RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 A3GALT2U3KPV4 340 aa10.88□□□□□ -0.67
TSPAN4-220ENST00000532375 RBFOX2O43251 390 aaKnown RBP eCLIP10.87□□□□□ -0.672e-6■■■■□ 21.7
TSPAN4-220ENST00000532375 PGLYRP1O75594 196 aaPredicted RBP10.87□□□□□ -0.67
TSPAN4-220ENST00000532375 IL6RP08887 468 aaPredicted RBP10.87□□□□□ -0.67
TSPAN4-220ENST00000532375 SAA1P0DJI8 122 aaPredicted RBP10.87□□□□□ -0.67
TSPAN4-220ENST00000532375 CDX1P47902 265 aaPredicted RBP10.87□□□□□ -0.67
TSPAN4-220ENST00000532375 UCP3P55916 312 aa10.87□□□□□ -0.67
TSPAN4-220ENST00000532375 HERV-K104P61576 105 aa10.87□□□□□ -0.67
TSPAN4-220ENST00000532375 MRPS10P82664 201 aaKnown RBP10.87□□□□□ -0.67
TSPAN4-220ENST00000532375 FXYD3Q14802 87 aa10.87□□□□□ -0.67
TSPAN4-220ENST00000532375 PRSS8Q16651 343 aa10.87□□□□□ -0.67
TSPAN4-220ENST00000532375 AKIRIN2Q53H80 203 aa10.87□□□□□ -0.67
TSPAN4-220ENST00000532375 FOXB2Q5VYV0 432 aa10.87□□□□□ -0.67
TSPAN4-220ENST00000532375 IDO2Q6ZQW0 420 aa10.87□□□□□ -0.67
TSPAN4-220ENST00000532375 PUSL1Q8N0Z8 303 aaKnown RBP10.87□□□□□ -0.67
TSPAN4-220ENST00000532375 TMEM229BQ8NBD8 167 aa10.87□□□□□ -0.67
TSPAN4-220ENST00000532375 OR4D10Q8NGI6 311 aa10.87□□□□□ -0.67
TSPAN4-220ENST00000532375 NOTCH1P46531 2555 aa10.86□□□□□ -0.67
TSPAN4-220ENST00000532375 CCDC160A6NGH7 325 aa10.86□□□□□ -0.67
TSPAN4-220ENST00000532375 GSTZ1O43708 216 aaPredicted RBP10.86□□□□□ -0.67
TSPAN4-220ENST00000532375 SSBP1Q04837 148 aaKnown RBP10.86□□□□□ -0.67
TSPAN4-220ENST00000532375 POU2AF1Q16633 256 aa10.86□□□□□ -0.67
TSPAN4-220ENST00000532375 ACTBL2Q562R1 376 aa10.86□□□□□ -0.67
TSPAN4-220ENST00000532375 VKORC1L1Q8N0U8 176 aa10.86□□□□□ -0.67
TSPAN4-220ENST00000532375 SPAG16Q8N0X2 631 aa10.86□□□□□ -0.67
TSPAN4-220ENST00000532375 LFNGQ8NES3 379 aa10.86□□□□□ -0.67
TSPAN4-220ENST00000532375 OR4F17Q8NGA8 305 aa10.86□□□□□ -0.67
TSPAN4-220ENST00000532375 OR4S2Q8NH73 311 aa10.86□□□□□ -0.67
TSPAN4-220ENST00000532375 ARPC1AQ92747 370 aa10.86□□□□□ -0.67
TSPAN4-220ENST00000532375 MRGPRFQ96AM1 343 aa10.86□□□□□ -0.67
TSPAN4-220ENST00000532375 OR4F4Q96R69 305 aa10.86□□□□□ -0.67
TSPAN4-220ENST00000532375 RSRP1Q9BUV0 290 aa10.86□□□□□ -0.67
TSPAN4-220ENST00000532375 ZNF430Q9H8G1 570 aaPredicted RBP10.86□□□□□ -0.67
TSPAN4-220ENST00000532375 RABL2AQ9UBK7 228 aaPredicted RBP10.86□□□□□ -0.67
TSPAN4-220ENST00000532375 RABL2BQ9UNT1 228 aa10.86□□□□□ -0.67
TSPAN4-220ENST00000532375 DPPA5A6NC42 116 aa10.85□□□□□ -0.67
TSPAN4-220ENST00000532375 GPR31O00270 319 aa10.85□□□□□ -0.67
TSPAN4-220ENST00000532375 TBPP20226 339 aa10.85□□□□□ -0.67
TSPAN4-220ENST00000532375 KIR2DS2P43631 304 aa10.85□□□□□ -0.67
TSPAN4-220ENST00000532375 RAB9AP51151 201 aa10.85□□□□□ -0.67
TSPAN4-220ENST00000532375 TSPAN5P62079 268 aa10.85□□□□□ -0.67
TSPAN4-220ENST00000532375 CBX3Q13185 183 aa10.85□□□□□ -0.67
TSPAN4-220ENST00000532375 IL18Q14116 193 aa10.85□□□□□ -0.67
TSPAN4-220ENST00000532375 ECSCRQ19T08 205 aa10.85□□□□□ -0.67
TSPAN4-220ENST00000532375 VMA21Q3ZAQ7 101 aa10.85□□□□□ -0.67
TSPAN4-220ENST00000532375 ZNF585BQ52M93 769 aa10.85□□□□□ -0.67
TSPAN4-220ENST00000532375 CXorf66Q5JRM2 361 aaPredicted RBP10.85□□□□□ -0.67
TSPAN4-220ENST00000532375 C8orf86Q6ZUL3 223 aa10.85□□□□□ -0.67
TSPAN4-220ENST00000532375 ARRDC1Q8N5I2 433 aa10.85□□□□□ -0.67
TSPAN4-220ENST00000532375 ZNF491Q8N8L2 437 aa10.85□□□□□ -0.67
TSPAN4-220ENST00000532375 RHOVQ96L33 236 aa10.85□□□□□ -0.67
TSPAN4-220ENST00000532375 P2RX4Q99571 388 aa10.85□□□□□ -0.67
TSPAN4-220ENST00000532375 V9GYH0 126 aa10.85□□□□□ -0.67
TSPAN4-220ENST00000532375 A0A1B0GW64 132 aa10.84□□□□□ -0.67
TSPAN4-220ENST00000532375 FABP12A6NFH5 140 aa10.84□□□□□ -0.67
TSPAN4-220ENST00000532375 E7EUB6 86 aa10.84□□□□□ -0.67
TSPAN4-220ENST00000532375 TAS2R19P59542 299 aa10.84□□□□□ -0.67
TSPAN4-220ENST00000532375 TMEM267Q0VDI3 215 aaPredicted RBP10.84□□□□□ -0.67
TSPAN4-220ENST00000532375 RNASE10Q5GAN6 216 aaKnown RBP10.84□□□□□ -0.67
TSPAN4-220ENST00000532375 STEAP1BQ6NZ63 245 aa10.84□□□□□ -0.67
TSPAN4-220ENST00000532375 UNQ5815/PRO19632Q6UWF5 114 aa10.84□□□□□ -0.67
TSPAN4-220ENST00000532375 CCDC190Q86UF4 302 aa10.84□□□□□ -0.67
TSPAN4-220ENST00000532375 ZNF695Q8IW36 515 aa10.84□□□□□ -0.67
TSPAN4-220ENST00000532375 TCTEX1D1Q8N7M0 179 aa10.84□□□□□ -0.67
TSPAN4-220ENST00000532375 OR51H1Q8NH63 302 aa10.84□□□□□ -0.67
TSPAN4-220ENST00000532375 TMEM167AQ8TBQ9 72 aa10.84□□□□□ -0.67
TSPAN4-220ENST00000532375 CASTOR1Q8WTX7 329 aa10.84□□□□□ -0.67
TSPAN4-220ENST00000532375 BORCS5Q969J3 196 aa10.84□□□□□ -0.67
TSPAN4-220ENST00000532375 DGCR14Q96DF8 476 aaKnown RBP10.84□□□□□ -0.67
TSPAN4-220ENST00000532375 FOXA2Q9Y261 457 aaPredicted RBP10.84□□□□□ -0.67
TSPAN4-220ENST00000532375 A0A1W2PN81 502 aa10.83□□□□□ -0.68
TSPAN4-220ENST00000532375 RAB3DO95716 219 aa10.83□□□□□ -0.68
TSPAN4-220ENST00000532375 HPRT1P00492 218 aa10.83□□□□□ -0.68
TSPAN4-220ENST00000532375 RLN1P04808 185 aa10.83□□□□□ -0.68
TSPAN4-220ENST00000532375 F2RP25116 425 aa10.83□□□□□ -0.68
TSPAN4-220ENST00000532375 SLC6A1P30531 599 aa10.83□□□□□ -0.68
TSPAN4-220ENST00000532375 CHRNA7P36544 502 aa10.83□□□□□ -0.68
TSPAN4-220ENST00000532375 CATR1Q13166 79 aa10.83□□□□□ -0.68
TSPAN4-220ENST00000532375 ZNF79Q15937 498 aa10.83□□□□□ -0.68
TSPAN4-220ENST00000532375 KHDC1LQ5JSQ8 128 aa10.83□□□□□ -0.68
TSPAN4-220ENST00000532375 C10orf55Q5SWW7 151 aa10.83□□□□□ -0.68
TSPAN4-220ENST00000532375 SAMD5Q5TGI4 173 aa10.83□□□□□ -0.68
TSPAN4-220ENST00000532375 MRPL41Q8IXM3 137 aaKnown RBP10.83□□□□□ -0.68
TSPAN4-220ENST00000532375 MMD2Q8IY49 270 aa10.83□□□□□ -0.68
TSPAN4-220ENST00000532375 LINC00482Q8N8I6 264 aa10.83□□□□□ -0.68
TSPAN4-220ENST00000532375 KLHL30-AS1Q8NEE0 82 aa10.83□□□□□ -0.68
TSPAN4-220ENST00000532375 TERB2Q8NHR7 220 aa10.83□□□□□ -0.68
TSPAN4-220ENST00000532375 GRPEL2Q8TAA5 225 aa10.83□□□□□ -0.68
TSPAN4-220ENST00000532375 RAX2Q96IS3 184 aa10.83□□□□□ -0.68
TSPAN4-220ENST00000532375 UBE2E2Q96LR5 201 aa10.83□□□□□ -0.68
TSPAN4-220ENST00000532375 GNB4Q9HAV0 340 aa10.83□□□□□ -0.68
TSPAN4-220ENST00000532375 PLEKHA2Q9HB19 425 aa10.83□□□□□ -0.68
TSPAN4-220ENST00000532375 TRAV3A0A0B4J244 114 aa10.82□□□□□ -0.68
TSPAN4-220ENST00000532375 ANKRD20A5PA0PJZ0 165 aa10.82□□□□□ -0.68
TSPAN4-220ENST00000532375 MSGN1A6NI15 193 aa10.82□□□□□ -0.68
TSPAN4-220ENST00000532375 CGB1A6NKQ9 187 aa10.82□□□□□ -0.68
TSPAN4-220ENST00000532375 I3L521 148 aa10.82□□□□□ -0.68
TSPAN4-220ENST00000532375 KBTBD11O94819 623 aa10.82□□□□□ -0.68
TSPAN4-220ENST00000532375 OR2A4O95047 310 aa10.82□□□□□ -0.68
TSPAN4-220ENST00000532375 S1PR2O95136 353 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 399.6 ms