RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 THYN1Q9P016 225 aa11.88□□□□□ -0.51
PCF11-204ENST00000530660 NPIPB13A6NJU9 1138 aa11.87□□□□□ -0.51
PCF11-204ENST00000530660 NPIPB4C9JG80 1138 aa11.87□□□□□ -0.51
PCF11-204ENST00000530660 TNFSF15O95150 251 aa11.87□□□□□ -0.51
PCF11-204ENST00000530660 SLC25A6P12236 298 aa11.87□□□□□ -0.51
PCF11-204ENST00000530660 EDDM3BP56851 147 aa11.87□□□□□ -0.51
PCF11-204ENST00000530660 SLC25A34Q6PIV7 304 aa11.87□□□□□ -0.51
PCF11-204ENST00000530660 TMEM92Q6UXU6 159 aa11.87□□□□□ -0.51
PCF11-204ENST00000530660 RNASE7Q9H1E1 156 aaKnown RBP11.87□□□□□ -0.51
PCF11-204ENST00000530660 DEPPQ9NTK1 212 aa11.87□□□□□ -0.51
PCF11-204ENST00000530660 TMEM38BQ9NVV0 291 aa11.87□□□□□ -0.51
PCF11-204ENST00000530660 TRAV26-1A0A087WT03 109 aa11.87□□□□□ -0.51
PCF11-204ENST00000530660 A0A1W2PQF6 199 aa11.87□□□□□ -0.51
PCF11-204ENST00000530660 SNAI2O43623 268 aa11.87□□□□□ -0.51
PCF11-204ENST00000530660 LINC00869P0C866 280 aa11.87□□□□□ -0.51
PCF11-204ENST00000530660 ARL14EPLP0DKL9 152 aa11.87□□□□□ -0.51
PCF11-204ENST00000530660 FOXL2P58012 376 aa11.87□□□□□ -0.51
PCF11-204ENST00000530660 SLAQ13239 276 aa11.87□□□□□ -0.51
PCF11-204ENST00000530660 YAF2Q8IY57 180 aa11.87□□□□□ -0.51
PCF11-204ENST00000530660 OR4A5Q8NH83 315 aa11.87□□□□□ -0.51
PCF11-204ENST00000530660 NINJ1Q92982 152 aa11.87□□□□□ -0.51
PCF11-204ENST00000530660 HS3ST6Q96QI5 342 aa11.87□□□□□ -0.51
PCF11-204ENST00000530660 MCRIP2Q9BUT9 160 aaKnown RBP11.87□□□□□ -0.51
PCF11-204ENST00000530660 TMEM147Q9BVK8 224 aa11.87□□□□□ -0.51
PCF11-204ENST00000530660 WDR54Q9H977 334 aa11.87□□□□□ -0.51
PCF11-204ENST00000530660 SH2D7A6NKC9 451 aaPredicted RBP11.86□□□□□ -0.51
PCF11-204ENST00000530660 TSTD1Q8NFU3 115 aa11.86□□□□□ -0.51
PCF11-204ENST00000530660 OR10W1Q8NGF6 305 aa11.86□□□□□ -0.51
PCF11-204ENST00000530660 SLC25A40Q8TBP6 338 aa11.86□□□□□ -0.51
PCF11-204ENST00000530660 JMJD8Q96S16 334 aa11.86□□□□□ -0.51
PCF11-204ENST00000530660 RNF208Q9H0X6 261 aa11.86□□□□□ -0.51
PCF11-204ENST00000530660 RRHO14718 337 aa11.86□□□□□ -0.51
PCF11-204ENST00000530660 NTSR1P30989 418 aa11.86□□□□□ -0.51
PCF11-204ENST00000530660 UQCRFS1P47985 274 aa11.86□□□□□ -0.51
PCF11-204ENST00000530660 RAB9AP51151 201 aa11.86□□□□□ -0.51
PCF11-204ENST00000530660 CX3CL1P78423 397 aa11.86□□□□□ -0.51
PCF11-204ENST00000530660 RNASEKQ6P5S7 137 aaKnown RBP11.86□□□□□ -0.51
PCF11-204ENST00000530660 STXBP6Q8NFX7 210 aa11.86□□□□□ -0.51
PCF11-204ENST00000530660 CPT1CQ8TCG5 803 aa11.86□□□□□ -0.51
PCF11-204ENST00000530660 PLEK2Q9NYT0 353 aa11.86□□□□□ -0.51
PCF11-204ENST00000530660 TECRQ9NZ01 308 aaKnown RBP11.86□□□□□ -0.51
PCF11-204ENST00000530660 IL36RNQ9UBH0 155 aa11.86□□□□□ -0.51
PCF11-204ENST00000530660 C19orf25Q9UFG5 118 aaPredicted RBP11.86□□□□□ -0.51
PCF11-204ENST00000530660 KIR2DS5A0A0G2JLQ3 304 aa11.86□□□□□ -0.51
PCF11-204ENST00000530660 A0A0G2JNG1 304 aa11.86□□□□□ -0.51
PCF11-204ENST00000530660 J3QR06 171 aa11.86□□□□□ -0.51
PCF11-204ENST00000530660 KIR2DS3K7RE56 304 aa11.86□□□□□ -0.51
PCF11-204ENST00000530660 MT-ND6P03923 174 aa11.86□□□□□ -0.51
PCF11-204ENST00000530660 KIR2DS5Q14953 304 aa11.86□□□□□ -0.51
PCF11-204ENST00000530660 SPINK9Q5DT21 86 aa11.86□□□□□ -0.51
PCF11-204ENST00000530660 DOLPP1Q86YN1 238 aa11.86□□□□□ -0.51
PCF11-204ENST00000530660 SCCPDHQ8NBX0 429 aa11.86□□□□□ -0.51
PCF11-204ENST00000530660 ATP6V0BQ99437 205 aa11.86□□□□□ -0.51
PCF11-204ENST00000530660 PLSCR4Q9NRQ2 329 aa11.86□□□□□ -0.51
PCF11-204ENST00000530660 CLCF1Q9UBD9 225 aa11.86□□□□□ -0.51
PCF11-204ENST00000530660 YTHDF2Q9Y5A9 579 aaKnown RBP11.86□□□□□ -0.51
PCF11-204ENST00000530660 OR51B2Q9Y5P1 312 aa11.86□□□□□ -0.51
PCF11-204ENST00000530660 A0A1W2PPV4 95 aa11.85□□□□□ -0.51
PCF11-204ENST00000530660 KIAA0895LQ68EN5 471 aa11.85□□□□□ -0.51
PCF11-204ENST00000530660 OR2T6Q8NHC8 308 aa11.85□□□□□ -0.51
PCF11-204ENST00000530660 OR2D2Q9H210 308 aa11.85□□□□□ -0.51
PCF11-204ENST00000530660 HS3ST3A1Q9Y663 406 aa11.85□□□□□ -0.51
PCF11-204ENST00000530660 ABCA7Q8IZY2 2146 aa11.85□□□□□ -0.51
PCF11-204ENST00000530660 GUCA1AP43080 201 aaPredicted RBP11.85□□□□□ -0.51
PCF11-204ENST00000530660 CRYBA4P53673 196 aa11.85□□□□□ -0.51
PCF11-204ENST00000530660 OR10G3Q8NGC4 313 aa11.85□□□□□ -0.51
PCF11-204ENST00000530660 IL1F10Q8WWZ1 152 aa11.85□□□□□ -0.51
PCF11-204ENST00000530660 ALKBH4Q9NXW9 302 aa11.85□□□□□ -0.51
PCF11-204ENST00000530660 APCSP02743 223 aa11.85□□□□□ -0.51
PCF11-204ENST00000530660 MNX1P50219 401 aaPredicted RBP11.85□□□□□ -0.51
PCF11-204ENST00000530660 PCSK4Q6UW60 755 aa11.85□□□□□ -0.51
PCF11-204ENST00000530660 LINC00173Q6ZV60 143 aa11.85□□□□□ -0.51
PCF11-204ENST00000530660 NEGR1Q7Z3B1 354 aa11.85□□□□□ -0.51
PCF11-204ENST00000530660 EAF1Q96JC9 268 aaPredicted RBP11.85□□□□□ -0.51
PCF11-204ENST00000530660 MGST1P10620 155 aaKnown RBP11.84□□□□□ -0.51
PCF11-204ENST00000530660 GDF1P27539 372 aa11.84□□□□□ -0.51
PCF11-204ENST00000530660 GFERP55789 205 aa11.84□□□□□ -0.51
PCF11-204ENST00000530660 ZNF585BQ52M93 769 aa11.84□□□□□ -0.51
PCF11-204ENST00000530660 C20orf204Q6ZNR8 217 aa11.84□□□□□ -0.51
PCF11-204ENST00000530660 GJC3Q8NFK1 279 aa11.84□□□□□ -0.51
PCF11-204ENST00000530660 ST20Q9HBF5 79 aa11.84□□□□□ -0.51
PCF11-204ENST00000530660 IGKV3D-11A0A0A0MRZ8 115 aa11.84□□□□□ -0.51
PCF11-204ENST00000530660 IGHV5-51A0A0C4DH38 117 aa11.84□□□□□ -0.51
PCF11-204ENST00000530660 ZNF207O43670 478 aaKnown RBP11.84□□□□□ -0.51
PCF11-204ENST00000530660 CA1P00915 261 aaPredicted RBP11.84□□□□□ -0.51
PCF11-204ENST00000530660 PTGDSP41222 190 aa11.84□□□□□ -0.51
PCF11-204ENST00000530660 CNN3Q15417 329 aaKnown RBP11.84□□□□□ -0.51
PCF11-204ENST00000530660 UBALD1Q8TB05 177 aa11.84□□□□□ -0.51
PCF11-204ENST00000530660 LSM10Q969L4 123 aaKnown RBP11.84□□□□□ -0.51
PCF11-204ENST00000530660 ZDHHC16Q969W1 377 aa11.84□□□□□ -0.51
PCF11-204ENST00000530660 GUCD1Q96NT3 240 aa11.84□□□□□ -0.51
PCF11-204ENST00000530660 COMMD5Q9GZQ3 224 aa11.84□□□□□ -0.51
PCF11-204ENST00000530660 WDR87Q6ZQQ6 2873 aa11.84□□□□□ -0.51
PCF11-204ENST00000530660 C3orf80F5H4A9 247 aa11.83□□□□□ -0.52
PCF11-204ENST00000530660 H3BUT2 72 aa11.83□□□□□ -0.52
PCF11-204ENST00000530660 PLP1P60201 277 aa11.83□□□□□ -0.52
PCF11-204ENST00000530660 GTF2H5Q6ZYL4 71 aa11.83□□□□□ -0.52
PCF11-204ENST00000530660 IGHV3-20A0A0C4DH32 117 aa11.83□□□□□ -0.52
PCF11-204ENST00000530660 WDR82Q6UXN9 313 aa11.83□□□□□ -0.52
PCF11-204ENST00000530660 TMEM70Q9BUB7 260 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms