RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 CBX3Q13185 183 aa7.38□□□□□ -1.23
CSDE1-215ENST00000533818 TRPT1Q86TN4 253 aaKnown RBP7.38□□□□□ -1.23
CSDE1-215ENST00000533818 CYYR1Q96J86 154 aa7.38□□□□□ -1.23
CSDE1-215ENST00000533818 CXorf58Q96LI9 332 aa7.38□□□□□ -1.23
CSDE1-215ENST00000533818 CMTM3Q96MX0 182 aa7.38□□□□□ -1.23
CSDE1-215ENST00000533818 ZNF430Q9H8G1 570 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-215ENST00000533818 SMPXQ9UHP9 88 aa7.38□□□□□ -1.23
CSDE1-215ENST00000533818 LINC00588Q9Y4M8 146 aa7.38□□□□□ -1.23
CSDE1-215ENST00000533818 A0A1W2PPQ1 181 aa7.37□□□□□ -1.23
CSDE1-215ENST00000533818 TMEM189A5PLL7 270 aa7.37□□□□□ -1.23
CSDE1-215ENST00000533818 EDF1O60869 148 aaKnown RBP7.37□□□□□ -1.23
CSDE1-215ENST00000533818 BAG2O95816 211 aa7.37□□□□□ -1.23
CSDE1-215ENST00000533818 DHFRP00374 187 aa7.37□□□□□ -1.23
CSDE1-215ENST00000533818 HIST1H1BP16401 226 aaKnown RBP7.37□□□□□ -1.23
CSDE1-215ENST00000533818 GCSHP23434 173 aa7.37□□□□□ -1.23
CSDE1-215ENST00000533818 CEACAM6P40199 344 aa7.37□□□□□ -1.23
CSDE1-215ENST00000533818 CCR9P51686 369 aa7.37□□□□□ -1.23
CSDE1-215ENST00000533818 HMGN3Q15651 99 aa7.37□□□□□ -1.23
CSDE1-215ENST00000533818 AADACL4Q5VUY2 407 aa7.37□□□□□ -1.23
CSDE1-215ENST00000533818 NXNL2Q5VZ03 156 aa7.37□□□□□ -1.23
CSDE1-215ENST00000533818 WDR93Q6P2C0 686 aa7.37□□□□□ -1.23
CSDE1-215ENST00000533818 FDX2Q6P4F2 183 aa7.37□□□□□ -1.23
CSDE1-215ENST00000533818 EDARADDQ8WWZ3 215 aa7.37□□□□□ -1.23
CSDE1-215ENST00000533818 RHPN1-AS1Q9BWJ2 59 aa7.37□□□□□ -1.23
CSDE1-215ENST00000533818 ISG20L2Q9H9L3 353 aaKnown RBP7.37□□□□□ -1.23
CSDE1-215ENST00000533818 ZNF556Q9HAH1 456 aa7.37□□□□□ -1.23
CSDE1-215ENST00000533818 TEX48A0A1B0GUV7 120 aa7.36□□□□□ -1.23
CSDE1-215ENST00000533818 OR4C45A6NMZ5 311 aa7.36□□□□□ -1.23
CSDE1-215ENST00000533818 B2RBV5 119 aa7.36□□□□□ -1.23
CSDE1-215ENST00000533818 TEX22C9J3V5 150 aa7.36□□□□□ -1.23
CSDE1-215ENST00000533818 CHEK1O14757 476 aa7.36□□□□□ -1.23
CSDE1-215ENST00000533818 GLAP06280 429 aa7.36□□□□□ -1.23
CSDE1-215ENST00000533818 HTR1AP08908 422 aa7.36□□□□□ -1.23
CSDE1-215ENST00000533818 DEFA4P12838 97 aa7.36□□□□□ -1.23
CSDE1-215ENST00000533818 ERVFC1-1P60608 527 aa7.36□□□□□ -1.23
CSDE1-215ENST00000533818 TAGLNQ01995 201 aaKnown RBP7.36□□□□□ -1.23
CSDE1-215ENST00000533818 PLA2G7Q13093 441 aa7.36□□□□□ -1.23
CSDE1-215ENST00000533818 USF2Q15853 346 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-215ENST00000533818 FAM222AQ5U5X8 452 aa7.36□□□□□ -1.23
CSDE1-215ENST00000533818 GSG1LQ6UXU4 331 aa7.36□□□□□ -1.23
CSDE1-215ENST00000533818 ZNF502Q8TBZ5 544 aa7.36□□□□□ -1.23
CSDE1-215ENST00000533818 FYTTD1Q96QD9 318 aaKnown RBP7.36□□□□□ -1.23
CSDE1-215ENST00000533818 OR14A2Q96R54 314 aa7.36□□□□□ -1.23
CSDE1-215ENST00000533818 Q9H3A6 140 aa7.36□□□□□ -1.23
CSDE1-215ENST00000533818 TMBIM4Q9HC24 238 aa7.36□□□□□ -1.23
CSDE1-215ENST00000533818 DKK2Q9UBU2 259 aa7.36□□□□□ -1.23
CSDE1-215ENST00000533818 IGHV3-49A0A0A0MS15 119 aa7.35□□□□□ -1.23
CSDE1-215ENST00000533818 RPS10-NUDT3A0A1W2PQS6 291 aa7.35□□□□□ -1.23
CSDE1-215ENST00000533818 M0R129 80 aa7.35□□□□□ -1.23
CSDE1-215ENST00000533818 DNASE2O00115 360 aaPredicted RBP7.35□□□□□ -1.23
CSDE1-215ENST00000533818 NDUFA4O00483 81 aa7.35□□□□□ -1.23
CSDE1-215ENST00000533818 CREBL2O60519 120 aaPredicted RBP7.35□□□□□ -1.23
CSDE1-215ENST00000533818 NUDT3O95989 172 aa7.35□□□□□ -1.23
CSDE1-215ENST00000533818 P0C879 139 aa7.35□□□□□ -1.23
CSDE1-215ENST00000533818 ZNF93P35789 620 aaPredicted RBP7.35□□□□□ -1.23
CSDE1-215ENST00000533818 ATP6V1E1P36543 226 aa7.35□□□□□ -1.23
CSDE1-215ENST00000533818 SNRPGP62308 76 aaKnown RBP7.35□□□□□ -1.23
CSDE1-215ENST00000533818 GPR176Q14439 515 aa7.35□□□□□ -1.23
CSDE1-215ENST00000533818 RTL8BQ17RB0 113 aa7.35□□□□□ -1.23
CSDE1-215ENST00000533818 FAM90A2PQ658T7 463 aa7.35□□□□□ -1.23
CSDE1-215ENST00000533818 MMD2Q8IY49 270 aa7.35□□□□□ -1.23
CSDE1-215ENST00000533818 TMEM116Q8NCL8 245 aa7.35□□□□□ -1.23
CSDE1-215ENST00000533818 ELAC2Q9BQ52 826 aaKnown RBP7.35□□□□□ -1.23
CSDE1-215ENST00000533818 OR1A1Q9P1Q5 309 aa7.35□□□□□ -1.23
CSDE1-215ENST00000533818 IGHV7-4-1A0A0J9YVY3 117 aa7.34□□□□□ -1.23
CSDE1-215ENST00000533818 KNCNA6PVL3 124 aa7.34□□□□□ -1.23
CSDE1-215ENST00000533818 C15orf62A8K5M9 175 aa7.34□□□□□ -1.23
CSDE1-215ENST00000533818 CRYGCP07315 174 aa7.34□□□□□ -1.23
CSDE1-215ENST00000533818 IL6RP08887 468 aaPredicted RBP7.34□□□□□ -1.23
CSDE1-215ENST00000533818 HSD17B1P14061 328 aa7.34□□□□□ -1.23
CSDE1-215ENST00000533818 AREGP15514 252 aa7.34□□□□□ -1.23
CSDE1-215ENST00000533818 ZBTB25P24278 435 aa7.34□□□□□ -1.23
CSDE1-215ENST00000533818 ZNF85Q03923 595 aa7.34□□□□□ -1.23
CSDE1-215ENST00000533818 IRF3Q14653 427 aa7.34□□□□□ -1.23
CSDE1-215ENST00000533818 OXA1LQ15070 435 aa7.34□□□□□ -1.23
CSDE1-215ENST00000533818 ATP6AP1Q15904 470 aa7.34□□□□□ -1.23
CSDE1-215ENST00000533818 KLK9Q2XQG4 91 aa7.34□□□□□ -1.23
CSDE1-215ENST00000533818 SSX7Q7RTT5 188 aa7.34□□□□□ -1.23
CSDE1-215ENST00000533818 GID4Q8IVV7 300 aa7.34□□□□□ -1.23
CSDE1-215ENST00000533818 MFSD4AQ8N468 514 aa7.34□□□□□ -1.23
CSDE1-215ENST00000533818 FAM24BQ8N5W8 94 aa7.34□□□□□ -1.23
CSDE1-215ENST00000533818 PTX4Q96A99 478 aa7.34□□□□□ -1.23
CSDE1-215ENST00000533818 TMEM70Q9BUB7 260 aa7.34□□□□□ -1.23
CSDE1-215ENST00000533818 FNDC4Q9H6D8 234 aaPredicted RBP7.34□□□□□ -1.23
CSDE1-215ENST00000533818 TAS2R4Q9NYW5 299 aa7.34□□□□□ -1.23
CSDE1-215ENST00000533818 WARS2Q9UGM6 360 aaKnown RBP7.34□□□□□ -1.23
CSDE1-215ENST00000533818 KLK9Q9UKQ9 250 aa7.34□□□□□ -1.23
CSDE1-215ENST00000533818 IGLV11-55A0A075B6I3 123 aa7.33□□□□□ -1.24
CSDE1-215ENST00000533818 OR2T8A6NH00 312 aa7.33□□□□□ -1.24
CSDE1-215ENST00000533818 RRASP10301 218 aa7.33□□□□□ -1.24
CSDE1-215ENST00000533818 PTBP1P26599 531 aaKnown RBP eCLIP7.33□□□□□ -1.24
CSDE1-215ENST00000533818 MAS1LP35410 378 aa7.33□□□□□ -1.24
CSDE1-215ENST00000533818 CLINT1Q14677 625 aa7.33□□□□□ -1.24
CSDE1-215ENST00000533818 CDK10Q15131 360 aa7.33□□□□□ -1.24
CSDE1-215ENST00000533818 DDI2Q5TDH0 399 aa7.33□□□□□ -1.24
CSDE1-215ENST00000533818 SIGIRRQ6IA17 410 aa7.33□□□□□ -1.24
CSDE1-215ENST00000533818 Q6ZRN7 208 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-215ENST00000533818 TCF24Q7RTU0 167 aa7.33□□□□□ -1.24
CSDE1-215ENST00000533818 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-215ENST00000533818 IL4I1Q96RQ9 567 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms