RNA–Protein interactions for RNA: ENST00000530790.5

VPS28-211, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-211ENST00000530790 CBX5P45973 191 aa10.26□□□□□ -0.77
VPS28-211ENST00000530790 UBE2NLQ5JXB2 153 aa10.26□□□□□ -0.77
VPS28-211ENST00000530790 VAX1Q5SQQ9 334 aa10.26□□□□□ -0.77
VPS28-211ENST00000530790 C11orf87Q6NUJ2 197 aa10.26□□□□□ -0.77
VPS28-211ENST00000530790 HOGA1Q86XE5 327 aa10.26□□□□□ -0.77
VPS28-211ENST00000530790 OR13F1Q8NGS4 319 aa10.26□□□□□ -0.77
VPS28-211ENST00000530790 YIPF6Q96EC8 236 aa10.26□□□□□ -0.77
VPS28-211ENST00000530790 TINAGL1Q9GZM7 467 aaPredicted RBP10.26□□□□□ -0.77
VPS28-211ENST00000530790 RANGRFQ9HD47 186 aaPredicted RBP10.26□□□□□ -0.77
VPS28-211ENST00000530790 IFT46Q9NQC8 304 aa10.26□□□□□ -0.77
VPS28-211ENST00000530790 TAS2R8Q9NYW2 309 aa10.26□□□□□ -0.77
VPS28-211ENST00000530790 MSGN1A6NI15 193 aa10.25□□□□□ -0.77
VPS28-211ENST00000530790 BRI3O95415 125 aa10.25□□□□□ -0.77
VPS28-211ENST00000530790 ZP3P21754 424 aa10.25□□□□□ -0.77
VPS28-211ENST00000530790 FCGR2CP31995 323 aa10.25□□□□□ -0.77
VPS28-211ENST00000530790 LSM3P62310 102 aaKnown RBP10.25□□□□□ -0.77
VPS28-211ENST00000530790 RPL30P62888 115 aaKnown RBP10.25□□□□□ -0.77
VPS28-211ENST00000530790 MRGPRG-AS1Q2M3A8 158 aa10.25□□□□□ -0.77
VPS28-211ENST00000530790 ACSM6Q6P461 480 aa10.25□□□□□ -0.77
VPS28-211ENST00000530790 ZNF66Q6ZN08 573 aa10.25□□□□□ -0.77
VPS28-211ENST00000530790 MMD2Q8IY49 270 aa10.25□□□□□ -0.77
VPS28-211ENST00000530790 OR6Q1Q8NGQ2 317 aa10.25□□□□□ -0.77
VPS28-211ENST00000530790 VSTM2AQ8TAG5 236 aa10.25□□□□□ -0.77
VPS28-211ENST00000530790 SECTM1Q8WVN6 248 aa10.25□□□□□ -0.77
VPS28-211ENST00000530790 S100A16Q96FQ6 103 aaKnown RBP10.25□□□□□ -0.77
VPS28-211ENST00000530790 OR4C12Q96R67 309 aa10.25□□□□□ -0.77
VPS28-211ENST00000530790 SPIN2AQ99865 258 aa10.25□□□□□ -0.77
VPS28-211ENST00000530790 SPIN2BQ9BPZ2 258 aa10.25□□□□□ -0.77
VPS28-211ENST00000530790 ZNF430Q9H8G1 570 aaPredicted RBP10.25□□□□□ -0.77
VPS28-211ENST00000530790 LSM4Q9Y4Z0 139 aaKnown RBP10.25□□□□□ -0.77
VPS28-211ENST00000530790 MEIS3P1A6NDR6 274 aa10.24□□□□□ -0.77
VPS28-211ENST00000530790 XRCC3O43542 346 aa10.24□□□□□ -0.77
VPS28-211ENST00000530790 PPYP01298 95 aa10.24□□□□□ -0.77
VPS28-211ENST00000530790 FCER2P06734 321 aa10.24□□□□□ -0.77
VPS28-211ENST00000530790 OR9G9P0C7N8 305 aa10.24□□□□□ -0.77
VPS28-211ENST00000530790 PTHLHP12272 177 aa10.24□□□□□ -0.77
VPS28-211ENST00000530790 KIR2DS2P43631 304 aa10.24□□□□□ -0.77
VPS28-211ENST00000530790 DEFA5Q01523 94 aa10.24□□□□□ -0.77
VPS28-211ENST00000530790 EIF4EBP1Q13541 118 aaPredicted RBP10.24□□□□□ -0.77
VPS28-211ENST00000530790 MSMO1Q15800 293 aa10.24□□□□□ -0.77
VPS28-211ENST00000530790 TMEM69Q5SWH9 247 aa10.24□□□□□ -0.77
VPS28-211ENST00000530790 MFSD4AQ8N468 514 aa10.24□□□□□ -0.77
VPS28-211ENST00000530790 SAMD12Q8N8I0 201 aa10.24□□□□□ -0.77
VPS28-211ENST00000530790 ADAD2Q8NCV1 583 aaKnown RBP10.24□□□□□ -0.77
VPS28-211ENST00000530790 SNAPC3Q92966 411 aa10.24□□□□□ -0.77
VPS28-211ENST00000530790 USMG5Q96IX5 58 aa10.24□□□□□ -0.77
VPS28-211ENST00000530790 ELOVL1Q9BW60 279 aa10.24□□□□□ -0.77
VPS28-211ENST00000530790 COL7A1Q02388 2944 aa10.24□□□□□ -0.77
VPS28-211ENST00000530790 ANKRD34BA5PLL1 514 aa10.23□□□□□ -0.77
VPS28-211ENST00000530790 TNFSF12O43508 249 aa10.23□□□□□ -0.77
VPS28-211ENST00000530790 KBTBD11O94819 623 aa10.23□□□□□ -0.77
VPS28-211ENST00000530790 OR2A4O95047 310 aa10.23□□□□□ -0.77
VPS28-211ENST00000530790 RPS19P39019 145 aaKnown RBP10.23□□□□□ -0.77
VPS28-211ENST00000530790 FXYD4P59646 89 aa10.23□□□□□ -0.77
VPS28-211ENST00000530790 DYRK1AQ13627 763 aa10.23□□□□□ -0.77
VPS28-211ENST00000530790 C10orf55Q5SWW7 151 aa10.23□□□□□ -0.77
VPS28-211ENST00000530790 VKORC1L1Q8N0U8 176 aa10.23□□□□□ -0.77
VPS28-211ENST00000530790 OR5AP2Q8NGF4 316 aa10.23□□□□□ -0.77
VPS28-211ENST00000530790 OR2A7Q96R45 310 aa10.23□□□□□ -0.77
VPS28-211ENST00000530790 RSRP1Q9BUV0 290 aa10.23□□□□□ -0.77
VPS28-211ENST00000530790 SLC5A7Q9GZV3 580 aa10.23□□□□□ -0.77
VPS28-211ENST00000530790 CCL28Q9NRJ3 127 aa10.23□□□□□ -0.77
VPS28-211ENST00000530790 FAM223BA6NKX1 122 aa10.22□□□□□ -0.77
VPS28-211ENST00000530790 HRASP01112 189 aa10.22□□□□□ -0.77
VPS28-211ENST00000530790 SPNP16150 400 aa10.22□□□□□ -0.77
VPS28-211ENST00000530790 TAS2R20P59543 309 aa10.22□□□□□ -0.77
VPS28-211ENST00000530790 HERV-K104P61576 105 aa10.22□□□□□ -0.77
VPS28-211ENST00000530790 RHOGP84095 191 aa10.22□□□□□ -0.77
VPS28-211ENST00000530790 CATR1Q13166 79 aa10.22□□□□□ -0.77
VPS28-211ENST00000530790 ZNF343Q6P1L6 599 aa10.22□□□□□ -0.77
VPS28-211ENST00000530790 TMEM17Q86X19 198 aa10.22□□□□□ -0.77
VPS28-211ENST00000530790 FAM223AQ8IWN6 122 aa10.22□□□□□ -0.77
VPS28-211ENST00000530790 ZBTB34Q8NCN2 500 aa10.22□□□□□ -0.77
VPS28-211ENST00000530790 SLC25A46Q96AG3 418 aa10.22□□□□□ -0.77
VPS28-211ENST00000530790 KCTD12Q96CX2 325 aaKnown RBP10.22□□□□□ -0.77
VPS28-211ENST00000530790 GPHA2Q96T91 129 aa10.22□□□□□ -0.77
VPS28-211ENST00000530790 EHFQ9NZC4 300 aa10.22□□□□□ -0.77
VPS28-211ENST00000530790 PEF1Q9UBV8 284 aaKnown RBP10.22□□□□□ -0.77
VPS28-211ENST00000530790 SMAD5-AS1Q9Y6J3 95 aa10.22□□□□□ -0.77
VPS28-211ENST00000530790 TRIM64CA6NLI5 447 aa10.21□□□□□ -0.77
VPS28-211ENST00000530790 NHLRC4P0CG21 123 aaPredicted RBP10.21□□□□□ -0.77
VPS28-211ENST00000530790 GP9P14770 177 aa10.21□□□□□ -0.77
VPS28-211ENST00000530790 MAS1LP35410 378 aa10.21□□□□□ -0.77
VPS28-211ENST00000530790 RPL27AP46776 148 aaKnown RBP10.21□□□□□ -0.77
VPS28-211ENST00000530790 EXOSC2Q13868 293 aaKnown RBP10.21□□□□□ -0.77
VPS28-211ENST00000530790 SSX9Q7RTT3 188 aa10.21□□□□□ -0.77
VPS28-211ENST00000530790 SLC25A42Q86VD7 318 aa10.21□□□□□ -0.77
VPS28-211ENST00000530790 ANKRD13BQ86YJ7 626 aa10.21□□□□□ -0.77
VPS28-211ENST00000530790 SPAG16Q8N0X2 631 aa10.21□□□□□ -0.77
VPS28-211ENST00000530790 PUSL1Q8N0Z8 303 aaKnown RBP10.21□□□□□ -0.77
VPS28-211ENST00000530790 TMEM167AQ8TBQ9 72 aa10.21□□□□□ -0.77
VPS28-211ENST00000530790 GIMAP1Q8WWP7 306 aa10.21□□□□□ -0.77
VPS28-211ENST00000530790 BORCS5Q969J3 196 aa10.21□□□□□ -0.77
VPS28-211ENST00000530790 AIFM2Q9BRQ8 373 aa10.21□□□□□ -0.77
VPS28-211ENST00000530790 FUNDC2Q9BWH2 189 aa10.21□□□□□ -0.77
VPS28-211ENST00000530790 DPPA5A6NC42 116 aa10.2□□□□□ -0.78
VPS28-211ENST00000530790 SULT1C2O00338 296 aa10.2□□□□□ -0.78
VPS28-211ENST00000530790 RBFOX2O43251 390 aaKnown RBP eCLIP10.2□□□□□ -0.78
VPS28-211ENST00000530790 TRBV12-3P01733 135 aa10.2□□□□□ -0.78
VPS28-211ENST00000530790 PRH1P02810 166 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms