RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 TPPPO94811 219 aa13.71□□□□□ -0.21
SMG1-203ENST00000532700 HLA-DQB1P01920 261 aa13.71□□□□□ -0.21
SMG1-203ENST00000532700 TPPP2P59282 170 aa13.71□□□□□ -0.21
SMG1-203ENST00000532700 RPL30P62888 115 aaKnown RBP13.71□□□□□ -0.21
SMG1-203ENST00000532700 GVQW1Q8N7I0 195 aa13.71□□□□□ -0.21
SMG1-203ENST00000532700 OR5T1Q8NG75 326 aa13.71□□□□□ -0.21
SMG1-203ENST00000532700 C15orf40Q8WUR7 153 aa13.71□□□□□ -0.21
SMG1-203ENST00000532700 GPHA2Q96T91 129 aa13.71□□□□□ -0.21
SMG1-203ENST00000532700 SCPEP1Q9HB40 452 aa13.71□□□□□ -0.21
SMG1-203ENST00000532700 OVOL1O14753 267 aa13.7□□□□□ -0.22
SMG1-203ENST00000532700 TAGLNQ01995 201 aaKnown RBP13.7□□□□□ -0.22
SMG1-203ENST00000532700 CD69Q07108 199 aa13.7□□□□□ -0.22
SMG1-203ENST00000532700 TCTEX1D1Q8N7M0 179 aa13.7□□□□□ -0.22
SMG1-203ENST00000532700 RHOVQ96L33 236 aa13.7□□□□□ -0.22
SMG1-203ENST00000532700 RSL24D1Q9UHA3 163 aaKnown RBP13.7□□□□□ -0.22
SMG1-203ENST00000532700 OR2W1Q9Y3N9 320 aa13.7□□□□□ -0.22
SMG1-203ENST00000532700 MEIS3P1A6NDR6 274 aa13.69□□□□□ -0.22
SMG1-203ENST00000532700 LINC01619G3V211 115 aa13.69□□□□□ -0.22
SMG1-203ENST00000532700 ZNF701M0R085 212 aaPredicted RBP13.69□□□□□ -0.22
SMG1-203ENST00000532700 CRYZL1O95825 349 aa13.69□□□□□ -0.22
SMG1-203ENST00000532700 TRGV3P03979 118 aa13.69□□□□□ -0.22
SMG1-203ENST00000532700 FCER2P06734 321 aa13.69□□□□□ -0.22
SMG1-203ENST00000532700 BRWD1-AS2P59051 145 aa13.69□□□□□ -0.22
SMG1-203ENST00000532700 EIF4EBP1Q13541 118 aaPredicted RBP13.69□□□□□ -0.22
SMG1-203ENST00000532700 OR2B11Q5JQS5 317 aa13.69□□□□□ -0.22
SMG1-203ENST00000532700 VAX1Q5SQQ9 334 aa13.69□□□□□ -0.22
SMG1-203ENST00000532700 C10orf55Q5SWW7 151 aa13.69□□□□□ -0.22
SMG1-203ENST00000532700 SNX29P2Q8IUI4 249 aa13.69□□□□□ -0.22
SMG1-203ENST00000532700 OR5AP2Q8NGF4 316 aa13.69□□□□□ -0.22
SMG1-203ENST00000532700 EXTL2Q9UBQ6 330 aa13.69□□□□□ -0.22
SMG1-203ENST00000532700 ZNF256Q9Y2P7 627 aaPredicted RBP13.69□□□□□ -0.22
SMG1-203ENST00000532700 TNCP24821 2201 aa13.68□□□□□ -0.22
SMG1-203ENST00000532700 SULT1C2O00338 296 aa13.68□□□□□ -0.22
SMG1-203ENST00000532700 SHOXO15266 292 aa13.68□□□□□ -0.22
SMG1-203ENST00000532700 RAMP3O60896 148 aa13.68□□□□□ -0.22
SMG1-203ENST00000532700 SLC22A5O76082 557 aa13.68□□□□□ -0.22
SMG1-203ENST00000532700 TRBV12-3P01733 135 aa13.68□□□□□ -0.22
SMG1-203ENST00000532700 TMEM267Q0VDI3 215 aaPredicted RBP13.68□□□□□ -0.22
SMG1-203ENST00000532700 POC5Q8NA72 575 aa13.68□□□□□ -0.22
SMG1-203ENST00000532700 C6orf62Q9GZU0 229 aaPredicted RBP13.68□□□□□ -0.22
SMG1-203ENST00000532700 CTDSP2O14595 271 aa13.67□□□□□ -0.22
SMG1-203ENST00000532700 SAP30O75446 220 aa13.67□□□□□ -0.22
SMG1-203ENST00000532700 LGALS7P47929 136 aa13.67□□□□□ -0.22
SMG1-203ENST00000532700 TAS2R46P59540 309 aa13.67□□□□□ -0.22
SMG1-203ENST00000532700 CDK10Q15131 360 aa13.67□□□□□ -0.22
SMG1-203ENST00000532700 C19orf35Q6ZS72 473 aa13.67□□□□□ -0.22
SMG1-203ENST00000532700 VKORC1L1Q8N0U8 176 aa13.67□□□□□ -0.22
SMG1-203ENST00000532700 GPX8Q8TED1 209 aa13.67□□□□□ -0.22
SMG1-203ENST00000532700 SNAPC3Q92966 411 aa13.67□□□□□ -0.22
SMG1-203ENST00000532700 ASCL2Q99929 193 aa13.67□□□□□ -0.22
SMG1-203ENST00000532700 SLIRPQ9GZT3 109 aaKnown RBP13.67□□□□□ -0.22
SMG1-203ENST00000532700 RBM38Q9H0Z9 239 aaKnown RBP13.67□□□□□ -0.22
SMG1-203ENST00000532700 RABL2AQ9UBK7 228 aaPredicted RBP13.67□□□□□ -0.22
SMG1-203ENST00000532700 ANAPC10Q9UM13 185 aa13.67□□□□□ -0.22
SMG1-203ENST00000532700 RABL2BQ9UNT1 228 aa13.67□□□□□ -0.22
SMG1-203ENST00000532700 ANKRD34BA5PLL1 514 aa13.66□□□□□ -0.22
SMG1-203ENST00000532700 TUSC2O75896 110 aa13.66□□□□□ -0.22
SMG1-203ENST00000532700 CNIH1O95406 144 aa13.66□□□□□ -0.22
SMG1-203ENST00000532700 PRH1P02810 166 aa13.66□□□□□ -0.22
SMG1-203ENST00000532700 SAA1P0DJI8 122 aaPredicted RBP13.66□□□□□ -0.22
SMG1-203ENST00000532700 SPNP16150 400 aa13.66□□□□□ -0.22
SMG1-203ENST00000532700 NAT1P18440 290 aa13.66□□□□□ -0.22
SMG1-203ENST00000532700 FCGR2CP31995 323 aa13.66□□□□□ -0.22
SMG1-203ENST00000532700 DYRK1AQ13627 763 aa13.66□□□□□ -0.22
SMG1-203ENST00000532700 PRSS8Q16651 343 aa13.66□□□□□ -0.22
SMG1-203ENST00000532700 RTL8BQ17RB0 113 aa13.66□□□□□ -0.22
SMG1-203ENST00000532700 PYHIN1Q6K0P9 492 aa13.66□□□□□ -0.22
SMG1-203ENST00000532700 ACSM6Q6P461 480 aa13.66□□□□□ -0.22
SMG1-203ENST00000532700 LAX1Q8IWV1 398 aa13.66□□□□□ -0.22
SMG1-203ENST00000532700 ZNF645Q8N7E2 425 aa13.66□□□□□ -0.22
SMG1-203ENST00000532700 MCFD2Q8NI22 146 aa13.66□□□□□ -0.22
SMG1-203ENST00000532700 MIXL1Q9H2W2 232 aa13.66□□□□□ -0.22
SMG1-203ENST00000532700 ZNF355PQ9NSJ1 428 aa13.66□□□□□ -0.22
SMG1-203ENST00000532700 NDUFA13Q9P0J0 144 aa13.66□□□□□ -0.22
SMG1-203ENST00000532700 RBMX2Q9Y388 322 aaKnown RBP13.66□□□□□ -0.22
SMG1-203ENST00000532700 MSGN1A6NI15 193 aa13.65□□□□□ -0.22
SMG1-203ENST00000532700 FCGR3BO75015 233 aa13.65□□□□□ -0.22
SMG1-203ENST00000532700 LY86O95711 162 aa13.65□□□□□ -0.22
SMG1-203ENST00000532700 HSPB1P04792 205 aaKnown RBP13.65□□□□□ -0.22
SMG1-203ENST00000532700 RCVRNP35243 200 aa13.65□□□□□ -0.22
SMG1-203ENST00000532700 UBE2KP61086 200 aa13.65□□□□□ -0.22
SMG1-203ENST00000532700 ZNF45Q02386 682 aa13.65□□□□□ -0.22
SMG1-203ENST00000532700 TNXAQ16473 311 aa13.65□□□□□ -0.22
SMG1-203ENST00000532700 OR5H2Q8NGV7 314 aa13.65□□□□□ -0.22
SMG1-203ENST00000532700 GIMAP1Q8WWP7 306 aa13.65□□□□□ -0.22
SMG1-203ENST00000532700 DIRAS2Q96HU8 199 aa13.65□□□□□ -0.22
SMG1-203ENST00000532700 ADTRPQ96IZ2 230 aa13.65□□□□□ -0.22
SMG1-203ENST00000532700 SLA2Q9H6Q3 261 aa13.65□□□□□ -0.22
SMG1-203ENST00000532700 ZNF430Q9H8G1 570 aaPredicted RBP13.65□□□□□ -0.22
SMG1-203ENST00000532700 A0A1B0GW64 132 aa13.64□□□□□ -0.23
SMG1-203ENST00000532700 E7EUB6 86 aa13.64□□□□□ -0.23
SMG1-203ENST00000532700 CBX3Q13185 183 aa13.64□□□□□ -0.23
SMG1-203ENST00000532700 KCTD9Q7L273 389 aa13.64□□□□□ -0.23
SMG1-203ENST00000532700 ADAD2Q8NCV1 583 aaKnown RBP13.64□□□□□ -0.23
SMG1-203ENST00000532700 FCAMRQ8WWV6 532 aa13.64□□□□□ -0.23
SMG1-203ENST00000532700 SRSF12Q8WXF0 261 aaKnown RBP13.64□□□□□ -0.23
SMG1-203ENST00000532700 TINAGL1Q9GZM7 467 aaPredicted RBP13.64□□□□□ -0.23
SMG1-203ENST00000532700 NXF2Q9GZY0 626 aaKnown RBP13.64□□□□□ -0.23
SMG1-203ENST00000532700 EHFQ9NZC4 300 aa13.64□□□□□ -0.23
SMG1-203ENST00000532700 PPYP01298 95 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms