RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 RBMXL3Q8N7X1 1067 aaKnown RBP9.69□□□□□ -0.86
USP35-207ENST00000530546 PCGF1Q9BSM1 259 aa9.69□□□□□ -0.86
USP35-207ENST00000530546 TRBV6-6A0A0A6YYG2 114 aa9.68□□□□□ -0.86
USP35-207ENST00000530546 K7EP13 123 aa9.68□□□□□ -0.86
USP35-207ENST00000530546 LCN2P80188 198 aa9.68□□□□□ -0.86
USP35-207ENST00000530546 Q6ZS92 163 aa9.68□□□□□ -0.86
USP35-207ENST00000530546 TPRX1Q8N7U7 411 aa9.68□□□□□ -0.86
USP35-207ENST00000530546 OR10V1Q8NGI7 309 aa9.68□□□□□ -0.86
USP35-207ENST00000530546 OR2T10Q8NGZ9 312 aa9.68□□□□□ -0.86
USP35-207ENST00000530546 TMEM56Q96MV1 263 aa9.68□□□□□ -0.86
USP35-207ENST00000530546 SMIM7Q9BQ49 75 aa9.68□□□□□ -0.86
USP35-207ENST00000530546 CXXC4Q9H2H0 198 aa9.68□□□□□ -0.86
USP35-207ENST00000530546 GSX1Q9H4S2 264 aaPredicted RBP9.68□□□□□ -0.86
USP35-207ENST00000530546 TAAR3PQ9P1P4 343 aa9.68□□□□□ -0.86
USP35-207ENST00000530546 FAM215AQ9Y5M1 114 aa9.68□□□□□ -0.86
USP35-207ENST00000530546 TMEM56-RWDD3S4R434 201 aa9.68□□□□□ -0.86
USP35-207ENST00000530546 PSG2P11465 335 aa9.68□□□□□ -0.86
USP35-207ENST00000530546 AESQ08117 197 aa9.68□□□□□ -0.86
USP35-207ENST00000530546 ZNF146Q15072 292 aa9.68□□□□□ -0.86
USP35-207ENST00000530546 ZNF474Q6S9Z5 364 aaPredicted RBP9.68□□□□□ -0.86
USP35-207ENST00000530546 LRP11Q86VZ4 500 aa9.68□□□□□ -0.86
USP35-207ENST00000530546 C11orf53Q8IXP5 236 aa9.68□□□□□ -0.86
USP35-207ENST00000530546 ZNF665Q9H7R5 613 aa9.68□□□□□ -0.86
USP35-207ENST00000530546 APC2O95996 2303 aa9.67□□□□□ -0.86
USP35-207ENST00000530546 MBD3L4A6NDZ8 208 aaPredicted RBP9.67□□□□□ -0.86
USP35-207ENST00000530546 MBD3L3A6NE82 208 aaPredicted RBP9.67□□□□□ -0.86
USP35-207ENST00000530546 MBD3L5A6NJ08 208 aaPredicted RBP9.67□□□□□ -0.86
USP35-207ENST00000530546 KBTBD11O94819 623 aa9.67□□□□□ -0.86
USP35-207ENST00000530546 SERPINE2P07093 398 aa9.67□□□□□ -0.86
USP35-207ENST00000530546 F2RP25116 425 aa9.67□□□□□ -0.86
USP35-207ENST00000530546 UCP1P25874 307 aa9.67□□□□□ -0.86
USP35-207ENST00000530546 S100GP29377 79 aa9.67□□□□□ -0.86
USP35-207ENST00000530546 MDH2P40926 338 aaKnown RBP9.67□□□□□ -0.86
USP35-207ENST00000530546 KLF3P57682 345 aaPredicted RBP9.67□□□□□ -0.86
USP35-207ENST00000530546 NECAP1Q8NC96 275 aa9.67□□□□□ -0.86
USP35-207ENST00000530546 OR2Z1Q8NG97 314 aa9.67□□□□□ -0.86
USP35-207ENST00000530546 MBD3L2Q8NHZ7 208 aaPredicted RBP9.67□□□□□ -0.86
USP35-207ENST00000530546 RNASE8Q8TDE3 154 aaKnown RBP9.67□□□□□ -0.86
USP35-207ENST00000530546 SLC35E1Q96K37 410 aa9.67□□□□□ -0.86
USP35-207ENST00000530546 COL25A1Q9BXS0 654 aaPredicted RBP9.67□□□□□ -0.86
USP35-207ENST00000530546 RBKSQ9H477 322 aa9.67□□□□□ -0.86
USP35-207ENST00000530546 METRNQ9UJH8 293 aa9.67□□□□□ -0.86
USP35-207ENST00000530546 YPEL1O60688 119 aa9.67□□□□□ -0.86
USP35-207ENST00000530546 CHRNB4P30926 498 aa9.67□□□□□ -0.86
USP35-207ENST00000530546 NBL1P41271 181 aa9.67□□□□□ -0.86
USP35-207ENST00000530546 TESK1Q15569 626 aa9.67□□□□□ -0.86
USP35-207ENST00000530546 KCNIP4Q6PIL6 250 aa9.67□□□□□ -0.86
USP35-207ENST00000530546 IGFL3Q6UXB1 125 aa9.67□□□□□ -0.86
USP35-207ENST00000530546 OR1L1Q8NH94 360 aa9.67□□□□□ -0.86
USP35-207ENST00000530546 ORAOV1Q8WV07 137 aa9.67□□□□□ -0.86
USP35-207ENST00000530546 YPEL2Q96QA6 119 aa9.67□□□□□ -0.86
USP35-207ENST00000530546 TMEM106BQ9NUM4 274 aa9.67□□□□□ -0.86
USP35-207ENST00000530546 SLC25A15Q9Y619 301 aa9.67□□□□□ -0.86
USP35-207ENST00000530546 CACNA1DQ01668 2161 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 A0A0G2JRQ6 117 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 A0A1W2PN81 502 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 IFNA5P01569 189 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 IGLV1-44P01699 117 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 CHRNA7P36544 502 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 GABRA2P47869 451 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 MSMPQ1L6U9 139 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 WDR82Q6UXN9 313 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 SDSLQ96GA7 329 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 PIEZO2Q9H5I5 2752 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 ACACAQ13085 2346 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 ICE1Q9Y2F5 2266 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 ANKRD11Q6UB99 2663 aaPredicted RBP9.66□□□□□ -0.86
USP35-207ENST00000530546 NKX6-3A6NJ46 265 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 CEBPZOSA8MTT3 80 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 H0Y980 276 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 CST7O76096 145 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 VDAC1P21796 283 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 C1orf185Q5T7R7 199 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 TOMM20LQ6UXN7 152 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 ASCL5Q7RTU5 278 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 ODF3L1Q8IXM7 274 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 LRFN3Q9BTN0 628 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 KCNIP1Q9NZI2 227 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 DUXBA0A1W2PPF3 345 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 CLEC18AA5D8T8 446 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 RPL23P62829 140 aaKnown RBP9.66□□□□□ -0.86
USP35-207ENST00000530546 PAFAH1B2P68402 229 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 FOXC1Q12948 553 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 BATFQ16520 125 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 ACP7Q6ZNF0 438 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 MOB1BQ7L9L4 216 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 CLEC18CQ8NCF0 446 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 MRGPRDQ8TDS7 321 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 LRRC29Q8WV35 223 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 VAMP8Q9BV40 100 aa9.66□□□□□ -0.86
USP35-207ENST00000530546 TMEM30CPA0ZSE6 113 aa9.65□□□□□ -0.86
USP35-207ENST00000530546 TMEM250H0YL14 139 aa9.65□□□□□ -0.86
USP35-207ENST00000530546 H3BP45 60 aa9.65□□□□□ -0.86
USP35-207ENST00000530546 DLL1O00548 723 aa9.65□□□□□ -0.86
USP35-207ENST00000530546 KITLGP21583 273 aa9.65□□□□□ -0.86
USP35-207ENST00000530546 EDDM3AQ14507 147 aa9.65□□□□□ -0.86
USP35-207ENST00000530546 LTC4SQ16873 150 aa9.65□□□□□ -0.86
USP35-207ENST00000530546 NMSQ5H8A3 153 aa9.65□□□□□ -0.86
USP35-207ENST00000530546 TPTE2P1Q5T6R2 138 aa9.65□□□□□ -0.86
USP35-207ENST00000530546 ZNF808Q8N4W9 903 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms