RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 ERVK-16P61578 105 aa15.93■□□□□ 0.14
UBXN1-215ENST00000533476 SPINK9Q5DT21 86 aa15.93■□□□□ 0.14
UBXN1-215ENST00000533476 RBMS3Q6XE24 437 aaKnown RBP15.93■□□□□ 0.14
UBXN1-215ENST00000533476 CISD2Q8N5K1 135 aaKnown RBP15.93■□□□□ 0.14
UBXN1-215ENST00000533476 DDB2Q92466 427 aa15.93■□□□□ 0.14
UBXN1-215ENST00000533476 S1PR3Q99500 378 aa15.93■□□□□ 0.14
UBXN1-215ENST00000533476 CACNA1AO00555 2505 aa15.92■□□□□ 0.14
UBXN1-215ENST00000533476 ZFP92A6NM28 416 aa15.92■□□□□ 0.14
UBXN1-215ENST00000533476 C15orf62A8K5M9 175 aa15.92■□□□□ 0.14
UBXN1-215ENST00000533476 MBP02144 154 aa15.92■□□□□ 0.14
UBXN1-215ENST00000533476 SPCS3P61009 180 aa15.92■□□□□ 0.14
UBXN1-215ENST00000533476 PDLIM3Q53GG5 364 aaPredicted RBP15.92■□□□□ 0.14
UBXN1-215ENST00000533476 TEX36Q5VZQ5 186 aa15.92■□□□□ 0.14
UBXN1-215ENST00000533476 FAM90A2PQ658T7 463 aa15.92■□□□□ 0.14
UBXN1-215ENST00000533476 ACSM6Q6P461 480 aa15.92■□□□□ 0.14
UBXN1-215ENST00000533476 DUX4L9Q6RFH8 374 aaPredicted RBP15.92■□□□□ 0.14
UBXN1-215ENST00000533476 ZNF788Q6ZQV5 615 aa15.92■□□□□ 0.14
UBXN1-215ENST00000533476 OR52E5Q8NH55 327 aa15.92■□□□□ 0.14
UBXN1-215ENST00000533476 SCNM1Q9BWG6 230 aa15.92■□□□□ 0.14
UBXN1-215ENST00000533476 DSCAMO60469 2012 aa15.92■□□□□ 0.14
UBXN1-215ENST00000533476 ZNF727A8MUV8 499 aa15.92■□□□□ 0.14
UBXN1-215ENST00000533476 IFNA1P01562 189 aa15.92■□□□□ 0.14
UBXN1-215ENST00000533476 IGKV1D-33P01593 117 aa15.92■□□□□ 0.14
UBXN1-215ENST00000533476 IGKV1-33P01594 117 aa15.92■□□□□ 0.14
UBXN1-215ENST00000533476 IGHV3-7P01780 117 aa15.92■□□□□ 0.14
UBXN1-215ENST00000533476 NQO2P16083 231 aa15.92■□□□□ 0.14
UBXN1-215ENST00000533476 MDKP21741 143 aaPredicted RBP15.92■□□□□ 0.14
UBXN1-215ENST00000533476 RPS10P46783 165 aaKnown RBP15.92■□□□□ 0.14
UBXN1-215ENST00000533476 TCF23Q7RTU1 214 aa15.92■□□□□ 0.14
UBXN1-215ENST00000533476 RPP25LQ8N5L8 163 aaKnown RBP15.92■□□□□ 0.14
UBXN1-215ENST00000533476 OR4A16Q8NH70 328 aa15.92■□□□□ 0.14
UBXN1-215ENST00000533476 TMPRSS5Q9H3S3 457 aa15.92■□□□□ 0.14
UBXN1-215ENST00000533476 LINC00574Q9H8X3 128 aa15.92■□□□□ 0.14
UBXN1-215ENST00000533476 JKAMPQ9P055 326 aa15.92■□□□□ 0.14
UBXN1-215ENST00000533476 RAI1Q7Z5J4 1906 aaPredicted RBP15.92■□□□□ 0.14
UBXN1-215ENST00000533476 CHD8Q9HCK8 2581 aa15.92■□□□□ 0.14
UBXN1-215ENST00000533476 DSCAML1Q8TD84 2053 aa15.91■□□□□ 0.14
UBXN1-215ENST00000533476 IRF2P14316 349 aa15.91■□□□□ 0.14
UBXN1-215ENST00000533476 HOXA5P20719 270 aa15.91■□□□□ 0.14
UBXN1-215ENST00000533476 TMEM30BQ3MIR4 351 aa15.91■□□□□ 0.14
UBXN1-215ENST00000533476 CT45A1Q5HYN5 189 aa15.91■□□□□ 0.14
UBXN1-215ENST00000533476 UTF1Q5T230 341 aa15.91■□□□□ 0.14
UBXN1-215ENST00000533476 GFRALQ6UXV0 394 aa15.91■□□□□ 0.14
UBXN1-215ENST00000533476 SSX8Q7RTT4 187 aa15.91■□□□□ 0.14
UBXN1-215ENST00000533476 WFDC8Q8IUA0 241 aa15.91■□□□□ 0.14
UBXN1-215ENST00000533476 OR13D1Q8NGV5 346 aa15.91■□□□□ 0.14
UBXN1-215ENST00000533476 OR4S2Q8NH73 311 aa15.91■□□□□ 0.14
UBXN1-215ENST00000533476 CT45A3Q8NHU0 189 aa15.91■□□□□ 0.14
UBXN1-215ENST00000533476 NANPQ8TBE9 248 aa15.91■□□□□ 0.14
UBXN1-215ENST00000533476 Q8WTZ3 238 aa15.91■□□□□ 0.14
UBXN1-215ENST00000533476 CA5BP1Q8WTZ4 195 aa15.91■□□□□ 0.14
UBXN1-215ENST00000533476 DIRC2Q96SL1 478 aa15.91■□□□□ 0.14
UBXN1-215ENST00000533476 NPCDR1Q9BY65 106 aa15.91■□□□□ 0.14
UBXN1-215ENST00000533476 SLC39A9Q9NUM3 307 aa15.91■□□□□ 0.14
UBXN1-215ENST00000533476 VAX2Q9UIW0 290 aa15.91■□□□□ 0.14
UBXN1-215ENST00000533476 ZNF835Q9Y2P0 537 aa15.91■□□□□ 0.14
UBXN1-215ENST00000533476 ZNF729A6NN14 1252 aaPredicted RBP15.9■□□□□ 0.14
UBXN1-215ENST00000533476 TGOLN2O43493 480 aa15.9■□□□□ 0.14
UBXN1-215ENST00000533476 TFF3Q07654 80 aa15.9■□□□□ 0.14
UBXN1-215ENST00000533476 SSX9Q7RTT3 188 aa15.9■□□□□ 0.14
UBXN1-215ENST00000533476 DEFB108BQ8NET1 73 aa15.9■□□□□ 0.14
UBXN1-215ENST00000533476 LEAP2Q969E1 77 aa15.9■□□□□ 0.14
UBXN1-215ENST00000533476 CCL13Q99616 98 aa15.9■□□□□ 0.14
UBXN1-215ENST00000533476 TANC2Q9HCD6 1990 aa15.9■□□□□ 0.14
UBXN1-215ENST00000533476 SAA2-SAA4A0A096LPE2 208 aa15.9■□□□□ 0.14
UBXN1-215ENST00000533476 DPRXA6NFQ7 191 aa15.9■□□□□ 0.14
UBXN1-215ENST00000533476 GYPAP02724 150 aa15.9■□□□□ 0.14
UBXN1-215ENST00000533476 SAA2P0DJI9 122 aaPredicted RBP15.9■□□□□ 0.14
UBXN1-215ENST00000533476 RND2P52198 227 aa15.9■□□□□ 0.14
UBXN1-215ENST00000533476 RPP30P78346 268 aaKnown RBP15.9■□□□□ 0.14
UBXN1-215ENST00000533476 RELBQ01201 579 aa15.9■□□□□ 0.14
UBXN1-215ENST00000533476 KIAA0141Q14154 515 aaPredicted RBP15.9■□□□□ 0.14
UBXN1-215ENST00000533476 ADIPOQQ15848 244 aa15.9■□□□□ 0.14
UBXN1-215ENST00000533476 C1orf229Q6ZS94 237 aaPredicted RBP15.9■□□□□ 0.14
UBXN1-215ENST00000533476 SPACA3Q8IXA5 215 aa15.9■□□□□ 0.14
UBXN1-215ENST00000533476 FAM216BQ8N7L0 139 aa15.9■□□□□ 0.14
UBXN1-215ENST00000533476 ZNF439Q8NDP4 499 aa15.9■□□□□ 0.14
UBXN1-215ENST00000533476 CORO2AQ92828 525 aa15.9■□□□□ 0.14
UBXN1-215ENST00000533476 LHX4Q969G2 390 aa15.9■□□□□ 0.14
UBXN1-215ENST00000533476 TMEM140Q9NV12 185 aa15.9■□□□□ 0.14
UBXN1-215ENST00000533476 IDI2-AS1Q9NZ38 188 aa15.9■□□□□ 0.14
UBXN1-215ENST00000533476 CTXND1A0A1B0GTU2 59 aa15.89■□□□□ 0.13
UBXN1-215ENST00000533476 THBDP07204 575 aa15.89■□□□□ 0.13
UBXN1-215ENST00000533476 TNFRSF1AP19438 455 aa15.89■□□□□ 0.13
UBXN1-215ENST00000533476 THBS3P49746 956 aa15.89■□□□□ 0.13
UBXN1-215ENST00000533476 RPS16P62249 146 aaKnown RBP15.89■□□□□ 0.13
UBXN1-215ENST00000533476 RAB11AP62491 216 aa15.89■□□□□ 0.13
UBXN1-215ENST00000533476 TBR1Q16650 682 aa15.89■□□□□ 0.13
UBXN1-215ENST00000533476 SLC16A13Q7RTY0 426 aa15.89■□□□□ 0.13
UBXN1-215ENST00000533476 BOD1L1Q8NFC6 3051 aa15.88■□□□□ 0.13
UBXN1-215ENST00000533476 OR4A8P0C604 315 aa15.88■□□□□ 0.13
UBXN1-215ENST00000533476 VDAC2P45880 294 aaPredicted RBP15.88■□□□□ 0.13
UBXN1-215ENST00000533476 BSPH1Q075Z2 132 aa15.88■□□□□ 0.13
UBXN1-215ENST00000533476 FFAR4Q5NUL3 377 aa15.88■□□□□ 0.13
UBXN1-215ENST00000533476 VKORC1L1Q8N0U8 176 aa15.88■□□□□ 0.13
UBXN1-215ENST00000533476 ZNF709Q8N972 641 aa15.88■□□□□ 0.13
UBXN1-215ENST00000533476 ADTRPQ96IZ2 230 aa15.88■□□□□ 0.13
UBXN1-215ENST00000533476 SDF2L1Q9HCN8 221 aa15.88■□□□□ 0.13
UBXN1-215ENST00000533476 ANKRD11Q6UB99 2663 aaPredicted RBP15.88■□□□□ 0.13
UBXN1-215ENST00000533476 C17orf100A8MU93 164 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms