RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 OR8J1Q8NGP2 316 aa4.99□□□□□ -1.61
CSDE1-213ENST00000530784 OR2G2Q8NGZ5 317 aa4.99□□□□□ -1.61
CSDE1-213ENST00000530784 COQ2Q96H96 371 aa4.99□□□□□ -1.61
CSDE1-213ENST00000530784 NOL4LQ96MY1 436 aaPredicted RBP4.99□□□□□ -1.61
CSDE1-213ENST00000530784 SPACA5Q96QH8 159 aa4.99□□□□□ -1.61
CSDE1-213ENST00000530784 RAB40CQ96S21 281 aa4.99□□□□□ -1.61
CSDE1-213ENST00000530784 MBOAT4Q96T53 435 aa4.99□□□□□ -1.61
CSDE1-213ENST00000530784 P2RX4Q99571 388 aa4.99□□□□□ -1.61
CSDE1-213ENST00000530784 CIB1Q99828 191 aa4.99□□□□□ -1.61
CSDE1-213ENST00000530784 GABARAPL1Q9H0R8 117 aa4.99□□□□□ -1.61
CSDE1-213ENST00000530784 RIBC2Q9H4K1 309 aa4.99□□□□□ -1.61
CSDE1-213ENST00000530784 CALYQ9NYX4 217 aa4.99□□□□□ -1.61
CSDE1-213ENST00000530784 MEIKINA0A087WXM9 373 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 DAPL1A0PJW8 107 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 H0YHG0 523 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 H0YJX3 145 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 RAMP3O60896 148 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 IGKV1D-33P01593 117 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 IGKV1-33P01594 117 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 IGHV3-7P01780 117 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 HTR1AP08908 422 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 DBTP11182 482 aaKnown RBP4.98□□□□□ -1.61
CSDE1-213ENST00000530784 FASP25445 335 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 POLR2IP36954 125 aaKnown RBP4.98□□□□□ -1.61
CSDE1-213ENST00000530784 GNG10P50151 68 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 RAB7AP51149 207 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 RAB25P57735 213 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 MADCAM1Q13477 382 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 CDK5R1Q15078 307 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 LTC4SQ16873 150 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 C17orf58Q2M2W7 97 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 AARDQ4LEZ3 155 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 PAN3Q58A45 887 aaKnown RBP4.98□□□□□ -1.61
CSDE1-213ENST00000530784 UTF1Q5T230 341 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 Q6P435 159 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 STPG2Q8N412 459 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 DRAM1Q8N682 238 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 ZNF565Q8N9K5 539 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 OR51A4Q8NGJ6 313 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 OR51T1Q8NGJ9 327 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 OR10X1Q8NGY0 326 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 OR10AC1Q8NH08 325 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 LEAP2Q969E1 77 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 CPNE2Q96FN4 548 aaPredicted RBP4.98□□□□□ -1.61
CSDE1-213ENST00000530784 GABARAPL3Q9BY60 117 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 SLC5A7Q9GZV3 580 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 IMPAD1Q9NX62 359 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 IDI2-AS1Q9NZ38 188 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 KIF25Q9UIL4 384 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 LINC00527Q9UJ94 153 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 PSG11Q9UQ72 335 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 FOXA2Q9Y261 457 aaPredicted RBP4.98□□□□□ -1.61
CSDE1-213ENST00000530784 U3KQK5 164 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 NBEAL2Q6ZNJ1 2754 aa4.98□□□□□ -1.61
CSDE1-213ENST00000530784 HSD17B6O14756 317 aa4.97□□□□□ -1.61
CSDE1-213ENST00000530784 SULT1B1O43704 296 aa4.97□□□□□ -1.61
CSDE1-213ENST00000530784 IGHG2P01859 326 aa4.97□□□□□ -1.61
CSDE1-213ENST00000530784 CGB3P0DN86 165 aa4.97□□□□□ -1.61
CSDE1-213ENST00000530784 CGB7P0DN87 165 aa4.97□□□□□ -1.61
CSDE1-213ENST00000530784 DIAPH2-AS1Q14236 149 aa4.97□□□□□ -1.61
CSDE1-213ENST00000530784 KISS1Q15726 138 aa4.97□□□□□ -1.61
CSDE1-213ENST00000530784 DDI2Q5TDH0 399 aa4.97□□□□□ -1.61
CSDE1-213ENST00000530784 ZNF691Q5VV52 312 aa4.97□□□□□ -1.61
CSDE1-213ENST00000530784 LPCAT4Q643R3 524 aa4.97□□□□□ -1.61
CSDE1-213ENST00000530784 SAMD12Q8N8I0 201 aa4.97□□□□□ -1.61
CSDE1-213ENST00000530784 OR10A7Q8NGE5 316 aa4.97□□□□□ -1.61
CSDE1-213ENST00000530784 OR8U1Q8NH10 309 aa4.97□□□□□ -1.61
CSDE1-213ENST00000530784 HAVCR2Q8TDQ0 301 aa4.97□□□□□ -1.61
CSDE1-213ENST00000530784 MRPL48Q96GC5 212 aaKnown RBP4.97□□□□□ -1.61
CSDE1-213ENST00000530784 C4orf36Q96KX1 117 aa4.97□□□□□ -1.61
CSDE1-213ENST00000530784 OSBPL10Q9BXB5 764 aa4.97□□□□□ -1.61
CSDE1-213ENST00000530784 GON7Q9BXV9 100 aa4.97□□□□□ -1.61
CSDE1-213ENST00000530784 NCOR1P1Q9H4R4 102 aa4.97□□□□□ -1.61
CSDE1-213ENST00000530784 AP4S1Q9Y587 144 aa4.97□□□□□ -1.61
CSDE1-213ENST00000530784 RYR3Q15413 4870 aa4.97□□□□□ -1.61
CSDE1-213ENST00000530784 A0A1W2PPE3 182 aa4.96□□□□□ -1.62
CSDE1-213ENST00000530784 OR4C45A6NMZ5 311 aa4.96□□□□□ -1.62
CSDE1-213ENST00000530784 NCBP2LA6PVI3 153 aaKnown RBP4.96□□□□□ -1.62
CSDE1-213ENST00000530784 J3QLW9 94 aa4.96□□□□□ -1.62
CSDE1-213ENST00000530784 CCRL2O00421 344 aa4.96□□□□□ -1.62
CSDE1-213ENST00000530784 MAGEB3O15480 346 aa4.96□□□□□ -1.62
CSDE1-213ENST00000530784 MPZL2O60487 215 aa4.96□□□□□ -1.62
CSDE1-213ENST00000530784 GAPDHP04406 335 aaKnown RBP4.96□□□□□ -1.62
CSDE1-213ENST00000530784 RPSAP08865 295 aaKnown RBP4.96□□□□□ -1.62
CSDE1-213ENST00000530784 ZNF19P17023 458 aa4.96□□□□□ -1.62
CSDE1-213ENST00000530784 VDAC1P21796 283 aa4.96□□□□□ -1.62
CSDE1-213ENST00000530784 SSTR5P35346 364 aa4.96□□□□□ -1.62
CSDE1-213ENST00000530784 REG1BP48304 166 aa4.96□□□□□ -1.62
CSDE1-213ENST00000530784 KCNJ3P48549 501 aa4.96□□□□□ -1.62
CSDE1-213ENST00000530784 PAX5Q02548 391 aa4.96□□□□□ -1.62
CSDE1-213ENST00000530784 ZNF816Q0VGE8 651 aaPredicted RBP4.96□□□□□ -1.62
CSDE1-213ENST00000530784 ZSCAN26Q16670 478 aa4.96□□□□□ -1.62
CSDE1-213ENST00000530784 DEFB136Q30KP8 78 aa4.96□□□□□ -1.62
CSDE1-213ENST00000530784 RSBN1Q5VWQ0 802 aaPredicted RBP4.96□□□□□ -1.62
CSDE1-213ENST00000530784 ELP2Q6IA86 826 aa4.96□□□□□ -1.62
CSDE1-213ENST00000530784 MOB3BQ86TA1 216 aa4.96□□□□□ -1.62
CSDE1-213ENST00000530784 TGIF2LXQ8IUE1 241 aa4.96□□□□□ -1.62
CSDE1-213ENST00000530784 SERPINA12Q8IW75 414 aa4.96□□□□□ -1.62
CSDE1-213ENST00000530784 ACBD7Q8N6N7 88 aa4.96□□□□□ -1.62
CSDE1-213ENST00000530784 PXT1Q8NFP0 134 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms