RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 TRIB3Q96RU7 358 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 PRADC1Q9BSG0 188 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 MARCH5Q9NX47 278 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 TAS2R8Q9NYW2 309 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 COMMD3Q9UBI1 195 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 PKIGQ9Y2B9 76 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 PLCH2O75038 1416 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 WNK3Q9BYP7 1800 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 CHD5Q8TDI0 1954 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 SYNJ1O43426 1573 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 PZPP20742 1482 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 MYOM2P54296 1465 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 ROBO3Q96MS0 1386 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 TMED7-TICAM2A0A0A6YYA0 188 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 TRAV8-2A0A0B4J237 113 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 A0A0G2JMM0 328 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 FAM236DA0A1B0GTK5 79 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 A0A1W2PPB8 328 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 KIR3DP1A8MWS1 328 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 RPL36A-HNRNPH2H7BZ11 118 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 SULT2B1O00204 365 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 MYL12BO14950 172 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 ARL6IP5O75915 188 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 OR2A4O95047 310 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 AIFM1O95831 613 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 GYPCP04921 128 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 CSN2P05814 226 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 GPX1P07203 203 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 MMP7P09237 267 aaPredicted RBP2.42□□□□□ -2.02
PTPRK-220ENST00000531466 FAM236CP0DP71 79 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 RPL7P18124 248 aaKnown RBP2.42□□□□□ -2.02
PTPRK-220ENST00000531466 RPS4Y1P22090 263 aaKnown RBP2.42□□□□□ -2.02
PTPRK-220ENST00000531466 PPP1CCP36873 323 aaKnown RBP2.42□□□□□ -2.02
PTPRK-220ENST00000531466 TGFBR1P36897 503 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 PTGDSP41222 190 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 RPL29P47914 159 aaKnown RBP2.42□□□□□ -2.02
PTPRK-220ENST00000531466 ZNF140P52738 457 aaPredicted RBP2.42□□□□□ -2.02
PTPRK-220ENST00000531466 TMBIM6P55061 237 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 NDUFA6P56556 154 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 TPPP2P59282 170 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 UBE2NP61088 152 aaKnown RBP2.42□□□□□ -2.02
PTPRK-220ENST00000531466 SNRPD2P62316 118 aaKnown RBP2.42□□□□□ -2.02
PTPRK-220ENST00000531466 GRB2P62993 217 aaKnown RBP2.42□□□□□ -2.02
PTPRK-220ENST00000531466 MEF2BQ02080 365 aaPredicted RBP2.42□□□□□ -2.02
PTPRK-220ENST00000531466 PRDX1Q06830 199 aaKnown RBP2.42□□□□□ -2.02
PTPRK-220ENST00000531466 PRDX4Q13162 271 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 ARFRP1Q13795 201 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 C1DQ13901 141 aaKnown RBP2.42□□□□□ -2.02
PTPRK-220ENST00000531466 CCSMST1Q4G0I0 132 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 MESTQ5EB52 335 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 TMEM255AQ5JRV8 349 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 VAX1Q5SQQ9 334 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 GLYATL3Q5SZD4 288 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 RASL11AQ6T310 242 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 GLIPR1L1Q6UWM5 242 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 IZUMO2Q6UXV1 221 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 PRSS48Q7RTY5 328 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 TMEM86AQ8N2M4 240 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 DEFB125Q8N687 156 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 SUMF2Q8NBJ7 301 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 NUP35Q8NFH5 326 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 OR2M3Q8NG83 312 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 OR4S1Q8NGB4 309 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 OR8B12Q8NGG6 310 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 OR51A4Q8NGJ6 313 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 OR51G1Q8NGK1 321 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 OR5AR1Q8NGP9 310 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 OR51E1Q8TCB6 317 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 RAB2BQ8WUD1 216 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 SRSF12Q8WXF0 261 aaKnown RBP2.42□□□□□ -2.02
PTPRK-220ENST00000531466 TMEM230Q96A57 120 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 DNAJA3Q96EY1 480 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 FMC1Q96HJ9 113 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 TMEM101Q96IK0 257 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 AP1S3Q96PC3 154 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 OR2A7Q96R45 310 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 GTSF1LQ9H1H1 148 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 TUBA4BQ9H853 241 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 TMEM9BQ9NQ34 198 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 EXOSC3Q9NQT5 275 aaKnown RBP2.42□□□□□ -2.02
PTPRK-220ENST00000531466 SMCO4Q9NRQ5 59 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 ZNF586Q9NXT0 402 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 EHFQ9NZC4 300 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 CYSLTR1Q9Y271 337 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 KLF13Q9Y2Y9 288 aaPredicted RBP2.42□□□□□ -2.02
PTPRK-220ENST00000531466 NOP16Q9Y3C1 178 aaKnown RBP2.42□□□□□ -2.02
PTPRK-220ENST00000531466 MED31Q9Y3C7 131 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 RFNGQ9Y644 331 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 PSME4Q14997 1843 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 KIAA1551Q9HCM1 1747 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 MAPKBP1O60336 1514 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 CASKIN1Q8WXD9 1431 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 PRG4Q92954 1404 aaPredicted RBP2.42□□□□□ -2.02
PTPRK-220ENST00000531466 NFASCO94856 1347 aa2.42□□□□□ -2.02
PTPRK-220ENST00000531466 A0A087WXM4 84 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 TRAV26-2A0A0B4J265 109 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 LOC102725191A0A1B0GVB3 256 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 A0A1B0GWB2 263 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 MYBPHLA2RUH7 354 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 BTNL10A8MVZ5 291 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms