RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 RBFOX2O43251 390 aaKnown RBP eCLIP15.94■□□□□ 0.14
CCS-208ENST00000533244 KIR2DS2P43631 304 aa15.94■□□□□ 0.14
CCS-208ENST00000533244 PRSS8Q16651 343 aa15.94■□□□□ 0.14
CCS-208ENST00000533244 ACTBL2Q562R1 376 aa15.94■□□□□ 0.14
CCS-208ENST00000533244 SAMD5Q5TGI4 173 aa15.94■□□□□ 0.14
CCS-208ENST00000533244 LFNGQ8NES3 379 aa15.94■□□□□ 0.14
CCS-208ENST00000533244 ABHD5Q8WTS1 349 aa15.94■□□□□ 0.14
CCS-208ENST00000533244 A3GALT2U3KPV4 340 aa15.94■□□□□ 0.14
CCS-208ENST00000533244 A0A1W2PN81 502 aa15.94■□□□□ 0.14
CCS-208ENST00000533244 NUDT19A8MXV4 375 aa15.94■□□□□ 0.14
CCS-208ENST00000533244 PF4P02776 101 aa15.94■□□□□ 0.14
CCS-208ENST00000533244 CHRNA7P36544 502 aa15.94■□□□□ 0.14
CCS-208ENST00000533244 MRPS10P82664 201 aaKnown RBP15.94■□□□□ 0.14
CCS-208ENST00000533244 CATR1Q13166 79 aa15.94■□□□□ 0.14
CCS-208ENST00000533244 RNASE12Q5GAN4 147 aaKnown RBP15.94■□□□□ 0.14
CCS-208ENST00000533244 UNQ5815/PRO19632Q6UWF5 114 aa15.94■□□□□ 0.14
CCS-208ENST00000533244 IDO2Q6ZQW0 420 aa15.94■□□□□ 0.14
CCS-208ENST00000533244 LINC00482Q8N8I6 264 aa15.94■□□□□ 0.14
CCS-208ENST00000533244 P2RX4Q99571 388 aa15.94■□□□□ 0.14
CCS-208ENST00000533244 DCUN1D5Q9BTE7 237 aa15.94■□□□□ 0.14
CCS-208ENST00000533244 GABARAPH6UMI1 98 aa15.93■□□□□ 0.14
CCS-208ENST00000533244 ZNF701M0R085 212 aaPredicted RBP15.93■□□□□ 0.14
CCS-208ENST00000533244 RAB9AP51151 201 aa15.93■□□□□ 0.14
CCS-208ENST00000533244 SPAG16Q8N0X2 631 aa15.93■□□□□ 0.14
CCS-208ENST00000533244 PUSL1Q8N0Z8 303 aaKnown RBP15.93■□□□□ 0.14
CCS-208ENST00000533244 ZNF491Q8N8L2 437 aa15.93■□□□□ 0.14
CCS-208ENST00000533244 OR5M8Q8NGP6 311 aa15.93■□□□□ 0.14
CCS-208ENST00000533244 GRPEL2Q8TAA5 225 aa15.93■□□□□ 0.14
CCS-208ENST00000533244 C4orf3Q8WVX3 66 aa15.93■□□□□ 0.14
CCS-208ENST00000533244 UBE2E2Q96LR5 201 aa15.93■□□□□ 0.14
CCS-208ENST00000533244 C6orf62Q9GZU0 229 aaPredicted RBP15.93■□□□□ 0.14
CCS-208ENST00000533244 RABL2AQ9UBK7 228 aaPredicted RBP15.93■□□□□ 0.14
CCS-208ENST00000533244 RABL2BQ9UNT1 228 aa15.93■□□□□ 0.14
CCS-208ENST00000533244 CTDSPLO15194 276 aa15.92■□□□□ 0.14
CCS-208ENST00000533244 RAMP3O60896 148 aa15.92■□□□□ 0.14
CCS-208ENST00000533244 TBPP20226 339 aa15.92■□□□□ 0.14
CCS-208ENST00000533244 MYCNOSP40205 109 aa15.92■□□□□ 0.14
CCS-208ENST00000533244 TSPAN5P62079 268 aa15.92■□□□□ 0.14
CCS-208ENST00000533244 GNB1P62873 340 aa15.92■□□□□ 0.14
CCS-208ENST00000533244 DGCR2P98153 550 aa15.92■□□□□ 0.14
CCS-208ENST00000533244 ASPHD1Q5U4P2 390 aa15.92■□□□□ 0.14
CCS-208ENST00000533244 PYHIN1Q6K0P9 492 aa15.92■□□□□ 0.14
CCS-208ENST00000533244 TMEM65Q6PI78 240 aa15.92■□□□□ 0.14
CCS-208ENST00000533244 MRPL41Q8IXM3 137 aaKnown RBP15.92■□□□□ 0.14
CCS-208ENST00000533244 FCAMRQ8WWV6 532 aa15.92■□□□□ 0.14
CCS-208ENST00000533244 DIRAS2Q96HU8 199 aa15.92■□□□□ 0.14
CCS-208ENST00000533244 RAX2Q96IS3 184 aa15.92■□□□□ 0.14
CCS-208ENST00000533244 ZNF430Q9H8G1 570 aaPredicted RBP15.92■□□□□ 0.14
CCS-208ENST00000533244 G3V4G9 280 aa15.91■□□□□ 0.14
CCS-208ENST00000533244 M0QYG6 137 aa15.91■□□□□ 0.14
CCS-208ENST00000533244 PGLYRP1O75594 196 aaPredicted RBP15.91■□□□□ 0.14
CCS-208ENST00000533244 CNIH1O95406 144 aa15.91■□□□□ 0.14
CCS-208ENST00000533244 CD3DP04234 171 aa15.91■□□□□ 0.14
CCS-208ENST00000533244 UCP3P55916 312 aa15.91■□□□□ 0.14
CCS-208ENST00000533244 RUNX1Q01196 453 aa15.91■□□□□ 0.14
CCS-208ENST00000533244 SSBP1Q04837 148 aaKnown RBP15.91■□□□□ 0.14
CCS-208ENST00000533244 KPRPQ5T749 579 aaPredicted RBP15.91■□□□□ 0.14
CCS-208ENST00000533244 AADACL3Q5VUY0 350 aa15.91■□□□□ 0.14
CCS-208ENST00000533244 VKORC1L1Q8N0U8 176 aa15.91■□□□□ 0.14
CCS-208ENST00000533244 MCFD2Q8NI22 146 aa15.91■□□□□ 0.14
CCS-208ENST00000533244 VSTM2AQ8TAG5 236 aa15.91■□□□□ 0.14
CCS-208ENST00000533244 TMEM167AQ8TBQ9 72 aa15.91■□□□□ 0.14
CCS-208ENST00000533244 SMIM4Q8WVI0 70 aa15.91■□□□□ 0.14
CCS-208ENST00000533244 TMEM68Q96MH6 324 aa15.91■□□□□ 0.14
CCS-208ENST00000533244 SOSTQ9BQB4 213 aa15.91■□□□□ 0.14
CCS-208ENST00000533244 RSL24D1Q9UHA3 163 aaKnown RBP15.91■□□□□ 0.14
CCS-208ENST00000533244 CCDC160A6NGH7 325 aa15.9■□□□□ 0.14
CCS-208ENST00000533244 GPR31O00270 319 aa15.9■□□□□ 0.14
CCS-208ENST00000533244 CREBL2O60519 120 aaPredicted RBP15.9■□□□□ 0.14
CCS-208ENST00000533244 KBTBD11O94819 623 aa15.9■□□□□ 0.14
CCS-208ENST00000533244 HRASP01112 189 aa15.9■□□□□ 0.14
CCS-208ENST00000533244 CD74P04233 296 aa15.9■□□□□ 0.14
CCS-208ENST00000533244 CD33P20138 364 aa15.9■□□□□ 0.14
CCS-208ENST00000533244 POU2AF1Q16633 256 aa15.9■□□□□ 0.14
CCS-208ENST00000533244 BEAN1Q3B7T3 259 aa15.9■□□□□ 0.14
CCS-208ENST00000533244 RNASE10Q5GAN6 216 aaKnown RBP15.9■□□□□ 0.14
CCS-208ENST00000533244 LHFPL1Q86WI0 220 aa15.9■□□□□ 0.14
CCS-208ENST00000533244 MMD2Q8IY49 270 aa15.9■□□□□ 0.14
CCS-208ENST00000533244 ARRDC1Q8N5I2 433 aa15.9■□□□□ 0.14
CCS-208ENST00000533244 TMEM229BQ8NBD8 167 aa15.9■□□□□ 0.14
CCS-208ENST00000533244 OR51H1Q8NH63 302 aa15.9■□□□□ 0.14
CCS-208ENST00000533244 RHOVQ96L33 236 aa15.9■□□□□ 0.14
CCS-208ENST00000533244 TINAGL1Q9GZM7 467 aaPredicted RBP15.9■□□□□ 0.14
CCS-208ENST00000533244 GNB4Q9HAV0 340 aa15.9■□□□□ 0.14
CCS-208ENST00000533244 VSIG4Q9Y279 399 aa15.9■□□□□ 0.14
CCS-208ENST00000533244 I3L521 148 aa15.89■□□□□ 0.13
CCS-208ENST00000533244 CCL24O00175 119 aa15.89■□□□□ 0.13
CCS-208ENST00000533244 OR2A4O95047 310 aa15.89■□□□□ 0.13
CCS-208ENST00000533244 TNFSF8P32971 234 aa15.89■□□□□ 0.13
CCS-208ENST00000533244 FHL3Q13643 280 aa15.89■□□□□ 0.13
CCS-208ENST00000533244 TNXAQ16473 311 aa15.89■□□□□ 0.13
CCS-208ENST00000533244 LPCAT3Q6P1A2 487 aa15.89■□□□□ 0.13
CCS-208ENST00000533244 C1QL4Q86Z23 238 aa15.89■□□□□ 0.13
CCS-208ENST00000533244 CD300LFQ8TDQ1 290 aa15.89■□□□□ 0.13
CCS-208ENST00000533244 SRSF12Q8WXF0 261 aaKnown RBP15.89■□□□□ 0.13
CCS-208ENST00000533244 OR2A7Q96R45 310 aa15.89■□□□□ 0.13
CCS-208ENST00000533244 RSRP1Q9BUV0 290 aa15.89■□□□□ 0.13
CCS-208ENST00000533244 H3BUA1 57 aa15.88■□□□□ 0.13
CCS-208ENST00000533244 BRI3O95415 125 aa15.88■□□□□ 0.13
CCS-208ENST00000533244 HPRT1P00492 218 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms