RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 CRYGBP07316 175 aa11.45□□□□□ -0.58
CPSF1-206ENST00000531480 ANXA3P12429 323 aa11.45□□□□□ -0.58
CPSF1-206ENST00000531480 PGAM2P15259 253 aa11.45□□□□□ -0.58
CPSF1-206ENST00000531480 CCR6P51684 374 aa11.45□□□□□ -0.58
CPSF1-206ENST00000531480 C5orf64Q2M2E5 130 aa11.45□□□□□ -0.58
CPSF1-206ENST00000531480 SLC38A6Q8IZM9 456 aa11.45□□□□□ -0.58
CPSF1-206ENST00000531480 CCDC71LQ8N9Z2 235 aa11.45□□□□□ -0.58
CPSF1-206ENST00000531480 OSR1Q8TAX0 266 aaPredicted RBP11.45□□□□□ -0.58
CPSF1-206ENST00000531480 TSNAXQ99598 290 aaKnown RBP11.45□□□□□ -0.58
CPSF1-206ENST00000531480 ZNF747Q9BV97 191 aa11.45□□□□□ -0.58
CPSF1-206ENST00000531480 FAM212BQ9NTI7 297 aaPredicted RBP11.45□□□□□ -0.58
CPSF1-206ENST00000531480 KCNIP3Q9Y2W7 256 aa11.45□□□□□ -0.58
CPSF1-206ENST00000531480 SIGLEC9Q9Y336 463 aa11.45□□□□□ -0.58
CPSF1-206ENST00000531480 PRELID3BQ9Y3B1 194 aa11.45□□□□□ -0.58
CPSF1-206ENST00000531480 PLXNB1O43157 2135 aa11.45□□□□□ -0.58
CPSF1-206ENST00000531480 SRRM4A7MD48 611 aaKnown RBP11.44□□□□□ -0.58
CPSF1-206ENST00000531480 SNRPGP15A8MWD9 76 aa11.44□□□□□ -0.58
CPSF1-206ENST00000531480 PFDN1O60925 122 aa11.44□□□□□ -0.58
CPSF1-206ENST00000531480 PGLYRP1O75594 196 aaPredicted RBP11.44□□□□□ -0.58
CPSF1-206ENST00000531480 B3GALNT1O75752 331 aa11.44□□□□□ -0.58
CPSF1-206ENST00000531480 KIR2DS2P43631 304 aa11.44□□□□□ -0.58
CPSF1-206ENST00000531480 RND3P61587 244 aa11.44□□□□□ -0.58
CPSF1-206ENST00000531480 PSG5Q15238 335 aa11.44□□□□□ -0.58
CPSF1-206ENST00000531480 FAAP20Q6NZ36 180 aa11.44□□□□□ -0.58
CPSF1-206ENST00000531480 PPP1R14BQ96C90 147 aa11.44□□□□□ -0.58
CPSF1-206ENST00000531480 GPHA2Q96T91 129 aa11.44□□□□□ -0.58
CPSF1-206ENST00000531480 TNCP24821 2201 aa11.43□□□□□ -0.58
CPSF1-206ENST00000531480 TRAV6A0A075B6T7 132 aa11.43□□□□□ -0.58
CPSF1-206ENST00000531480 SH2D7A6NKC9 451 aaPredicted RBP11.43□□□□□ -0.58
CPSF1-206ENST00000531480 CREBL2O60519 120 aaPredicted RBP11.43□□□□□ -0.58
CPSF1-206ENST00000531480 FCGR3BO75015 233 aa11.43□□□□□ -0.58
CPSF1-206ENST00000531480 MECP2P51608 486 aaKnown RBP11.43□□□□□ -0.58
CPSF1-206ENST00000531480 RPS16P62249 146 aaKnown RBP11.43□□□□□ -0.58
CPSF1-206ENST00000531480 CATR1Q13166 79 aa11.43□□□□□ -0.58
CPSF1-206ENST00000531480 CBX3Q13185 183 aa11.43□□□□□ -0.58
CPSF1-206ENST00000531480 MRGPRG-AS1Q2M3A8 158 aa11.43□□□□□ -0.58
CPSF1-206ENST00000531480 C12orf54Q6X4T0 127 aa11.43□□□□□ -0.58
CPSF1-206ENST00000531480 TCTEX1D1Q8N7M0 179 aa11.43□□□□□ -0.58
CPSF1-206ENST00000531480 OR13C8Q8NGS7 320 aa11.43□□□□□ -0.58
CPSF1-206ENST00000531480 OR4S2Q8NH73 311 aa11.43□□□□□ -0.58
CPSF1-206ENST00000531480 TCTEX1D2Q8WW35 142 aa11.43□□□□□ -0.58
CPSF1-206ENST00000531480 CITED1Q99966 193 aa11.43□□□□□ -0.58
CPSF1-206ENST00000531480 RASL11BQ9BPW5 248 aa11.43□□□□□ -0.58
CPSF1-206ENST00000531480 KIAA1456Q9P272 454 aa11.43□□□□□ -0.58
CPSF1-206ENST00000531480 IGHV7-81A0A0B4J1V7 117 aa11.42□□□□□ -0.58
CPSF1-206ENST00000531480 ARPC1BO15143 372 aaKnown RBP11.42□□□□□ -0.58
CPSF1-206ENST00000531480 KCNAB3O43448 404 aa11.42□□□□□ -0.58
CPSF1-206ENST00000531480 TNFSF12O43508 249 aa11.42□□□□□ -0.58
CPSF1-206ENST00000531480 CRYZL1O95825 349 aa11.42□□□□□ -0.58
CPSF1-206ENST00000531480 IGF1P05019 195 aa11.42□□□□□ -0.58
CPSF1-206ENST00000531480 TRAPPC2P0DI81 140 aa11.42□□□□□ -0.58
CPSF1-206ENST00000531480 TRAPPC2BP0DI82 140 aa11.42□□□□□ -0.58
CPSF1-206ENST00000531480 VSIG10L2P0DP72 767 aa11.42□□□□□ -0.58
CPSF1-206ENST00000531480 VDAC2P45880 294 aaPredicted RBP11.42□□□□□ -0.58
CPSF1-206ENST00000531480 CRIP2P52943 208 aaPredicted RBP11.42□□□□□ -0.58
CPSF1-206ENST00000531480 KRTAP10-3P60369 221 aa11.42□□□□□ -0.58
CPSF1-206ENST00000531480 UBE2KP61086 200 aa11.42□□□□□ -0.58
CPSF1-206ENST00000531480 POU2AF1Q16633 256 aa11.42□□□□□ -0.58
CPSF1-206ENST00000531480 TATDN3Q17R31 274 aa11.42□□□□□ -0.58
CPSF1-206ENST00000531480 TMEM95Q3KNT9 176 aa11.42□□□□□ -0.58
CPSF1-206ENST00000531480 C4orf46Q504U0 113 aa11.42□□□□□ -0.58
CPSF1-206ENST00000531480 TMEM128Q5BJH2 165 aa11.42□□□□□ -0.58
CPSF1-206ENST00000531480 LIN54Q6MZP7 749 aa11.42□□□□□ -0.58
CPSF1-206ENST00000531480 CADM3Q8N126 398 aa11.42□□□□□ -0.58
CPSF1-206ENST00000531480 TEX45Q8NA69 505 aa11.42□□□□□ -0.58
CPSF1-206ENST00000531480 CD300LFQ8TDQ1 290 aa11.42□□□□□ -0.58
CPSF1-206ENST00000531480 HARBI1Q96MB7 349 aa11.42□□□□□ -0.58
CPSF1-206ENST00000531480 HSPB9Q9BQS6 159 aa11.42□□□□□ -0.58
CPSF1-206ENST00000531480 FBXL15Q9H469 300 aa11.42□□□□□ -0.58
CPSF1-206ENST00000531480 SLC2A9Q9NRM0 540 aa11.42□□□□□ -0.58
CPSF1-206ENST00000531480 LINC01548A6NM66 108 aa11.41□□□□□ -0.58
CPSF1-206ENST00000531480 SHOXO15266 292 aa11.41□□□□□ -0.58
CPSF1-206ENST00000531480 RAMP3O60896 148 aa11.41□□□□□ -0.58
CPSF1-206ENST00000531480 CTSDP07339 412 aaPredicted RBP11.41□□□□□ -0.58
CPSF1-206ENST00000531480 IL6RP08887 468 aaPredicted RBP11.41□□□□□ -0.58
CPSF1-206ENST00000531480 F2RP25116 425 aa11.41□□□□□ -0.58
CPSF1-206ENST00000531480 BTCP35070 178 aa11.41□□□□□ -0.58
CPSF1-206ENST00000531480 SSBP2P81877 361 aaPredicted RBP11.41□□□□□ -0.58
CPSF1-206ENST00000531480 SLC35E3Q7Z769 313 aa11.41□□□□□ -0.58
CPSF1-206ENST00000531480 SGPP2Q8IWX5 399 aa11.41□□□□□ -0.58
CPSF1-206ENST00000531480 SPAG16Q8N0X2 631 aa11.41□□□□□ -0.58
CPSF1-206ENST00000531480 KLHDC1Q8N7A1 406 aa11.41□□□□□ -0.58
CPSF1-206ENST00000531480 ASB13Q8WXK3 278 aa11.41□□□□□ -0.58
CPSF1-206ENST00000531480 MED28Q9H204 178 aa11.41□□□□□ -0.58
CPSF1-206ENST00000531480 PLEKHA2Q9HB19 425 aa11.41□□□□□ -0.58
CPSF1-206ENST00000531480 METTL1Q9UBP6 276 aaKnown RBP11.41□□□□□ -0.58
CPSF1-206ENST00000531480 GPR132Q9UNW8 380 aa11.41□□□□□ -0.58
CPSF1-206ENST00000531480 AP4M1O00189 453 aa11.4□□□□□ -0.58
CPSF1-206ENST00000531480 FCN1O00602 326 aa11.4□□□□□ -0.58
CPSF1-206ENST00000531480 SSNA1O43805 119 aa11.4□□□□□ -0.58
CPSF1-206ENST00000531480 SLC25A17O43808 307 aa11.4□□□□□ -0.58
CPSF1-206ENST00000531480 HPRT1P00492 218 aa11.4□□□□□ -0.58
CPSF1-206ENST00000531480 SRPXP78539 464 aa11.4□□□□□ -0.58
CPSF1-206ENST00000531480 CFHR3Q02985 330 aa11.4□□□□□ -0.58
CPSF1-206ENST00000531480 ZNF585BQ52M93 769 aa11.4□□□□□ -0.58
CPSF1-206ENST00000531480 ZNF562Q6V9R5 426 aa11.4□□□□□ -0.58
CPSF1-206ENST00000531480 TMED4Q7Z7H5 227 aa11.4□□□□□ -0.58
CPSF1-206ENST00000531480 SLC25A42Q86VD7 318 aa11.4□□□□□ -0.58
CPSF1-206ENST00000531480 PPP1R27Q86WC6 154 aa11.4□□□□□ -0.58
CPSF1-206ENST00000531480 PUSL1Q8N0Z8 303 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms