RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 IGHV3-72A0A0B4J1Y9 119 aa18.5■□□□□ 0.55
RBFOX1-206ENST00000535565 FAM90A9PA6NNJ1 464 aa18.5■□□□□ 0.55
RBFOX1-206ENST00000535565 G3V3Q6 166 aa18.5■□□□□ 0.55
RBFOX1-206ENST00000535565 TIMM23O14925 209 aa18.5■□□□□ 0.55
RBFOX1-206ENST00000535565 S100A10P60903 97 aa18.5■□□□□ 0.55
RBFOX1-206ENST00000535565 Q5BKY6 102 aa18.5■□□□□ 0.55
RBFOX1-206ENST00000535565 SSX9Q7RTT3 188 aa18.5■□□□□ 0.55
RBFOX1-206ENST00000535565 COA4Q9NYJ1 87 aa18.5■□□□□ 0.55
RBFOX1-206ENST00000535565 MPC2O95563 127 aa18.49■□□□□ 0.55
RBFOX1-206ENST00000535565 RPS16P62249 146 aaKnown RBP18.49■□□□□ 0.55
RBFOX1-206ENST00000535565 RAB32Q13637 225 aa18.49■□□□□ 0.55
RBFOX1-206ENST00000535565 POU2AF1Q16633 256 aa18.49■□□□□ 0.55
RBFOX1-206ENST00000535565 IZUMO4Q1ZYL8 232 aa18.49■□□□□ 0.55
RBFOX1-206ENST00000535565 THAP6Q8TBB0 222 aa18.49■□□□□ 0.55
RBFOX1-206ENST00000535565 TMEM140Q9NV12 185 aa18.49■□□□□ 0.55
RBFOX1-206ENST00000535565 CD1BP29016 333 aa18.48■□□□□ 0.55
RBFOX1-206ENST00000535565 NKX2-1P43699 371 aaPredicted RBP18.48■□□□□ 0.55
RBFOX1-206ENST00000535565 Q6ZRM9 215 aa18.48■□□□□ 0.55
RBFOX1-206ENST00000535565 VKORC1L1Q8N0U8 176 aa18.48■□□□□ 0.55
RBFOX1-206ENST00000535565 MS4A7Q9GZW8 240 aaPredicted RBP18.48■□□□□ 0.55
RBFOX1-206ENST00000535565 TRAV14DV4A0A0A6YYC5 116 aa18.47■□□□□ 0.55
RBFOX1-206ENST00000535565 PITX3O75364 302 aa18.47■□□□□ 0.55
RBFOX1-206ENST00000535565 RLN2P04090 185 aa18.47■□□□□ 0.55
RBFOX1-206ENST00000535565 HABP2Q14520 560 aaPredicted RBP18.47■□□□□ 0.55
RBFOX1-206ENST00000535565 C11orf87Q6NUJ2 197 aa18.47■□□□□ 0.55
RBFOX1-206ENST00000535565 PIP4P2Q8N4L2 257 aa18.47■□□□□ 0.55
RBFOX1-206ENST00000535565 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.47■□□□□ 0.55
RBFOX1-206ENST00000535565 CREBBPQ92793 2442 aa18.47■□□□□ 0.55
RBFOX1-206ENST00000535565 CCDC168Q8NDH2 2452 aa18.47■□□□□ 0.55
RBFOX1-206ENST00000535565 CSMD1Q96PZ7 3565 aa18.47■□□□□ 0.55
RBFOX1-206ENST00000535565 IGHV3OR16-10A0A075B7F0 116 aa18.47■□□□□ 0.55
RBFOX1-206ENST00000535565 SMAD7O15105 426 aaKnown RBP18.47■□□□□ 0.55
RBFOX1-206ENST00000535565 ST8SIA3O43173 380 aa18.47■□□□□ 0.55
RBFOX1-206ENST00000535565 RBMXL2O75526 392 aaKnown RBP18.47■□□□□ 0.55
RBFOX1-206ENST00000535565 MBPP02686 304 aaPredicted RBP18.47■□□□□ 0.55
RBFOX1-206ENST00000535565 OR4A47Q6IF82 309 aa18.47■□□□□ 0.55
RBFOX1-206ENST00000535565 FOXRED2Q8IWF2 684 aa18.47■□□□□ 0.55
RBFOX1-206ENST00000535565 OR4A16Q8NH70 328 aa18.47■□□□□ 0.55
RBFOX1-206ENST00000535565 CFHR4Q92496 578 aa18.47■□□□□ 0.55
RBFOX1-206ENST00000535565 ITGB1BP2Q9UKP3 347 aa18.47■□□□□ 0.55
RBFOX1-206ENST00000535565 LSM5Q9Y4Y9 91 aaKnown RBP18.47■□□□□ 0.55
RBFOX1-206ENST00000535565 POMT1Q9Y6A1 747 aa18.47■□□□□ 0.55
RBFOX1-206ENST00000535565 FXYD6-FXYD2A0A087WZ82 144 aa18.46■□□□□ 0.55
RBFOX1-206ENST00000535565 IGHV4-38-2P0DP08 117 aa18.46■□□□□ 0.55
RBFOX1-206ENST00000535565 LGALS7P47929 136 aa18.46■□□□□ 0.55
RBFOX1-206ENST00000535565 RUSC1-AS1Q66K80 236 aa18.46■□□□□ 0.55
RBFOX1-206ENST00000535565 DYNAPQ8N1N2 210 aa18.46■□□□□ 0.55
RBFOX1-206ENST00000535565 CIARTQ8N365 385 aaPredicted RBP18.46■□□□□ 0.55
RBFOX1-206ENST00000535565 OR11H4Q8NGC9 324 aa18.46■□□□□ 0.55
RBFOX1-206ENST00000535565 VSTM2AQ8TAG5 236 aa18.46■□□□□ 0.55
RBFOX1-206ENST00000535565 C17orf50Q8WW18 174 aa18.46■□□□□ 0.55
RBFOX1-206ENST00000535565 ITPR3Q14573 2671 aa18.46■□□□□ 0.54
RBFOX1-206ENST00000535565 SRRM4A7MD48 611 aaKnown RBP18.45■□□□□ 0.54
RBFOX1-206ENST00000535565 SNAPC5O75971 98 aa18.45■□□□□ 0.54
RBFOX1-206ENST00000535565 VENTXO95231 258 aa18.45■□□□□ 0.54
RBFOX1-206ENST00000535565 AVPP01185 164 aa18.45■□□□□ 0.54
RBFOX1-206ENST00000535565 SLC25A4P12235 298 aa18.45■□□□□ 0.54
RBFOX1-206ENST00000535565 NKX2-5P52952 324 aaPredicted RBP18.45■□□□□ 0.54
RBFOX1-206ENST00000535565 PRSS54Q6PEW0 395 aa18.45■□□□□ 0.54
RBFOX1-206ENST00000535565 BRD3OSQ6XYD6 125 aa18.45■□□□□ 0.54
RBFOX1-206ENST00000535565 RBMXL1Q96E39 390 aaKnown RBP18.45■□□□□ 0.54
RBFOX1-206ENST00000535565 RNF5Q99942 180 aa18.45■□□□□ 0.54
RBFOX1-206ENST00000535565 MBD2Q9UBB5 411 aa18.45■□□□□ 0.54
RBFOX1-206ENST00000535565 FAM90A26D6RGX4 464 aa18.44■□□□□ 0.54
RBFOX1-206ENST00000535565 K7EPK0 472 aa18.44■□□□□ 0.54
RBFOX1-206ENST00000535565 WRBO00258 174 aa18.44■□□□□ 0.54
RBFOX1-206ENST00000535565 OR9G9P0C7N8 305 aa18.44■□□□□ 0.54
RBFOX1-206ENST00000535565 SAA1P0DJI8 122 aaPredicted RBP18.44■□□□□ 0.54
RBFOX1-206ENST00000535565 ID3Q02535 119 aa18.44■□□□□ 0.54
RBFOX1-206ENST00000535565 VMA21Q3ZAQ7 101 aa18.44■□□□□ 0.54
RBFOX1-206ENST00000535565 CXorf66Q5JRM2 361 aaPredicted RBP18.44■□□□□ 0.54
RBFOX1-206ENST00000535565 FAM71E2Q8N5Q1 922 aa18.44■□□□□ 0.54
RBFOX1-206ENST00000535565 AJUBAQ96IF1 538 aa18.44■□□□□ 0.54
RBFOX1-206ENST00000535565 TSNAXQ99598 290 aaKnown RBP18.44■□□□□ 0.54
RBFOX1-206ENST00000535565 BET1LQ9NYM9 111 aa18.44■□□□□ 0.54
RBFOX1-206ENST00000535565 CACFD1Q9UGQ2 172 aa18.44■□□□□ 0.54
RBFOX1-206ENST00000535565 DEDDO75618 318 aa18.43■□□□□ 0.54
RBFOX1-206ENST00000535565 NXPH3O95157 252 aa18.43■□□□□ 0.54
RBFOX1-206ENST00000535565 PAX6P26367 422 aa18.43■□□□□ 0.54
RBFOX1-206ENST00000535565 BRS3P32247 399 aa18.43■□□□□ 0.54
RBFOX1-206ENST00000535565 BPIFB3P59826 476 aa18.43■□□□□ 0.54
RBFOX1-206ENST00000535565 NSG2Q9Y328 171 aa18.43■□□□□ 0.54
RBFOX1-206ENST00000535565 HMSDA8MTL9 139 aa18.42■□□□□ 0.54
RBFOX1-206ENST00000535565 MOSP00540 346 aa18.42■□□□□ 0.54
RBFOX1-206ENST00000535565 IGKV1D-33P01593 117 aa18.42■□□□□ 0.54
RBFOX1-206ENST00000535565 IGKV1-33P01594 117 aa18.42■□□□□ 0.54
RBFOX1-206ENST00000535565 RELBQ01201 579 aa18.42■□□□□ 0.54
RBFOX1-206ENST00000535565 KLF17Q5JT82 389 aaPredicted RBP18.42■□□□□ 0.54
RBFOX1-206ENST00000535565 ZNF546Q86UE3 836 aa18.42■□□□□ 0.54
RBFOX1-206ENST00000535565 PUSL1Q8N0Z8 303 aaKnown RBP18.42■□□□□ 0.54
RBFOX1-206ENST00000535565 OR4A5Q8NH83 315 aa18.42■□□□□ 0.54
RBFOX1-206ENST00000535565 GRPEL2Q8TAA5 225 aa18.42■□□□□ 0.54
RBFOX1-206ENST00000535565 DCUN1D4Q92564 292 aa18.42■□□□□ 0.54
RBFOX1-206ENST00000535565 FAM96BQ9Y3D0 163 aa18.42■□□□□ 0.54
RBFOX1-206ENST00000535565 KBTBD11O94819 623 aa18.42■□□□□ 0.54
RBFOX1-206ENST00000535565 PVALBP20472 110 aaPredicted RBP18.42■□□□□ 0.54
RBFOX1-206ENST00000535565 OR2B8PP59922 312 aa18.42■□□□□ 0.54
RBFOX1-206ENST00000535565 UBE2KP61086 200 aa18.42■□□□□ 0.54
RBFOX1-206ENST00000535565 HES1Q14469 280 aa18.42■□□□□ 0.54
RBFOX1-206ENST00000535565 OR2T10Q8NGZ9 312 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms