RNA–Protein interactions for RNA: ENST00000533064.1

TRIM3-212, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 1,654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-212ENST00000533064 IL22RA2Q969J5 263 aa11.49□□□□□ -0.57
TRIM3-212ENST00000533064 MS4A7Q9GZW8 240 aaPredicted RBP11.49□□□□□ -0.57
TRIM3-212ENST00000533064 SLA2Q9H6Q3 261 aa11.49□□□□□ -0.57
TRIM3-212ENST00000533064 SLC35D1Q9NTN3 355 aa11.49□□□□□ -0.57
TRIM3-212ENST00000533064 TNCP24821 2201 aa11.49□□□□□ -0.57
TRIM3-212ENST00000533064 LINC00205P59089 165 aa11.49□□□□□ -0.57
TRIM3-212ENST00000533064 KRTAP1-1Q07627 177 aa11.49□□□□□ -0.57
TRIM3-212ENST00000533064 LDLRAD2Q5SZI1 272 aa11.49□□□□□ -0.57
TRIM3-212ENST00000533064 DHRS7BQ6IAN0 325 aaPredicted RBP11.49□□□□□ -0.57
TRIM3-212ENST00000533064 SELENOHQ8IZQ5 122 aaKnown RBP11.49□□□□□ -0.57
TRIM3-212ENST00000533064 SLC35G3Q8N808 338 aa11.49□□□□□ -0.57
TRIM3-212ENST00000533064 OR5AN1Q8NGI8 311 aa11.49□□□□□ -0.57
TRIM3-212ENST00000533064 THAP6Q8TBB0 222 aa11.49□□□□□ -0.57
TRIM3-212ENST00000533064 DDB2Q92466 427 aa11.49□□□□□ -0.57
TRIM3-212ENST00000533064 MXRA5Q9NR99 2828 aa11.48□□□□□ -0.57
TRIM3-212ENST00000533064 HIVEP1P15822 2718 aa11.48□□□□□ -0.57
TRIM3-212ENST00000533064 A0A1W2PPI3 338 aa11.48□□□□□ -0.57
TRIM3-212ENST00000533064 H0YJW9 148 aa11.48□□□□□ -0.57
TRIM3-212ENST00000533064 L7N2F9 121 aa11.48□□□□□ -0.57
TRIM3-212ENST00000533064 RGS13O14921 159 aa11.48□□□□□ -0.57
TRIM3-212ENST00000533064 ARPC5O15511 151 aa11.48□□□□□ -0.57
TRIM3-212ENST00000533064 RBFOX2O43251 390 aaKnown RBP eCLIP11.48□□□□□ -0.57
TRIM3-212ENST00000533064 ATG12O94817 140 aa11.48□□□□□ -0.57
TRIM3-212ENST00000533064 FBP1P09467 338 aa11.48□□□□□ -0.57
TRIM3-212ENST00000533064 CXCL2P19875 107 aa11.48□□□□□ -0.57
TRIM3-212ENST00000533064 BRS3P32247 399 aa11.48□□□□□ -0.57
TRIM3-212ENST00000533064 ZNF546Q86UE3 836 aa11.48□□□□□ -0.57
TRIM3-212ENST00000533064 PDPNQ86YL7 162 aa11.48□□□□□ -0.57
TRIM3-212ENST00000533064 RBPMSQ93062 196 aaKnown RBP11.48□□□□□ -0.57
TRIM3-212ENST00000533064 TMUB1Q9BVT8 246 aa11.48□□□□□ -0.57
TRIM3-212ENST00000533064 GSKIPQ9P0R6 139 aa11.48□□□□□ -0.57
TRIM3-212ENST00000533064 WASHC3Q9Y3C0 194 aa11.48□□□□□ -0.57
TRIM3-212ENST00000533064 TET2Q6N021 2002 aaPredicted RBP11.48□□□□□ -0.57
TRIM3-212ENST00000533064 PLXNB1O43157 2135 aa11.48□□□□□ -0.57
TRIM3-212ENST00000533064 TIMM23O14925 209 aa11.47□□□□□ -0.57
TRIM3-212ENST00000533064 CRYZL1O95825 349 aa11.47□□□□□ -0.57
TRIM3-212ENST00000533064 HPRT1P00492 218 aa11.47□□□□□ -0.57
TRIM3-212ENST00000533064 PET100P0DJ07 73 aa11.47□□□□□ -0.57
TRIM3-212ENST00000533064 SRP14P37108 136 aaKnown RBP11.47□□□□□ -0.57
TRIM3-212ENST00000533064 LPAR6P43657 344 aa11.47□□□□□ -0.57
TRIM3-212ENST00000533064 FAM120AOSQ5T036 256 aa11.47□□□□□ -0.57
TRIM3-212ENST00000533064 OR4C13Q8NGP0 309 aa11.47□□□□□ -0.57
TRIM3-212ENST00000533064 C17orf50Q8WW18 174 aa11.47□□□□□ -0.57
TRIM3-212ENST00000533064 TNFSF18Q9UNG2 199 aa11.47□□□□□ -0.57
TRIM3-212ENST00000533064 IGHV3-72A0A0B4J1Y9 119 aa11.46□□□□□ -0.57
TRIM3-212ENST00000533064 A0A0U1RQK1 487 aa11.46□□□□□ -0.57
TRIM3-212ENST00000533064 RAMP3O60896 148 aa11.46□□□□□ -0.57
TRIM3-212ENST00000533064 FSHBP01225 129 aa11.46□□□□□ -0.57
TRIM3-212ENST00000533064 LYL1P12980 280 aa11.46□□□□□ -0.57
TRIM3-212ENST00000533064 VDAC1P21796 283 aa11.46□□□□□ -0.57
TRIM3-212ENST00000533064 CD1BP29016 333 aa11.46□□□□□ -0.57
TRIM3-212ENST00000533064 RNASE11Q8TAA1 199 aaKnown RBP11.46□□□□□ -0.57
TRIM3-212ENST00000533064 FLYWCH2Q96CP2 140 aaKnown RBP11.46□□□□□ -0.57
TRIM3-212ENST00000533064 AIFM2Q9BRQ8 373 aa11.46□□□□□ -0.57
TRIM3-212ENST00000533064 MFFQ9GZY8 342 aa11.46□□□□□ -0.57
TRIM3-212ENST00000533064 PLEKHA2Q9HB19 425 aa11.46□□□□□ -0.57
TRIM3-212ENST00000533064 MBD2Q9UBB5 411 aa11.46□□□□□ -0.57
TRIM3-212ENST00000533064 F8P00451 2351 aa11.46□□□□□ -0.58
TRIM3-212ENST00000533064 S1PR2O95136 353 aa11.46□□□□□ -0.58
TRIM3-212ENST00000533064 HRASP01112 189 aa11.46□□□□□ -0.58
TRIM3-212ENST00000533064 PAX6P26367 422 aa11.46□□□□□ -0.58
TRIM3-212ENST00000533064 S100A11P31949 105 aa11.46□□□□□ -0.58
TRIM3-212ENST00000533064 AKR1C2P52895 323 aa11.46□□□□□ -0.58
TRIM3-212ENST00000533064 ERVK-16P61578 105 aa11.46□□□□□ -0.58
TRIM3-212ENST00000533064 RAB32Q13637 225 aa11.46□□□□□ -0.58
TRIM3-212ENST00000533064 ZNF345Q14585 488 aa11.46□□□□□ -0.58
TRIM3-212ENST00000533064 ZNF585BQ52M93 769 aa11.46□□□□□ -0.58
TRIM3-212ENST00000533064 PRSS54Q6PEW0 395 aa11.46□□□□□ -0.58
TRIM3-212ENST00000533064 DYNAPQ8N1N2 210 aa11.46□□□□□ -0.58
TRIM3-212ENST00000533064 OSR1Q8TAX0 266 aaPredicted RBP11.46□□□□□ -0.58
TRIM3-212ENST00000533064 AJUBAQ96IF1 538 aa11.46□□□□□ -0.58
TRIM3-212ENST00000533064 SPIN2AQ99865 258 aa11.46□□□□□ -0.58
TRIM3-212ENST00000533064 SPIN2BQ9BPZ2 258 aa11.46□□□□□ -0.58
TRIM3-212ENST00000533064 RNF126Q9BV68 326 aa11.46□□□□□ -0.58
TRIM3-212ENST00000533064 TMEM160Q9NX00 188 aa11.46□□□□□ -0.58
TRIM3-212ENST00000533064 PAIP2BQ9ULR5 123 aaKnown RBP11.46□□□□□ -0.58
TRIM3-212ENST00000533064 A0A0D9SG52 128 aa11.45□□□□□ -0.58
TRIM3-212ENST00000533064 H0YIZ8 118 aa11.45□□□□□ -0.58
TRIM3-212ENST00000533064 SHOXO15266 292 aa11.45□□□□□ -0.58
TRIM3-212ENST00000533064 TSC22D2O75157 780 aa11.45□□□□□ -0.58
TRIM3-212ENST00000533064 OR2F2O95006 317 aa11.45□□□□□ -0.58
TRIM3-212ENST00000533064 LY6G6DO95868 133 aa11.45□□□□□ -0.58
TRIM3-212ENST00000533064 NQO2P16083 231 aa11.45□□□□□ -0.58
TRIM3-212ENST00000533064 BRWD1-AS2P59051 145 aa11.45□□□□□ -0.58
TRIM3-212ENST00000533064 RPS16P62249 146 aaKnown RBP11.45□□□□□ -0.58
TRIM3-212ENST00000533064 SCGB2A2Q13296 93 aa11.45□□□□□ -0.58
TRIM3-212ENST00000533064 OR2F1Q13607 317 aa11.45□□□□□ -0.58
TRIM3-212ENST00000533064 HES1Q14469 280 aa11.45□□□□□ -0.58
TRIM3-212ENST00000533064 HABP2Q14520 560 aaPredicted RBP11.45□□□□□ -0.58
TRIM3-212ENST00000533064 OPCMLQ14982 345 aa11.45□□□□□ -0.58
TRIM3-212ENST00000533064 NMSQ5H8A3 153 aa11.45□□□□□ -0.58
TRIM3-212ENST00000533064 CLEC9AQ6UXN8 241 aa11.45□□□□□ -0.58
TRIM3-212ENST00000533064 ACOT7LQ6ZUV0 252 aa11.45□□□□□ -0.58
TRIM3-212ENST00000533064 C9orf139Q6ZV77 190 aa11.45□□□□□ -0.58
TRIM3-212ENST00000533064 TMUB2Q71RG4 321 aa11.45□□□□□ -0.58
TRIM3-212ENST00000533064 DMBX1Q8NFW5 382 aa11.45□□□□□ -0.58
TRIM3-212ENST00000533064 CFHR4Q92496 578 aa11.45□□□□□ -0.58
TRIM3-212ENST00000533064 RRNAD1Q96FB5 475 aaKnown RBP11.45□□□□□ -0.58
TRIM3-212ENST00000533064 HARBI1Q96MB7 349 aa11.45□□□□□ -0.58
TRIM3-212ENST00000533064 SMR3AQ99954 134 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms