1A-202ENST00000535997 CEACAM4O75871 244 aa13.25□□□□□ -0.29
CHMP1A-202ENST00000535997 ZNF83P51522 516 aa13.25□□□□□ -0.29
CHMP1A-202ENST00000535997 GCSAMLQ5JQS6 135 aa13.25□□□□□ -0.29
CHMP1A-202ENST00000535997 MOGAT3Q86VF5 341 aa13.25□□□□□ -0.29
CHMP1A-202ENST00000535997 TMEM183AQ8IXX5 376 aa13.25□□□□□ -0.29
CHMP1A-202ENST00000535997 KCNIP2Q9NS61 270 aa13.25□□□□□ -0.29
CHMP1A-202ENST00000535997 TMEM140Q9NV12 185 aa13.25□□□□□ -0.29
CHMP1A-202ENST00000535997 CALYQ9NYX4 217 aa13.25□□□□□ -0.29
CHMP1A-202ENST00000535997 SPAARA0A1B0GVQ0 90 aa13.24□□□□□ -0.29
CHMP1A-202ENST00000535997 TMPRSS2O15393 492 aa13.24□□□□□ -0.29
CHMP1A-202ENST00000535997 CD99P14209 185 aa13.24□□□□□ -0.29
CHMP1A-202ENST00000535997 RTP5Q14D33 572 aa13.24□□□□□ -0.29
CHMP1A-202ENST00000535997 C3orf36Q3SXR2 165 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms