RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 CBX3Q13185 183 aa8.45□□□□□ -1.06
CLSTN3-206ENST00000535668 RAB11BQ15907 218 aa8.45□□□□□ -1.06
CLSTN3-206ENST00000535668 CD300EQ496F6 205 aaPredicted RBP8.45□□□□□ -1.06
CLSTN3-206ENST00000535668 IGSF11Q5DX21 431 aa8.45□□□□□ -1.06
CLSTN3-206ENST00000535668 SLC25A42Q86VD7 318 aa8.45□□□□□ -1.06
CLSTN3-206ENST00000535668 WFDC3Q8IUB2 231 aa8.45□□□□□ -1.06
CLSTN3-206ENST00000535668 MMD2Q8IY49 270 aa8.45□□□□□ -1.06
CLSTN3-206ENST00000535668 UFD1Q92890 307 aa8.45□□□□□ -1.06
CLSTN3-206ENST00000535668 RAB3CQ96E17 227 aa8.45□□□□□ -1.06
CLSTN3-206ENST00000535668 OR2D2Q9H210 308 aa8.45□□□□□ -1.06
CLSTN3-206ENST00000535668 TUBA4BQ9H853 241 aa8.45□□□□□ -1.06
CLSTN3-206ENST00000535668 ZNF355PQ9NSJ1 428 aa8.45□□□□□ -1.06
CLSTN3-206ENST00000535668 GAR1Q9NY12 217 aaKnown RBP8.45□□□□□ -1.06
CLSTN3-206ENST00000535668 SLC2A8Q9NY64 477 aa8.45□□□□□ -1.06
CLSTN3-206ENST00000535668 PTTG2Q9NZH5 202 aa8.45□□□□□ -1.06
CLSTN3-206ENST00000535668 ZNF257Q9Y2Q1 563 aa8.45□□□□□ -1.06
CLSTN3-206ENST00000535668 V9GY05 133 aa8.45□□□□□ -1.06
CLSTN3-206ENST00000535668 RBMY1BA6NDE4 496 aaKnown RBP8.44□□□□□ -1.06
CLSTN3-206ENST00000535668 RBMY1EA6NEQ0 496 aaKnown RBP8.44□□□□□ -1.06
CLSTN3-206ENST00000535668 LINC00473A8K010 186 aa8.44□□□□□ -1.06
CLSTN3-206ENST00000535668 NPIPB5A8MRT5 1133 aa8.44□□□□□ -1.06
CLSTN3-206ENST00000535668 TPPPO94811 219 aa8.44□□□□□ -1.06
CLSTN3-206ENST00000535668 HLA-DQB1P01920 261 aa8.44□□□□□ -1.06
CLSTN3-206ENST00000535668 CTXN2P0C2S0 81 aa8.44□□□□□ -1.06
CLSTN3-206ENST00000535668 RBMY1DP0C7P1 496 aaKnown RBP8.44□□□□□ -1.06
CLSTN3-206ENST00000535668 GSTT2P0CG29 244 aa8.44□□□□□ -1.06
CLSTN3-206ENST00000535668 GSTT2BP0CG30 244 aa8.44□□□□□ -1.06
CLSTN3-206ENST00000535668 SMIM18P0DKX4 95 aa8.44□□□□□ -1.06
CLSTN3-206ENST00000535668 DTYMKP23919 212 aa8.44□□□□□ -1.06
CLSTN3-206ENST00000535668 CALRP27797 417 aaKnown RBP8.44□□□□□ -1.06
CLSTN3-206ENST00000535668 PSMB6P28072 239 aa8.44□□□□□ -1.06
CLSTN3-206ENST00000535668 MAS1LP35410 378 aa8.44□□□□□ -1.06
CLSTN3-206ENST00000535668 MAP2K4P45985 399 aa8.44□□□□□ -1.06
CLSTN3-206ENST00000535668 RHOGP84095 191 aa8.44□□□□□ -1.06
CLSTN3-206ENST00000535668 EIF4EBP1Q13541 118 aaPredicted RBP8.44□□□□□ -1.06
CLSTN3-206ENST00000535668 CDK10Q15131 360 aa8.44□□□□□ -1.06
CLSTN3-206ENST00000535668 MSMO1Q15800 293 aa8.44□□□□□ -1.06
CLSTN3-206ENST00000535668 LIPKQ5VXJ0 399 aa8.44□□□□□ -1.06
CLSTN3-206ENST00000535668 LINC00299Q6ZSB3 139 aa8.44□□□□□ -1.06
CLSTN3-206ENST00000535668 OR10R2Q8NGX6 335 aa8.44□□□□□ -1.06
CLSTN3-206ENST00000535668 SETD6Q8TBK2 473 aa8.44□□□□□ -1.06
CLSTN3-206ENST00000535668 NEURL2Q9BR09 285 aa8.44□□□□□ -1.06
CLSTN3-206ENST00000535668 DCSTAMPQ9H295 470 aa8.44□□□□□ -1.06
CLSTN3-206ENST00000535668 ZNF430Q9H8G1 570 aaPredicted RBP8.44□□□□□ -1.06
CLSTN3-206ENST00000535668 PLGRKTQ9HBL7 147 aa8.44□□□□□ -1.06
CLSTN3-206ENST00000535668 TMEM272A0A1B0GTI8 110 aa8.43□□□□□ -1.06
CLSTN3-206ENST00000535668 C2orf70A6NJV1 201 aa8.43□□□□□ -1.06
CLSTN3-206ENST00000535668 TUSC2O75896 110 aa8.43□□□□□ -1.06
CLSTN3-206ENST00000535668 IGLV2-14P01704 120 aa8.43□□□□□ -1.06
CLSTN3-206ENST00000535668 CD3GP09693 182 aa8.43□□□□□ -1.06
CLSTN3-206ENST00000535668 C8orf88P0DMB2 117 aa8.43□□□□□ -1.06
CLSTN3-206ENST00000535668 HIST1H1DP16402 221 aaKnown RBP8.43□□□□□ -1.06
CLSTN3-206ENST00000535668 ATP5G2Q06055 141 aa8.43□□□□□ -1.06
CLSTN3-206ENST00000535668 PRSS48Q7RTY5 328 aa8.43□□□□□ -1.06
CLSTN3-206ENST00000535668 PUSL1Q8N0Z8 303 aaKnown RBP8.43□□□□□ -1.06
CLSTN3-206ENST00000535668 ATP6V0BQ99437 205 aa8.43□□□□□ -1.06
CLSTN3-206ENST00000535668 SLC2A9Q9NRM0 540 aa8.43□□□□□ -1.06
CLSTN3-206ENST00000535668 SCN3BQ9NY72 215 aa8.43□□□□□ -1.06
CLSTN3-206ENST00000535668 COA4Q9NYJ1 87 aa8.43□□□□□ -1.06
CLSTN3-206ENST00000535668 ADAM30Q9UKF2 790 aa8.43□□□□□ -1.06
CLSTN3-206ENST00000535668 AK6Q9Y3D8 172 aaKnown RBP8.43□□□□□ -1.06
CLSTN3-206ENST00000535668 FRAS1Q86XX4 4008 aa8.43□□□□□ -1.06
CLSTN3-206ENST00000535668 KMT2AQ03164 3969 aa8.42□□□□□ -1.06
CLSTN3-206ENST00000535668 TRAV25A0A0B4J276 109 aa8.42□□□□□ -1.06
CLSTN3-206ENST00000535668 IFITM5A6NNB3 132 aa8.42□□□□□ -1.06
CLSTN3-206ENST00000535668 TEX22C9J3V5 150 aa8.42□□□□□ -1.06
CLSTN3-206ENST00000535668 GGCTO75223 188 aaKnown RBP8.42□□□□□ -1.06
CLSTN3-206ENST00000535668 ZNF735P0CB33 412 aa8.42□□□□□ -1.06
CLSTN3-206ENST00000535668 FOLR2P14207 255 aa8.42□□□□□ -1.06
CLSTN3-206ENST00000535668 GADD45AP24522 165 aa8.42□□□□□ -1.06
CLSTN3-206ENST00000535668 CD81P60033 236 aa8.42□□□□□ -1.06
CLSTN3-206ENST00000535668 MED22Q15528 200 aa8.42□□□□□ -1.06
CLSTN3-206ENST00000535668 C15orf32Q32M92 178 aa8.42□□□□□ -1.06
CLSTN3-206ENST00000535668 ZNF773Q6PK81 442 aa8.42□□□□□ -1.06
CLSTN3-206ENST00000535668 GPR141Q7Z602 305 aa8.42□□□□□ -1.06
CLSTN3-206ENST00000535668 CADM3Q8N126 398 aa8.42□□□□□ -1.06
CLSTN3-206ENST00000535668 ZNF645Q8N7E2 425 aa8.42□□□□□ -1.06
CLSTN3-206ENST00000535668 VSTM2AQ8TAG5 236 aa8.42□□□□□ -1.06
CLSTN3-206ENST00000535668 TMEM167AQ8TBQ9 72 aa8.42□□□□□ -1.06
CLSTN3-206ENST00000535668 FANCD2OSQ96PS1 177 aa8.42□□□□□ -1.06
CLSTN3-206ENST00000535668 FAM110AQ9BQ89 295 aa8.42□□□□□ -1.06
CLSTN3-206ENST00000535668 RSL24D1Q9UHA3 163 aaKnown RBP8.42□□□□□ -1.06
CLSTN3-206ENST00000535668 TP53TG1Q9Y2A0 90 aa8.42□□□□□ -1.06
CLSTN3-206ENST00000535668 TPRKBQ9Y3C4 175 aa8.42□□□□□ -1.06
CLSTN3-206ENST00000535668 OR2W1Q9Y3N9 320 aa8.42□□□□□ -1.06
CLSTN3-206ENST00000535668 OR11H12B2RN74 326 aa8.41□□□□□ -1.06
CLSTN3-206ENST00000535668 PTGES3LE9PB15 166 aa8.41□□□□□ -1.06
CLSTN3-206ENST00000535668 BET1O15155 118 aa8.41□□□□□ -1.06
CLSTN3-206ENST00000535668 NOL3O60936 208 aaKnown RBP8.41□□□□□ -1.06
CLSTN3-206ENST00000535668 CRYZL1O95825 349 aa8.41□□□□□ -1.06
CLSTN3-206ENST00000535668 IL6RP08887 468 aaPredicted RBP8.41□□□□□ -1.06
CLSTN3-206ENST00000535668 CD7P09564 240 aa8.41□□□□□ -1.06
CLSTN3-206ENST00000535668 SAA1P0DJI8 122 aaPredicted RBP8.41□□□□□ -1.06
CLSTN3-206ENST00000535668 CBLN1P23435 193 aa8.41□□□□□ -1.06
CLSTN3-206ENST00000535668 ELLP55199 621 aaPredicted RBP8.41□□□□□ -1.06
CLSTN3-206ENST00000535668 BRWD1-AS2P59051 145 aa8.41□□□□□ -1.06
CLSTN3-206ENST00000535668 RPS25P62851 125 aaKnown RBP8.41□□□□□ -1.06
CLSTN3-206ENST00000535668 MRPS15P82914 257 aaKnown RBP8.41□□□□□ -1.06
CLSTN3-206ENST00000535668 FABP5Q01469 135 aa8.41□□□□□ -1.06
CLSTN3-206ENST00000535668 ARFRP1Q13795 201 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms